RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 ATP10AO60312 1499 aa16.11■□□□□ 0.17
PDPN-202ENST00000376057 RNF17Q9BXT8 1623 aaKnown RBP16.11■□□□□ 0.17
PDPN-202ENST00000376057 PRDM15P57071 1507 aaPredicted RBP16.1■□□□□ 0.17
PDPN-202ENST00000376057 PPP1R15AO75807 674 aaPredicted RBP16.09■□□□□ 0.17
PDPN-202ENST00000376057 FRMPD1Q5SYB0 1578 aa16.09■□□□□ 0.17
PDPN-202ENST00000376057 TONSLQ96HA7 1378 aa16.08■□□□□ 0.16
PDPN-202ENST00000376057 MROH1Q8NDA8 1641 aa16.07■□□□□ 0.16
PDPN-202ENST00000376057 LMTK2Q8IWU2 1503 aa16.07■□□□□ 0.16
PDPN-202ENST00000376057 A2MP01023 1474 aa16.07■□□□□ 0.16
PDPN-202ENST00000376057 TET3O43151 1660 aa16.06■□□□□ 0.16
PDPN-202ENST00000376057 ABCA6Q8N139 1617 aa16.06■□□□□ 0.16
PDPN-202ENST00000376057 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
PDPN-202ENST00000376057 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
PDPN-202ENST00000376057 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
PDPN-202ENST00000376057 PKD2Q13563 968 aa16.05■□□□□ 0.16
PDPN-202ENST00000376057 NEUROD1Q13562 356 aa16.04■□□□□ 0.16
PDPN-202ENST00000376057 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
PDPN-202ENST00000376057 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
PDPN-202ENST00000376057 KANK1Q14678 1352 aa16■□□□□ 0.15
PDPN-202ENST00000376057 E9PCH4 1651 aa16■□□□□ 0.15
PDPN-202ENST00000376057 PTPRTO14522 1441 aa15.99■□□□□ 0.15
PDPN-202ENST00000376057 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
PDPN-202ENST00000376057 FOXD1Q16676 465 aa15.98■□□□□ 0.15
PDPN-202ENST00000376057 TSPOAP1O95153 1857 aa15.98■□□□□ 0.15
PDPN-202ENST00000376057 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
PDPN-202ENST00000376057 TRPM2O94759 1503 aa15.97■□□□□ 0.15
PDPN-202ENST00000376057 AGLP35573 1532 aa15.97■□□□□ 0.15
PDPN-202ENST00000376057 SPHKAPQ2M3C7 1700 aa15.96■□□□□ 0.15
PDPN-202ENST00000376057 EFCAB6Q5THR3 1501 aa15.96■□□□□ 0.15
PDPN-202ENST00000376057 UHRF1BP1Q6BDS2 1440 aa15.96■□□□□ 0.15
PDPN-202ENST00000376057 RAPGEF3O95398 923 aa15.94■□□□□ 0.14
PDPN-202ENST00000376057 L3MBTL2Q969R5 705 aa15.94■□□□□ 0.14
PDPN-202ENST00000376057 CCDC144AA2RUR9 1427 aa15.93■□□□□ 0.14
PDPN-202ENST00000376057 KIF3BO15066 747 aa15.92■□□□□ 0.14
PDPN-202ENST00000376057 CEP152O94986 1710 aa15.92■□□□□ 0.14
PDPN-202ENST00000376057 ARHGEF40Q8TER5 1519 aa15.9■□□□□ 0.14
PDPN-202ENST00000376057 ABCC3O15438 1527 aa15.9■□□□□ 0.14
PDPN-202ENST00000376057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDPN-202ENST00000376057 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
PDPN-202ENST00000376057 YEATS2Q9ULM3 1422 aa15.9■□□□□ 0.14
PDPN-202ENST00000376057 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
PDPN-202ENST00000376057 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
PDPN-202ENST00000376057 CAMSAP1Q5T5Y3 1602 aa15.88■□□□□ 0.13
PDPN-202ENST00000376057 STAC3Q96MF2 364 aa15.88■□□□□ 0.13
PDPN-202ENST00000376057 SPATA31E1Q6ZUB1 1445 aa15.87■□□□□ 0.13
PDPN-202ENST00000376057 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
PDPN-202ENST00000376057 DNAJC5Q9H3Z4 198 aa15.86■□□□□ 0.13
PDPN-202ENST00000376057 CLTCL1P53675 1640 aa15.85■□□□□ 0.13
PDPN-202ENST00000376057 RALGAPBQ86X10 1494 aa15.85■□□□□ 0.13
PDPN-202ENST00000376057 CNTLNQ9NXG0 1405 aa15.84■□□□□ 0.13
PDPN-202ENST00000376057 LAMC1P11047 1609 aa15.84■□□□□ 0.13
PDPN-202ENST00000376057 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
PDPN-202ENST00000376057 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
PDPN-202ENST00000376057 NOS1P29475 1434 aa15.81■□□□□ 0.12
PDPN-202ENST00000376057 NBPF8Q3BBV2 869 aa15.81■□□□□ 0.12
PDPN-202ENST00000376057 KIF1BO60333 1816 aa15.81■□□□□ 0.12
PDPN-202ENST00000376057 NPATQ14207 1427 aa15.81■□□□□ 0.12
PDPN-202ENST00000376057 TRPM1Q7Z4N2 1603 aa15.8■□□□□ 0.12
PDPN-202ENST00000376057 PRAG1Q86YV5 1406 aa15.79■□□□□ 0.12
PDPN-202ENST00000376057 IFT172Q9UG01 1749 aa15.79■□□□□ 0.12
PDPN-202ENST00000376057 POLR1AO95602 1720 aaPredicted RBP15.78■□□□□ 0.12
PDPN-202ENST00000376057 SIGLEC1Q9BZZ2 1709 aa15.78■□□□□ 0.12
PDPN-202ENST00000376057 KIAA1210Q9ULL0 1709 aa15.78■□□□□ 0.12
PDPN-202ENST00000376057 ADGRB3O60242 1522 aa15.77■□□□□ 0.12
PDPN-202ENST00000376057 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.11
PDPN-202ENST00000376057 GPRASP1Q5JY77 1395 aa15.77■□□□□ 0.11
PDPN-202ENST00000376057 MYOM2P54296 1465 aa15.76■□□□□ 0.11
PDPN-202ENST00000376057 EIF4G2P78344 907 aaKnown RBP eCLIP15.75■□□□□ 0.11
PDPN-202ENST00000376057 PREX1Q8TCU6 1659 aa15.75■□□□□ 0.11
PDPN-202ENST00000376057 MADDQ8WXG6 1647 aa15.75■□□□□ 0.11
PDPN-202ENST00000376057 GGT6Q6P531 493 aa15.74■□□□□ 0.11
PDPN-202ENST00000376057 SYNMO15061 1565 aa15.74■□□□□ 0.11
PDPN-202ENST00000376057 NRXN1Q9ULB1 1477 aa15.73■□□□□ 0.11
PDPN-202ENST00000376057 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
PDPN-202ENST00000376057 MROH2AA6NES4 1674 aa15.71■□□□□ 0.11
PDPN-202ENST00000376057 RPGRIP1LQ68CZ1 1315 aa15.7■□□□□ 0.1
PDPN-202ENST00000376057 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
PDPN-202ENST00000376057 SPATA31D1Q6ZQQ2 1576 aa15.7■□□□□ 0.1
PDPN-202ENST00000376057 PPLO60437 1756 aa15.7■□□□□ 0.1
PDPN-202ENST00000376057 CLTCQ00610 1675 aaKnown RBP15.7■□□□□ 0.1
PDPN-202ENST00000376057 ARID4BQ4LE39 1312 aaPredicted RBP15.7■□□□□ 0.1
PDPN-202ENST00000376057 UGGT1Q9NYU2 1555 aa15.69■□□□□ 0.1
PDPN-202ENST00000376057 SLC52A1Q9NWF4 448 aa15.68■□□□□ 0.1
PDPN-202ENST00000376057 ERVK-7P63135 1459 aa15.68■□□□□ 0.1
PDPN-202ENST00000376057 USP47Q96K76 1375 aa15.66■□□□□ 0.1
PDPN-202ENST00000376057 ZFYVE9O95405 1425 aa15.66■□□□□ 0.1
PDPN-202ENST00000376057 KDM5AP29375 1690 aaKnown RBP15.66■□□□□ 0.1
PDPN-202ENST00000376057 TMEM131LA2VDJ0 1609 aa15.65■□□□□ 0.1
PDPN-202ENST00000376057 IQGAP1P46940 1657 aa15.65■□□□□ 0.1
PDPN-202ENST00000376057 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.1
PDPN-202ENST00000376057 ROCK2O75116 1388 aaKnown RBP15.64■□□□□ 0.09
PDPN-202ENST00000376057 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
PDPN-202ENST00000376057 KDM2AQ9Y2K7 1162 aa15.63■□□□□ 0.09
PDPN-202ENST00000376057 NEXMIFQ5QGS0 1516 aa15.62■□□□□ 0.09
PDPN-202ENST00000376057 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
PDPN-202ENST00000376057 CCDC7Q96M83 1385 aa15.61■□□□□ 0.09
PDPN-202ENST00000376057 CFAP65Q6ZU64 1925 aaKnown RBP15.6■□□□□ 0.09
PDPN-202ENST00000376057 WASHC2AQ641Q2 1341 aa15.6■□□□□ 0.09
PDPN-202ENST00000376057 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
PDPN-202ENST00000376057 PIK3C2GO75747 1445 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms