RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 PLXNC1O60486 1568 aa21.23■□□□□ 0.99
CCHCR1-201ENST00000376266 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
CCHCR1-201ENST00000376266 MAGI2Q86UL8 1455 aa21.22■□□□□ 0.99
CCHCR1-201ENST00000376266 ABCA6Q8N139 1617 aa21.21■□□□□ 0.99
CCHCR1-201ENST00000376266 ANKRD50Q9ULJ7 1429 aa21.19■□□□□ 0.98
CCHCR1-201ENST00000376266 RAB3GAP2Q9H2M9 1393 aa21.19■□□□□ 0.98
CCHCR1-201ENST00000376266 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
CCHCR1-201ENST00000376266 GCC2Q8IWJ2 1684 aa21.18■□□□□ 0.98
CCHCR1-201ENST00000376266 DUOX2Q9NRD8 1548 aa21.17■□□□□ 0.98
CCHCR1-201ENST00000376266 NEFLP07196 543 aa21.17■□□□□ 0.98
CCHCR1-201ENST00000376266 DHX29Q7Z478 1369 aaKnown RBP21.16■□□□□ 0.98
CCHCR1-201ENST00000376266 A2MP01023 1474 aa21.16■□□□□ 0.98
CCHCR1-201ENST00000376266 ATP10AO60312 1499 aa21.14■□□□□ 0.98
CCHCR1-201ENST00000376266 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.97
CCHCR1-201ENST00000376266 ERBINQ96RT1 1412 aa21.12■□□□□ 0.97
CCHCR1-201ENST00000376266 KIF3BO15066 747 aa21.11■□□□□ 0.97
CCHCR1-201ENST00000376266 TRIM52Q96A61 297 aa21.08■□□□□ 0.96
CCHCR1-201ENST00000376266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCHCR1-201ENST00000376266 SIGLEC1Q9BZZ2 1709 aa21.06■□□□□ 0.96
CCHCR1-201ENST00000376266 REREQ9P2R6 1566 aa21.04■□□□□ 0.96
CCHCR1-201ENST00000376266 GGT6Q6P531 493 aa21.04■□□□□ 0.96
CCHCR1-201ENST00000376266 MSH5O43196 834 aa21.04■□□□□ 0.96
CCHCR1-201ENST00000376266 ARID4BQ4LE39 1312 aaPredicted RBP21.03■□□□□ 0.96
CCHCR1-201ENST00000376266 EIF2AK4Q9P2K8 1649 aaKnown RBP21.03■□□□□ 0.96
CCHCR1-201ENST00000376266 NUP155O75694 1391 aa21.02■□□□□ 0.95
CCHCR1-201ENST00000376266 MLECQ14165 292 aa21.01■□□□□ 0.95
CCHCR1-201ENST00000376266 AGLP35573 1532 aa20.99■□□□□ 0.95
CCHCR1-201ENST00000376266 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
CCHCR1-201ENST00000376266 UNC13BO14795 1591 aa20.98■□□□□ 0.95
CCHCR1-201ENST00000376266 BCORL1Q5H9F3 1711 aa20.97■□□□□ 0.95
CCHCR1-201ENST00000376266 DEPDC5O75140 1603 aa20.97■□□□□ 0.95
CCHCR1-201ENST00000376266 MROH1Q8NDA8 1641 aa20.96■□□□□ 0.95
CCHCR1-201ENST00000376266 ERICH6Q7L0X2 663 aa20.96■□□□□ 0.95
CCHCR1-201ENST00000376266 RNF17Q9BXT8 1623 aaKnown RBP20.96■□□□□ 0.95
CCHCR1-201ENST00000376266 MPHOSPH9Q99550 1183 aa20.94■□□□□ 0.94
CCHCR1-201ENST00000376266 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
CCHCR1-201ENST00000376266 PRDM15P57071 1507 aaPredicted RBP20.94■□□□□ 0.94
CCHCR1-201ENST00000376266 PZPP20742 1482 aa20.93■□□□□ 0.94
CCHCR1-201ENST00000376266 KANK1Q14678 1352 aa20.93■□□□□ 0.94
CCHCR1-201ENST00000376266 WASHC2CQ9Y4E1 1318 aa20.92■□□□□ 0.94
CCHCR1-201ENST00000376266 FAM135AQ9P2D6 1515 aa20.92■□□□□ 0.94
CCHCR1-201ENST00000376266 KDM5DQ9BY66 1539 aa20.91■□□□□ 0.94
CCHCR1-201ENST00000376266 FANCIQ9NVI1 1328 aa20.9■□□□□ 0.94
CCHCR1-201ENST00000376266 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
CCHCR1-201ENST00000376266 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.94
CCHCR1-201ENST00000376266 FOXD1Q16676 465 aa20.89■□□□□ 0.93
CCHCR1-201ENST00000376266 PKD2Q13563 968 aa20.88■□□□□ 0.93
CCHCR1-201ENST00000376266 ABCC3O15438 1527 aa20.86■□□□□ 0.93
CCHCR1-201ENST00000376266 CEP152O94986 1710 aa20.86■□□□□ 0.93
CCHCR1-201ENST00000376266 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
CCHCR1-201ENST00000376266 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
CCHCR1-201ENST00000376266 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
CCHCR1-201ENST00000376266 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
CCHCR1-201ENST00000376266 ANP32CO43423 234 aa20.82■□□□□ 0.92
CCHCR1-201ENST00000376266 LMTK2Q8IWU2 1503 aa20.82■□□□□ 0.92
CCHCR1-201ENST00000376266 TET3O43151 1660 aa20.81■□□□□ 0.92
CCHCR1-201ENST00000376266 PRKCSHP14314 528 aaPredicted RBP20.81■□□□□ 0.92
CCHCR1-201ENST00000376266 CLTCQ00610 1675 aaKnown RBP20.81■□□□□ 0.92
CCHCR1-201ENST00000376266 ZC3H13Q5T200 1668 aaKnown RBP20.79■□□□□ 0.92
CCHCR1-201ENST00000376266 EFCAB6Q5THR3 1501 aa20.79■□□□□ 0.92
CCHCR1-201ENST00000376266 CAMSAP1Q5T5Y3 1602 aa20.79■□□□□ 0.92
CCHCR1-201ENST00000376266 E9PCH4 1651 aa20.78■□□□□ 0.92
CCHCR1-201ENST00000376266 NPATQ14207 1427 aa20.77■□□□□ 0.92
CCHCR1-201ENST00000376266 ZMYM3Q14202 1370 aa20.76■□□□□ 0.91
CCHCR1-201ENST00000376266 FER1L4A9Z1Z3 1794 aa20.76■□□□□ 0.91
CCHCR1-201ENST00000376266 MADDQ8WXG6 1647 aa20.75■□□□□ 0.91
CCHCR1-201ENST00000376266 CNTLNQ9NXG0 1405 aa20.74■□□□□ 0.91
CCHCR1-201ENST00000376266 CFAP65Q6ZU64 1925 aaKnown RBP20.74■□□□□ 0.91
CCHCR1-201ENST00000376266 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
CCHCR1-201ENST00000376266 FBXO31Q5XUX0 539 aaPredicted RBP20.74■□□□□ 0.91
CCHCR1-201ENST00000376266 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
CCHCR1-201ENST00000376266 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
CCHCR1-201ENST00000376266 CEBPAP49715 358 aaPredicted RBP20.73■□□□□ 0.91
CCHCR1-201ENST00000376266 ARHGAP31Q2M1Z3 1444 aa20.73■□□□□ 0.91
CCHCR1-201ENST00000376266 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
CCHCR1-201ENST00000376266 SIN3AQ96ST3 1273 aa20.72■□□□□ 0.91
CCHCR1-201ENST00000376266 DEKP35659 375 aaKnown RBP20.72■□□□□ 0.91
CCHCR1-201ENST00000376266 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
CCHCR1-201ENST00000376266 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-201ENST00000376266 IRX6P78412 446 aaPredicted RBP20.7■□□□□ 0.9
CCHCR1-201ENST00000376266 RIMS1Q86UR5 1692 aaKnown RBP20.69■□□□□ 0.9
CCHCR1-201ENST00000376266 MROH2AA6NES4 1674 aa20.68■□□□□ 0.9
CCHCR1-201ENST00000376266 PTPRTO14522 1441 aa20.67■□□□□ 0.9
CCHCR1-201ENST00000376266 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
CCHCR1-201ENST00000376266 KDM4FA0A1W2PPD8 638 aa20.66■□□□□ 0.9
CCHCR1-201ENST00000376266 C3P01024 1663 aa20.65■□□□□ 0.9
CCHCR1-201ENST00000376266 NOS1P29475 1434 aa20.65■□□□□ 0.9
CCHCR1-201ENST00000376266 PREX1Q8TCU6 1659 aa20.65■□□□□ 0.9
CCHCR1-201ENST00000376266 ERVK-7P63135 1459 aa20.64■□□□□ 0.9
CCHCR1-201ENST00000376266 UGGT1Q9NYU2 1555 aa20.64■□□□□ 0.89
CCHCR1-201ENST00000376266 CCDC144AA2RUR9 1427 aa20.63■□□□□ 0.89
CCHCR1-201ENST00000376266 TRPM2O94759 1503 aa20.63■□□□□ 0.89
CCHCR1-201ENST00000376266 SYNMO15061 1565 aa20.62■□□□□ 0.89
CCHCR1-201ENST00000376266 TIMELESSQ9UNS1 1208 aa20.62■□□□□ 0.89
CCHCR1-201ENST00000376266 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
CCHCR1-201ENST00000376266 SPATA31D1Q6ZQQ2 1576 aa20.61■□□□□ 0.89
CCHCR1-201ENST00000376266 PTPRMP28827 1452 aa20.61■□□□□ 0.89
CCHCR1-201ENST00000376266 CLTCL1P53675 1640 aa20.59■□□□□ 0.89
CCHCR1-201ENST00000376266 IDI1Q13907 227 aa20.58■□□□□ 0.89
CCHCR1-201ENST00000376266 TNRQ92752 1358 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms