RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 RGS3P49796 1198 aa13.94□□□□□ -0.18
ZNF549-202ENST00000376233 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
ZNF549-202ENST00000376233 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
ZNF549-202ENST00000376233 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
ZNF549-202ENST00000376233 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
ZNF549-202ENST00000376233 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
ZNF549-202ENST00000376233 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
ZNF549-202ENST00000376233 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
ZNF549-202ENST00000376233 RAPGEF6Q8TEU7 1601 aa13.91□□□□□ -0.18
ZNF549-202ENST00000376233 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
ZNF549-202ENST00000376233 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
ZNF549-202ENST00000376233 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
ZNF549-202ENST00000376233 KANK1Q14678 1352 aa13.9□□□□□ -0.18
ZNF549-202ENST00000376233 KIAA0556O60303 1618 aa13.9□□□□□ -0.18
ZNF549-202ENST00000376233 MSH5O43196 834 aa13.89□□□□□ -0.19
ZNF549-202ENST00000376233 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
ZNF549-202ENST00000376233 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
ZNF549-202ENST00000376233 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
ZNF549-202ENST00000376233 ATP10BO94823 1461 aa13.87□□□□□ -0.19
ZNF549-202ENST00000376233 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
ZNF549-202ENST00000376233 PZPP20742 1482 aa13.86□□□□□ -0.19
ZNF549-202ENST00000376233 PDE3BQ13370 1112 aa13.86□□□□□ -0.19
ZNF549-202ENST00000376233 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
ZNF549-202ENST00000376233 CRBNQ96SW2 442 aa13.86□□□□□ -0.19
ZNF549-202ENST00000376233 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
ZNF549-202ENST00000376233 TEX14Q8IWB6 1497 aa13.84□□□□□ -0.19
ZNF549-202ENST00000376233 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
ZNF549-202ENST00000376233 STK26Q9P289 416 aa13.84□□□□□ -0.19
ZNF549-202ENST00000376233 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
ZNF549-202ENST00000376233 SMG6Q86US8 1419 aaKnown RBP13.84□□□□□ -0.19
ZNF549-202ENST00000376233 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
ZNF549-202ENST00000376233 DEKP35659 375 aaKnown RBP13.83□□□□□ -0.2
ZNF549-202ENST00000376233 IPO9Q96P70 1041 aaKnown RBP13.83□□□□□ -0.2
ZNF549-202ENST00000376233 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
ZNF549-202ENST00000376233 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
ZNF549-202ENST00000376233 DENND4BO75064 1496 aaPredicted RBP13.82□□□□□ -0.2
ZNF549-202ENST00000376233 CCDC141Q6ZP82 1450 aa13.82□□□□□ -0.2
ZNF549-202ENST00000376233 APAF1O14727 1248 aa13.82□□□□□ -0.2
ZNF549-202ENST00000376233 CFAP70Q5T0N1 1121 aa13.82□□□□□ -0.2
ZNF549-202ENST00000376233 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
ZNF549-202ENST00000376233 KIF14Q15058 1648 aa13.82□□□□□ -0.2
ZNF549-202ENST00000376233 RRP7AQ9Y3A4 280 aaKnown RBP13.82□□□□□ -0.2
ZNF549-202ENST00000376233 TCERG1O14776 1098 aaKnown RBP13.81□□□□□ -0.2
ZNF549-202ENST00000376233 NEFMP07197 916 aa13.81□□□□□ -0.2
ZNF549-202ENST00000376233 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
ZNF549-202ENST00000376233 PDE4AP27815 886 aa13.8□□□□□ -0.2
ZNF549-202ENST00000376233 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
ZNF549-202ENST00000376233 DHX29Q7Z478 1369 aaKnown RBP13.8□□□□□ -0.2
ZNF549-202ENST00000376233 SKAP1Q86WV1 359 aa13.8□□□□□ -0.2
ZNF549-202ENST00000376233 PLEKHH2Q8IVE3 1493 aa13.79□□□□□ -0.2
ZNF549-202ENST00000376233 PAK3O75914 559 aaPredicted RBP13.79□□□□□ -0.2
ZNF549-202ENST00000376233 GCC2Q8IWJ2 1684 aa13.79□□□□□ -0.2
ZNF549-202ENST00000376233 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
ZNF549-202ENST00000376233 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.2
ZNF549-202ENST00000376233 PPP2R1AP30153 589 aa13.77□□□□□ -0.21
ZNF549-202ENST00000376233 SPATA31E1Q6ZUB1 1445 aa13.77□□□□□ -0.21
ZNF549-202ENST00000376233 POGKQ9P215 609 aa13.76□□□□□ -0.21
ZNF549-202ENST00000376233 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
ZNF549-202ENST00000376233 EIF3AQ14152 1382 aaKnown RBP13.76□□□□□ -0.21
ZNF549-202ENST00000376233 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
ZNF549-202ENST00000376233 ERBINQ96RT1 1412 aa13.76□□□□□ -0.21
ZNF549-202ENST00000376233 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
ZNF549-202ENST00000376233 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
ZNF549-202ENST00000376233 BCL2L13Q9BXK5 485 aa13.75□□□□□ -0.21
ZNF549-202ENST00000376233 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
ZNF549-202ENST00000376233 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
ZNF549-202ENST00000376233 CLUAP1Q96AJ1 413 aa13.75□□□□□ -0.21
ZNF549-202ENST00000376233 DDRGK1Q96HY6 314 aa13.75□□□□□ -0.21
ZNF549-202ENST00000376233 ESF1Q9H501 851 aaKnown RBP13.74□□□□□ -0.21
ZNF549-202ENST00000376233 CEP170Q5SW79 1584 aa13.74□□□□□ -0.21
ZNF549-202ENST00000376233 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
ZNF549-202ENST00000376233 KDM5BQ9UGL1 1544 aa13.73□□□□□ -0.21
ZNF549-202ENST00000376233 ITSN2Q9NZM3 1697 aa13.73□□□□□ -0.21
ZNF549-202ENST00000376233 UPF2Q9HAU5 1272 aaKnown RBP13.73□□□□□ -0.21
ZNF549-202ENST00000376233 RALGAPBQ86X10 1494 aa13.73□□□□□ -0.21
ZNF549-202ENST00000376233 MLECQ14165 292 aa13.73□□□□□ -0.21
ZNF549-202ENST00000376233 ARXQ96QS3 562 aa13.73□□□□□ -0.21
ZNF549-202ENST00000376233 FTSJ3Q8IY81 847 aaKnown RBP13.72□□□□□ -0.21
ZNF549-202ENST00000376233 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
ZNF549-202ENST00000376233 NUP160Q12769 1436 aa13.71□□□□□ -0.21
ZNF549-202ENST00000376233 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
ZNF549-202ENST00000376233 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.22
ZNF549-202ENST00000376233 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
ZNF549-202ENST00000376233 TESK2Q96S53 571 aa13.69□□□□□ -0.22
ZNF549-202ENST00000376233 COG6Q9Y2V7 657 aa13.69□□□□□ -0.22
ZNF549-202ENST00000376233 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
ZNF549-202ENST00000376233 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
ZNF549-202ENST00000376233 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
ZNF549-202ENST00000376233 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
ZNF549-202ENST00000376233 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
ZNF549-202ENST00000376233 CENPJQ9HC77 1338 aaPredicted RBP13.68□□□□□ -0.22
ZNF549-202ENST00000376233 PER1O15534 1290 aaPredicted RBP13.67□□□□□ -0.22
ZNF549-202ENST00000376233 BCAR3O75815 825 aa13.66□□□□□ -0.22
ZNF549-202ENST00000376233 E9PSI1 815 aa13.65□□□□□ -0.22
ZNF549-202ENST00000376233 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
ZNF549-202ENST00000376233 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
ZNF549-202ENST00000376233 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
ZNF549-202ENST00000376233 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
ZNF549-202ENST00000376233 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
ZNF549-202ENST00000376233 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms