RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 LMOD2Q6P5Q4 547 aa10.81□□□□□ -0.68
ABCA1-202ENST00000374736 NPHP1O15259 732 aa10.8□□□□□ -0.68
ABCA1-202ENST00000374736 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
ABCA1-202ENST00000374736 DCTN1Q14203 1278 aa10.8□□□□□ -0.68
ABCA1-202ENST00000374736 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
ABCA1-202ENST00000374736 IL27Q8NEV9 243 aa10.79□□□□□ -0.68
ABCA1-202ENST00000374736 SLC26A8Q96RN1 970 aa10.79□□□□□ -0.68
ABCA1-202ENST00000374736 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
ABCA1-202ENST00000374736 HSP90B2PQ58FF3 399 aa10.78□□□□□ -0.68
ABCA1-202ENST00000374736 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
ABCA1-202ENST00000374736 RNF168Q8IYW5 571 aaPredicted RBP10.78□□□□□ -0.68
ABCA1-202ENST00000374736 CAGE1Q8TC20 777 aa10.78□□□□□ -0.68
ABCA1-202ENST00000374736 KIF1CO43896 1103 aaKnown RBP10.78□□□□□ -0.68
ABCA1-202ENST00000374736 TTLL5Q6EMB2 1281 aa10.78□□□□□ -0.68
ABCA1-202ENST00000374736 PUS7Q96PZ0 661 aaKnown RBP10.78□□□□□ -0.68
ABCA1-202ENST00000374736 CCER2I3L3R5 266 aa10.77□□□□□ -0.69
ABCA1-202ENST00000374736 CCDC39Q9UFE4 941 aa10.77□□□□□ -0.69
ABCA1-202ENST00000374736 GORABQ5T7V8 394 aa10.77□□□□□ -0.69
ABCA1-202ENST00000374736 GOLGA6L10A0A0M3HER8 536 aa10.76□□□□□ -0.69
ABCA1-202ENST00000374736 CCDC97Q96F63 343 aaPredicted RBP10.76□□□□□ -0.69
ABCA1-202ENST00000374736 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
ABCA1-202ENST00000374736 GOLGA6L7A0A1B0GV03 622 aa10.76□□□□□ -0.69
ABCA1-202ENST00000374736 CCDC173Q0VFZ6 552 aa10.76□□□□□ -0.69
ABCA1-202ENST00000374736 GOLGA6L9A6NEM1 432 aa10.75□□□□□ -0.69
ABCA1-202ENST00000374736 MAPK8IP2Q13387 824 aaPredicted RBP10.75□□□□□ -0.69
ABCA1-202ENST00000374736 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
ABCA1-202ENST00000374736 KIAA1211Q6ZU35 1233 aa10.75□□□□□ -0.69
ABCA1-202ENST00000374736 MYO6Q9UM54 1294 aa10.75□□□□□ -0.69
ABCA1-202ENST00000374736 HSP90AB4PQ58FF6 505 aa10.75□□□□□ -0.69
ABCA1-202ENST00000374736 STK31Q9BXU1 1019 aa10.75□□□□□ -0.69
ABCA1-202ENST00000374736 CCDC34Q96HJ3 373 aa10.75□□□□□ -0.69
ABCA1-202ENST00000374736 RRP12Q5JTH9 1297 aaKnown RBP10.75□□□□□ -0.69
ABCA1-202ENST00000374736 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
ABCA1-202ENST00000374736 NINLQ9Y2I6 1382 aa10.74□□□□□ -0.69
ABCA1-202ENST00000374736 MS4A1P11836 297 aa10.74□□□□□ -0.69
ABCA1-202ENST00000374736 FYB1O15117 783 aa10.74□□□□□ -0.69
ABCA1-202ENST00000374736 NOL8Q76FK4 1167 aaKnown RBP10.74□□□□□ -0.69
ABCA1-202ENST00000374736 HSP90AB2PQ58FF8 381 aa10.74□□□□□ -0.69
ABCA1-202ENST00000374736 POLR3GO15318 223 aaPredicted RBP10.74□□□□□ -0.69
ABCA1-202ENST00000374736 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
ABCA1-202ENST00000374736 LRCH2Q5VUJ6 765 aa10.74□□□□□ -0.69
ABCA1-202ENST00000374736 CFAP53Q96M91 514 aa10.73□□□□□ -0.69
ABCA1-202ENST00000374736 NUTM1Q86Y26 1132 aa10.73□□□□□ -0.69
ABCA1-202ENST00000374736 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
ABCA1-202ENST00000374736 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
ABCA1-202ENST00000374736 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
ABCA1-202ENST00000374736 CT47A1Q5JQC4 288 aaPredicted RBP10.73□□□□□ -0.69
ABCA1-202ENST00000374736 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
ABCA1-202ENST00000374736 MCM5P33992 734 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 TERF1P54274 439 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 UTP14CQ5TAP6 766 aaKnown RBP10.72□□□□□ -0.69
ABCA1-202ENST00000374736 KIF16BQ96L93 1317 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 WDR66Q8TBY9 1149 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 NEXNQ0ZGT2 675 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
ABCA1-202ENST00000374736 NOC3LQ8WTT2 800 aaKnown RBP10.72□□□□□ -0.69
ABCA1-202ENST00000374736 TCHPQ9BT92 498 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 CCDC70Q6NSX1 233 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 DRC7Q8IY82 874 aa10.72□□□□□ -0.69
ABCA1-202ENST00000374736 MFAP1P55081 439 aaKnown RBP10.71□□□□□ -0.69
ABCA1-202ENST00000374736 PAF1Q8N7H5 531 aa10.71□□□□□ -0.69
ABCA1-202ENST00000374736 ZFP91Q96JP5 570 aaPredicted RBP10.71□□□□□ -0.69
ABCA1-202ENST00000374736 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.69
ABCA1-202ENST00000374736 CLCN1P35523 988 aa10.71□□□□□ -0.69
ABCA1-202ENST00000374736 ESPNB1AK53 854 aa10.71□□□□□ -0.7
ABCA1-202ENST00000374736 ERCC4Q92889 916 aaPredicted RBP10.71□□□□□ -0.7
ABCA1-202ENST00000374736 RABEP1Q15276 862 aa10.71□□□□□ -0.7
ABCA1-202ENST00000374736 PRDM10Q9NQV6 1147 aa10.7□□□□□ -0.7
ABCA1-202ENST00000374736 NUCKS1Q9H1E3 243 aaKnown RBP10.7□□□□□ -0.7
ABCA1-202ENST00000374736 CCDC94Q9BW85 323 aaPredicted RBP10.7□□□□□ -0.7
ABCA1-202ENST00000374736 ZRANB2O95218 330 aaKnown RBP eCLIP10.7□□□□□ -0.7
ABCA1-202ENST00000374736 FMNL3Q8IVF7 1028 aa10.7□□□□□ -0.7
ABCA1-202ENST00000374736 TACO1Q9BSH4 297 aaKnown RBP10.7□□□□□ -0.7
ABCA1-202ENST00000374736 IVLP07476 585 aa10.69□□□□□ -0.7
ABCA1-202ENST00000374736 ANKRD20A12PQ8NF67 263 aa10.69□□□□□ -0.7
ABCA1-202ENST00000374736 RBM25P49756 843 aaKnown RBP10.69□□□□□ -0.7
ABCA1-202ENST00000374736 BRPF3Q9ULD4 1205 aa10.69□□□□□ -0.7
ABCA1-202ENST00000374736 KIAA0754O94854 1291 aa10.69□□□□□ -0.7
ABCA1-202ENST00000374736 TRDNQ13061 729 aa10.69□□□□□ -0.7
ABCA1-202ENST00000374736 EIF3JO75822 258 aaKnown RBP10.68□□□□□ -0.7
ABCA1-202ENST00000374736 TTC36A6NLP5 189 aa10.68□□□□□ -0.7
ABCA1-202ENST00000374736 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
ABCA1-202ENST00000374736 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
ABCA1-202ENST00000374736 FAM9BQ8IZU0 186 aa10.68□□□□□ -0.7
ABCA1-202ENST00000374736 E9PSI1 815 aa10.68□□□□□ -0.7
ABCA1-202ENST00000374736 NF2P35240 595 aa10.68□□□□□ -0.7
ABCA1-202ENST00000374736 RMDN2Q96LZ7 410 aa10.68□□□□□ -0.7
ABCA1-202ENST00000374736 BRMS1Q9HCU9 246 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 ZHX1Q9UKY1 873 aaPredicted RBP10.67□□□□□ -0.7
ABCA1-202ENST00000374736 RASSF8Q8NHQ8 419 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 IPO7O95373 1038 aaKnown RBP10.67□□□□□ -0.7
ABCA1-202ENST00000374736 ZMAT2Q96NC0 199 aaKnown RBP10.67□□□□□ -0.7
ABCA1-202ENST00000374736 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
ABCA1-202ENST00000374736 LUZP1Q86V48 1076 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 KCNJ4P48050 445 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 TSPY4P0CV99 314 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 TSPY10P0CW01 314 aa10.67□□□□□ -0.7
ABCA1-202ENST00000374736 RGS3P49796 1198 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms