RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TMF1P82094 1093 aa17.21■□□□□ 0.35
USP11-204ENST00000377107 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
USP11-204ENST00000377107 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
USP11-204ENST00000377107 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
USP11-204ENST00000377107 SKAP1Q86WV1 359 aa17.19■□□□□ 0.34
USP11-204ENST00000377107 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
USP11-204ENST00000377107 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
USP11-204ENST00000377107 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
USP11-204ENST00000377107 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
USP11-204ENST00000377107 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
USP11-204ENST00000377107 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
USP11-204ENST00000377107 RRP1P56182 461 aaKnown RBP17.17■□□□□ 0.34
USP11-204ENST00000377107 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 NUP160Q12769 1436 aa17.16■□□□□ 0.34
USP11-204ENST00000377107 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
USP11-204ENST00000377107 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
USP11-204ENST00000377107 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
USP11-204ENST00000377107 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
USP11-204ENST00000377107 KIF3BO15066 747 aa17.14■□□□□ 0.33
USP11-204ENST00000377107 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
USP11-204ENST00000377107 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
USP11-204ENST00000377107 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
USP11-204ENST00000377107 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
USP11-204ENST00000377107 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
USP11-204ENST00000377107 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
USP11-204ENST00000377107 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
USP11-204ENST00000377107 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
USP11-204ENST00000377107 MBD5Q9P267 1494 aa17.1■□□□□ 0.33
USP11-204ENST00000377107 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
USP11-204ENST00000377107 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
USP11-204ENST00000377107 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
USP11-204ENST00000377107 BCL11AQ9H165 835 aa17.08■□□□□ 0.33
USP11-204ENST00000377107 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
USP11-204ENST00000377107 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
USP11-204ENST00000377107 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
USP11-204ENST00000377107 KDM5CP41229 1560 aa17.07■□□□□ 0.32
USP11-204ENST00000377107 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
USP11-204ENST00000377107 TESK2Q96S53 571 aa17.07■□□□□ 0.32
USP11-204ENST00000377107 ADGBQ8N7X0 1667 aa17.07■□□□□ 0.32
USP11-204ENST00000377107 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
USP11-204ENST00000377107 CDC42BPAQ5VT25 1732 aa17.06■□□□□ 0.32
USP11-204ENST00000377107 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
USP11-204ENST00000377107 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
USP11-204ENST00000377107 ABCA8O94911 1581 aa17.05■□□□□ 0.32
USP11-204ENST00000377107 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 GGT6Q6P531 493 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 ERBINQ96RT1 1412 aa17.03■□□□□ 0.32
USP11-204ENST00000377107 RGS3P49796 1198 aa17.02■□□□□ 0.31
USP11-204ENST00000377107 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
USP11-204ENST00000377107 SAFB2Q14151 953 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP11-204ENST00000377107 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
USP11-204ENST00000377107 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
USP11-204ENST00000377107 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
USP11-204ENST00000377107 A2MP01023 1474 aa17■□□□□ 0.31
USP11-204ENST00000377107 PPP2R1AP30153 589 aa17■□□□□ 0.31
USP11-204ENST00000377107 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 PDE4AP27815 886 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 APAF1O14727 1248 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
USP11-204ENST00000377107 TRAK1Q9UPV9 953 aa16.99■□□□□ 0.31
USP11-204ENST00000377107 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
USP11-204ENST00000377107 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
USP11-204ENST00000377107 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 PARD3Q8TEW0 1356 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
USP11-204ENST00000377107 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
USP11-204ENST00000377107 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
USP11-204ENST00000377107 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
USP11-204ENST00000377107 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
USP11-204ENST00000377107 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
USP11-204ENST00000377107 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
USP11-204ENST00000377107 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
USP11-204ENST00000377107 TMEM132EQ6IEE7 984 aa16.94■□□□□ 0.3
USP11-204ENST00000377107 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
USP11-204ENST00000377107 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
USP11-204ENST00000377107 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP11-204ENST00000377107 KANK1Q14678 1352 aa16.93■□□□□ 0.3
USP11-204ENST00000377107 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
USP11-204ENST00000377107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
USP11-204ENST00000377107 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
USP11-204ENST00000377107 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
USP11-204ENST00000377107 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
USP11-204ENST00000377107 STK26Q9P289 416 aa16.89■□□□□ 0.29
USP11-204ENST00000377107 BCAR3O75815 825 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 NEFMP07197 916 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 AMER1Q5JTC6 1135 aaPredicted RBP16.88■□□□□ 0.29
USP11-204ENST00000377107 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
USP11-204ENST00000377107 ARHGEF5Q12774 1597 aa16.87■□□□□ 0.29
USP11-204ENST00000377107 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
USP11-204ENST00000377107 PLCH2O75038 1416 aa16.87■□□□□ 0.29
USP11-204ENST00000377107 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
USP11-204ENST00000377107 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms