RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 FOXD4L4Q8WXT5 416 aaPredicted RBP13.17□□□□□ -0.3
TNXB-201ENST00000375244 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
TNXB-201ENST00000375244 HSPA5P11021 654 aaKnown RBP13.16□□□□□ -0.3
TNXB-201ENST00000375244 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
TNXB-201ENST00000375244 MLECQ14165 292 aa13.16□□□□□ -0.3
TNXB-201ENST00000375244 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
TNXB-201ENST00000375244 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.31
TNXB-201ENST00000375244 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
TNXB-201ENST00000375244 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
TNXB-201ENST00000375244 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
TNXB-201ENST00000375244 TEX35Q5T0J7 233 aa13.13□□□□□ -0.31
TNXB-201ENST00000375244 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
TNXB-201ENST00000375244 BECN2A8MW95 431 aa13.13□□□□□ -0.31
TNXB-201ENST00000375244 RRP12Q5JTH9 1297 aaKnown RBP13.12□□□□□ -0.31
TNXB-201ENST00000375244 ATP6V1DQ9Y5K8 247 aa13.12□□□□□ -0.31
TNXB-201ENST00000375244 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
TNXB-201ENST00000375244 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
TNXB-201ENST00000375244 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
TNXB-201ENST00000375244 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
TNXB-201ENST00000375244 ZNF771Q7L3S4 317 aaPredicted RBP13.1□□□□□ -0.31
TNXB-201ENST00000375244 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
TNXB-201ENST00000375244 IPO7O95373 1038 aaKnown RBP13.1□□□□□ -0.31
TNXB-201ENST00000375244 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
TNXB-201ENST00000375244 ZNF592Q92610 1267 aa13.09□□□□□ -0.31
TNXB-201ENST00000375244 SKOR2Q2VWA4 1001 aaPredicted RBP13.09□□□□□ -0.31
TNXB-201ENST00000375244 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
TNXB-201ENST00000375244 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
TNXB-201ENST00000375244 PKD2Q13563 968 aa13.08□□□□□ -0.31
TNXB-201ENST00000375244 ANKRD20A12PQ8NF67 263 aa13.08□□□□□ -0.32
TNXB-201ENST00000375244 FOXD1Q16676 465 aa13.08□□□□□ -0.32
TNXB-201ENST00000375244 GTF2E1P29083 439 aaPredicted RBP13.07□□□□□ -0.32
TNXB-201ENST00000375244 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
TNXB-201ENST00000375244 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
TNXB-201ENST00000375244 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
TNXB-201ENST00000375244 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
TNXB-201ENST00000375244 CLUAP1Q96AJ1 413 aa13.06□□□□□ -0.32
TNXB-201ENST00000375244 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
TNXB-201ENST00000375244 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
TNXB-201ENST00000375244 AK7Q96M32 723 aa13.06□□□□□ -0.32
TNXB-201ENST00000375244 GGT6Q6P531 493 aa13.06□□□□□ -0.32
TNXB-201ENST00000375244 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
TNXB-201ENST00000375244 PCMTD1Q96MG8 357 aaPredicted RBP13.05□□□□□ -0.32
TNXB-201ENST00000375244 DDX49Q9Y6V7 483 aaKnown RBP13.05□□□□□ -0.32
TNXB-201ENST00000375244 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
TNXB-201ENST00000375244 LRRFIP1Q32MZ4 808 aaKnown RBP13.04□□□□□ -0.32
TNXB-201ENST00000375244 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
TNXB-201ENST00000375244 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
TNXB-201ENST00000375244 GON4LQ3T8J9 2241 aa13.04□□□□□ -0.32
TNXB-201ENST00000375244 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
TNXB-201ENST00000375244 NACADO15069 1562 aa13.03□□□□□ -0.32
TNXB-201ENST00000375244 DIAPH3Q9NSV4 1193 aa13.03□□□□□ -0.32
TNXB-201ENST00000375244 RUFY1Q96T51 708 aa13.03□□□□□ -0.32
TNXB-201ENST00000375244 HOMER1Q86YM7 354 aa13.03□□□□□ -0.32
TNXB-201ENST00000375244 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
TNXB-201ENST00000375244 TRIM34Q9BYJ4 488 aa13.02□□□□□ -0.32
TNXB-201ENST00000375244 NOM1Q5C9Z4 860 aaKnown RBP13.02□□□□□ -0.32
TNXB-201ENST00000375244 KRI1Q8N9T8 703 aaKnown RBP13.02□□□□□ -0.32
TNXB-201ENST00000375244 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
TNXB-201ENST00000375244 AMPHP49418 695 aa13.02□□□□□ -0.33
TNXB-201ENST00000375244 TRIM29Q14134 588 aa13.02□□□□□ -0.33
TNXB-201ENST00000375244 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
TNXB-201ENST00000375244 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
TNXB-201ENST00000375244 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
TNXB-201ENST00000375244 CCDC47Q96A33 483 aaKnown RBP13.01□□□□□ -0.33
TNXB-201ENST00000375244 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
TNXB-201ENST00000375244 ANKRD30AQ9BXX3 1397 aa13.01□□□□□ -0.33
TNXB-201ENST00000375244 RUFY2Q8WXA3 655 aa13.01□□□□□ -0.33
TNXB-201ENST00000375244 ACBD3Q9H3P7 528 aa13.01□□□□□ -0.33
TNXB-201ENST00000375244 CDR1P51861 262 aa13.01□□□□□ -0.33
TNXB-201ENST00000375244 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
TNXB-201ENST00000375244 ANKRD45Q5TZF3 282 aa13□□□□□ -0.33
TNXB-201ENST00000375244 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
TNXB-201ENST00000375244 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
TNXB-201ENST00000375244 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
TNXB-201ENST00000375244 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
TNXB-201ENST00000375244 NUP155O75694 1391 aa13□□□□□ -0.33
TNXB-201ENST00000375244 NAP1L1P55209 391 aaKnown RBP13□□□□□ -0.33
TNXB-201ENST00000375244 FAM161AQ3B820 660 aa13□□□□□ -0.33
TNXB-201ENST00000375244 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
TNXB-201ENST00000375244 CPLX1O14810 134 aa12.99□□□□□ -0.33
TNXB-201ENST00000375244 CUX2O14529 1486 aa12.99□□□□□ -0.33
TNXB-201ENST00000375244 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
TNXB-201ENST00000375244 REC8O95072 547 aa12.99□□□□□ -0.33
TNXB-201ENST00000375244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNXB-201ENST00000375244 ZKSCAN1P17029 563 aaPredicted RBP12.98□□□□□ -0.33
TNXB-201ENST00000375244 GSE1Q14687 1217 aa12.98□□□□□ -0.33
TNXB-201ENST00000375244 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
TNXB-201ENST00000375244 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
TNXB-201ENST00000375244 ARGLU1Q9NWB6 273 aaPredicted RBP12.98□□□□□ -0.33
TNXB-201ENST00000375244 FAM13BQ9NYF5 915 aa12.98□□□□□ -0.33
TNXB-201ENST00000375244 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
TNXB-201ENST00000375244 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
TNXB-201ENST00000375244 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
TNXB-201ENST00000375244 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
TNXB-201ENST00000375244 EPS15P42566 896 aa12.97□□□□□ -0.33
TNXB-201ENST00000375244 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
TNXB-201ENST00000375244 CGNL1Q0VF96 1302 aa12.96□□□□□ -0.33
TNXB-201ENST00000375244 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.33
TNXB-201ENST00000375244 RAD21O60216 631 aa12.96□□□□□ -0.33
TNXB-201ENST00000375244 C1orf141Q5JVX7 400 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms