RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 SMC4Q9NTJ3 1288 aa21.3■■□□□ 1
VARS-215ENST00000375663 KIF3BO15066 747 aa21.29■■□□□ 1
VARS-215ENST00000375663 DNTTIP2Q5QJE6 756 aaKnown RBP21.29■■□□□ 1
VARS-215ENST00000375663 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
VARS-215ENST00000375663 NAIPQ13075 1403 aa21.29■■□□□ 1
VARS-215ENST00000375663 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
VARS-215ENST00000375663 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
VARS-215ENST00000375663 E9PSI1 815 aa21.28■■□□□ 1
VARS-215ENST00000375663 GOLGA6L3A6NEY3 463 aa21.28■■□□□ 1
VARS-215ENST00000375663 EFCAB5A4FU69 1503 aa21.28■■□□□ 1
VARS-215ENST00000375663 GBP4Q96PP9 640 aa21.27■■□□□ 1
VARS-215ENST00000375663 STK26Q9P289 416 aa21.27■■□□□ 1
VARS-215ENST00000375663 COG6Q9Y2V7 657 aa21.27■■□□□ 1
VARS-215ENST00000375663 CGNL1Q0VF96 1302 aa21.27■■□□□ 1
VARS-215ENST00000375663 ANKRD50Q9ULJ7 1429 aa21.26■□□□□ 0.99
VARS-215ENST00000375663 BCL2L13Q9BXK5 485 aa21.26■□□□□ 0.99
VARS-215ENST00000375663 SPAG9O60271 1321 aaKnown RBP21.24■□□□□ 0.99
VARS-215ENST00000375663 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
VARS-215ENST00000375663 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
VARS-215ENST00000375663 SMG6Q86US8 1419 aaKnown RBP21.22■□□□□ 0.99
VARS-215ENST00000375663 MSNP26038 577 aaKnown RBP21.2■□□□□ 0.99
VARS-215ENST00000375663 NFKBIBQ15653 356 aa21.2■□□□□ 0.99
VARS-215ENST00000375663 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
VARS-215ENST00000375663 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
VARS-215ENST00000375663 ADAMTS8Q9UP79 889 aa21.2■□□□□ 0.98
VARS-215ENST00000375663 TRAK1Q9UPV9 953 aa21.19■□□□□ 0.98
VARS-215ENST00000375663 APBB1O00213 710 aa21.19■□□□□ 0.98
VARS-215ENST00000375663 PLCB2Q00722 1185 aa21.19■□□□□ 0.98
VARS-215ENST00000375663 MAP3K1Q13233 1512 aa21.18■□□□□ 0.98
VARS-215ENST00000375663 HDGFL2Q7Z4V5 671 aaPredicted RBP21.18■□□□□ 0.98
VARS-215ENST00000375663 EHBP1L1Q8N3D4 1523 aa21.17■□□□□ 0.98
VARS-215ENST00000375663 ZBTB7CA1YPR0 619 aa21.17■□□□□ 0.98
VARS-215ENST00000375663 CFAP44Q96MT7 982 aa21.17■□□□□ 0.98
VARS-215ENST00000375663 BACH2Q9BYV9 841 aa21.16■□□□□ 0.98
VARS-215ENST00000375663 UNC13AQ9UPW8 1703 aa21.15■□□□□ 0.98
VARS-215ENST00000375663 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.986e-7■■■■□ 26.7
VARS-215ENST00000375663 HAP1P54257 671 aaPredicted RBP21.14■□□□□ 0.97
VARS-215ENST00000375663 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
VARS-215ENST00000375663 PTMSP20962 102 aa21.14■□□□□ 0.97
VARS-215ENST00000375663 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
VARS-215ENST00000375663 NGEFQ8N5V2 710 aa21.13■□□□□ 0.97
VARS-215ENST00000375663 KIAA1107Q9UPP5 1409 aa21.13■□□□□ 0.97
VARS-215ENST00000375663 CALD1Q05682 793 aaKnown RBP21.13■□□□□ 0.97
VARS-215ENST00000375663 NBPF1Q3BBV0 1214 aa21.12■□□□□ 0.97
VARS-215ENST00000375663 PTPRGP23470 1445 aa21.12■□□□□ 0.97
VARS-215ENST00000375663 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
VARS-215ENST00000375663 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
VARS-215ENST00000375663 FOXD4L1Q9NU39 408 aa21.11■□□□□ 0.97
VARS-215ENST00000375663 MAPKBP1O60336 1514 aa21.11■□□□□ 0.97
VARS-215ENST00000375663 SOX12O15370 315 aa21.1■□□□□ 0.97
VARS-215ENST00000375663 A0A0G2JS52 829 aa21.1■□□□□ 0.97
VARS-215ENST00000375663 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
VARS-215ENST00000375663 TERF2IPQ9NYB0 399 aa21.09■□□□□ 0.97
VARS-215ENST00000375663 MCCP23508 829 aa21.08■□□□□ 0.97
VARS-215ENST00000375663 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.97
VARS-215ENST00000375663 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
VARS-215ENST00000375663 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
VARS-215ENST00000375663 RSPH6AQ9H0K4 717 aa21.07■□□□□ 0.96
VARS-215ENST00000375663 PANK1Q8TE04 598 aa21.06■□□□□ 0.96
VARS-215ENST00000375663 DDX11L8A8MPP1 907 aa21.06■□□□□ 0.96
VARS-215ENST00000375663 IL27Q8NEV9 243 aa21.05■□□□□ 0.96
VARS-215ENST00000375663 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
VARS-215ENST00000375663 DAPK1P53355 1430 aa21.05■□□□□ 0.96
VARS-215ENST00000375663 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
VARS-215ENST00000375663 SUPT6HQ7KZ85 1726 aaKnown RBP21.05■□□□□ 0.96
VARS-215ENST00000375663 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
VARS-215ENST00000375663 NESP48681 1621 aa21.03■□□□□ 0.96
VARS-215ENST00000375663 KCNJ4P48050 445 aa21.03■□□□□ 0.96
VARS-215ENST00000375663 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
VARS-215ENST00000375663 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.96
VARS-215ENST00000375663 DZIP1LQ8IYY4 767 aaKnown RBP21.02■□□□□ 0.95
VARS-215ENST00000375663 FRAT2O75474 233 aaPredicted RBP21.01■□□□□ 0.95
VARS-215ENST00000375663 BRPF3Q9ULD4 1205 aa21.01■□□□□ 0.95
VARS-215ENST00000375663 ANKRD45Q5TZF3 282 aa21■□□□□ 0.95
VARS-215ENST00000375663 RUNDC1Q96C34 613 aa21■□□□□ 0.95
VARS-215ENST00000375663 RTF1Q92541 710 aaKnown RBP21■□□□□ 0.95
VARS-215ENST00000375663 ELL2O00472 640 aaPredicted RBP21■□□□□ 0.95
VARS-215ENST00000375663 CHMP5Q9NZZ3 219 aa21■□□□□ 0.95
VARS-215ENST00000375663 PRG4Q92954 1404 aaPredicted RBP20.99■□□□□ 0.95
VARS-215ENST00000375663 ZRSR1Q15695 479 aaKnown RBP20.99■□□□□ 0.95
VARS-215ENST00000375663 DDX19BQ9UMR2 479 aa20.99■□□□□ 0.95
VARS-215ENST00000375663 STAC3Q96MF2 364 aa20.98■□□□□ 0.95
VARS-215ENST00000375663 ROCK1Q13464 1354 aa20.98■□□□□ 0.95
VARS-215ENST00000375663 MLECQ14165 292 aa20.97■□□□□ 0.95
VARS-215ENST00000375663 GRIN2BQ13224 1484 aa20.96■□□□□ 0.95
VARS-215ENST00000375663 GOLGA6L4A6NEF3 574 aa20.96■□□□□ 0.95
VARS-215ENST00000375663 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
VARS-215ENST00000375663 TROQ12816 1431 aaPredicted RBP20.96■□□□□ 0.95
VARS-215ENST00000375663 EVC2Q86UK5 1308 aa20.95■□□□□ 0.94
VARS-215ENST00000375663 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
VARS-215ENST00000375663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
VARS-215ENST00000375663 DDX49Q9Y6V7 483 aaKnown RBP20.95■□□□□ 0.94
VARS-215ENST00000375663 C9orf84Q5VXU9 1444 aa20.95■□□□□ 0.94
VARS-215ENST00000375663 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
VARS-215ENST00000375663 BCAR3O75815 825 aa20.95■□□□□ 0.94
VARS-215ENST00000375663 CDK13Q14004 1512 aaKnown RBP20.95■□□□□ 0.94
VARS-215ENST00000375663 HECW1Q76N89 1606 aa20.94■□□□□ 0.94
VARS-215ENST00000375663 C22orf23Q9BZE7 217 aa20.94■□□□□ 0.94
VARS-215ENST00000375663 AAMPQ13685 434 aa20.93■□□□□ 0.94
VARS-215ENST00000375663 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms