RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
HLA-DQA1-202ENST00000374949 NEURL4Q96JN8 1562 aa17.08■□□□□ 0.32
HLA-DQA1-202ENST00000374949 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
HLA-DQA1-202ENST00000374949 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
HLA-DQA1-202ENST00000374949 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
HLA-DQA1-202ENST00000374949 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
HLA-DQA1-202ENST00000374949 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
HLA-DQA1-202ENST00000374949 PZPP20742 1482 aa17.05■□□□□ 0.32
HLA-DQA1-202ENST00000374949 TNRQ92752 1358 aa17.04■□□□□ 0.32
HLA-DQA1-202ENST00000374949 KIF3BO15066 747 aa17.02■□□□□ 0.32
HLA-DQA1-202ENST00000374949 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQA1-202ENST00000374949 ARHGEF5Q12774 1597 aa17.02■□□□□ 0.31
HLA-DQA1-202ENST00000374949 CPS1P31327 1500 aa16.99■□□□□ 0.31
HLA-DQA1-202ENST00000374949 RNF17Q9BXT8 1623 aaKnown RBP16.98■□□□□ 0.31
HLA-DQA1-202ENST00000374949 SHANK2Q9UPX8 1470 aa16.98■□□□□ 0.31
HLA-DQA1-202ENST00000374949 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
HLA-DQA1-202ENST00000374949 UGGT1Q9NYU2 1555 aa16.97■□□□□ 0.31
HLA-DQA1-202ENST00000374949 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.31
HLA-DQA1-202ENST00000374949 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
HLA-DQA1-202ENST00000374949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
HLA-DQA1-202ENST00000374949 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
HLA-DQA1-202ENST00000374949 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
HLA-DQA1-202ENST00000374949 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
HLA-DQA1-202ENST00000374949 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
HLA-DQA1-202ENST00000374949 DEPDC5O75140 1603 aa16.95■□□□□ 0.3
HLA-DQA1-202ENST00000374949 ABCC3O15438 1527 aa16.95■□□□□ 0.3
HLA-DQA1-202ENST00000374949 IQGAP1P46940 1657 aa16.94■□□□□ 0.3
HLA-DQA1-202ENST00000374949 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
HLA-DQA1-202ENST00000374949 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
HLA-DQA1-202ENST00000374949 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
HLA-DQA1-202ENST00000374949 EIF2AK4Q9P2K8 1649 aaKnown RBP16.93■□□□□ 0.3
HLA-DQA1-202ENST00000374949 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
HLA-DQA1-202ENST00000374949 NPHP4O75161 1426 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQA1-202ENST00000374949 CEP152O94986 1710 aa16.93■□□□□ 0.3
HLA-DQA1-202ENST00000374949 HSPA1LP34931 641 aa16.92■□□□□ 0.3
HLA-DQA1-202ENST00000374949 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
HLA-DQA1-202ENST00000374949 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
HLA-DQA1-202ENST00000374949 RSPH4AQ5TD94 716 aa16.91■□□□□ 0.3
HLA-DQA1-202ENST00000374949 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
HLA-DQA1-202ENST00000374949 MED14O60244 1454 aa16.91■□□□□ 0.3
HLA-DQA1-202ENST00000374949 APLP2Q06481 763 aa16.9■□□□□ 0.3
HLA-DQA1-202ENST00000374949 ANKLE2Q86XL3 938 aa16.9■□□□□ 0.3
HLA-DQA1-202ENST00000374949 ERVK-7P63135 1459 aa16.89■□□□□ 0.29
HLA-DQA1-202ENST00000374949 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
HLA-DQA1-202ENST00000374949 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
HLA-DQA1-202ENST00000374949 THEMISQ8N1K5 641 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQA1-202ENST00000374949 SYNMO15061 1565 aa16.88■□□□□ 0.29
HLA-DQA1-202ENST00000374949 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
HLA-DQA1-202ENST00000374949 TOM1O60784 492 aa16.87■□□□□ 0.29
HLA-DQA1-202ENST00000374949 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
HLA-DQA1-202ENST00000374949 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
HLA-DQA1-202ENST00000374949 MYOM3Q5VTT5 1437 aa16.84■□□□□ 0.29
HLA-DQA1-202ENST00000374949 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.28
HLA-DQA1-202ENST00000374949 DUOX2Q9NRD8 1548 aa16.83■□□□□ 0.28
HLA-DQA1-202ENST00000374949 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQA1-202ENST00000374949 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
HLA-DQA1-202ENST00000374949 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
HLA-DQA1-202ENST00000374949 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQA1-202ENST00000374949 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQA1-202ENST00000374949 SCAF11Q99590 1463 aaKnown RBP16.8■□□□□ 0.28
HLA-DQA1-202ENST00000374949 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
HLA-DQA1-202ENST00000374949 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
HLA-DQA1-202ENST00000374949 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
HLA-DQA1-202ENST00000374949 KIF15Q9NS87 1388 aa16.77■□□□□ 0.27
HLA-DQA1-202ENST00000374949 SLIT1O75093 1534 aa16.76■□□□□ 0.27
HLA-DQA1-202ENST00000374949 ARHGAP23Q9P227 1491 aa16.76■□□□□ 0.27
HLA-DQA1-202ENST00000374949 ERBINQ96RT1 1412 aa16.76■□□□□ 0.27
HLA-DQA1-202ENST00000374949 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQA1-202ENST00000374949 ABCC5O15440 1437 aa16.74■□□□□ 0.27
HLA-DQA1-202ENST00000374949 TRIM26Q12899 539 aaPredicted RBP16.74■□□□□ 0.27
HLA-DQA1-202ENST00000374949 ARHGAP31Q2M1Z3 1444 aa16.73■□□□□ 0.27
HLA-DQA1-202ENST00000374949 LTKP29376 864 aa16.72■□□□□ 0.27
HLA-DQA1-202ENST00000374949 DAPK1P53355 1430 aa16.71■□□□□ 0.27
HLA-DQA1-202ENST00000374949 RRP7BPQ9NSQ0 103 aa16.7■□□□□ 0.26
HLA-DQA1-202ENST00000374949 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
HLA-DQA1-202ENST00000374949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.69■□□□□ 0.26
HLA-DQA1-202ENST00000374949 EFCAB6Q5THR3 1501 aa16.69■□□□□ 0.26
HLA-DQA1-202ENST00000374949 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
HLA-DQA1-202ENST00000374949 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
HLA-DQA1-202ENST00000374949 FGD6Q6ZV73 1430 aa16.67■□□□□ 0.26
HLA-DQA1-202ENST00000374949 LMTK2Q8IWU2 1503 aa16.66■□□□□ 0.26
HLA-DQA1-202ENST00000374949 KANK1Q14678 1352 aa16.65■□□□□ 0.26
HLA-DQA1-202ENST00000374949 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
HLA-DQA1-202ENST00000374949 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
HLA-DQA1-202ENST00000374949 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
HLA-DQA1-202ENST00000374949 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
HLA-DQA1-202ENST00000374949 TMEM94Q12767 1356 aa16.63■□□□□ 0.25
HLA-DQA1-202ENST00000374949 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
HLA-DQA1-202ENST00000374949 TET3O43151 1660 aa16.62■□□□□ 0.25
HLA-DQA1-202ENST00000374949 ANKRD30AQ9BXX3 1397 aa16.62■□□□□ 0.25
HLA-DQA1-202ENST00000374949 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
HLA-DQA1-202ENST00000374949 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
HLA-DQA1-202ENST00000374949 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
HLA-DQA1-202ENST00000374949 NOS1P29475 1434 aa16.6■□□□□ 0.25
HLA-DQA1-202ENST00000374949 IDI1Q13907 227 aa16.59■□□□□ 0.25
HLA-DQA1-202ENST00000374949 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
HLA-DQA1-202ENST00000374949 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQA1-202ENST00000374949 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
HLA-DQA1-202ENST00000374949 NKTRP30414 1462 aaKnown RBP16.58■□□□□ 0.24
HLA-DQA1-202ENST00000374949 GCC2Q8IWJ2 1684 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms