RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ST20-MTHFSA0A0A6YYL1 179 aa25.22■■□□□ 1.63
RXRB-202ENST00000374685 PRKRIP1Q9H875 184 aaPredicted RBP25.22■■□□□ 1.63
RXRB-202ENST00000374685 MRS2Q9HD23 443 aa25.21■■□□□ 1.63
RXRB-202ENST00000374685 NPM1P06748 294 aaKnown RBP eCLIP25.2■■□□□ 1.62
RXRB-202ENST00000374685 SENP3-EIF4A1A0A087X0R7 540 aa25.2■■□□□ 1.62
RXRB-202ENST00000374685 KDM5DQ9BY66 1539 aa25.19■■□□□ 1.62
RXRB-202ENST00000374685 ROCK2O75116 1388 aaKnown RBP25.19■■□□□ 1.62
RXRB-202ENST00000374685 FKBP8Q14318 412 aa25.18■■□□□ 1.62
RXRB-202ENST00000374685 NBPF1Q3BBV0 1214 aa25.18■■□□□ 1.62
RXRB-202ENST00000374685 WDR7Q9Y4E6 1490 aa25.17■■□□□ 1.62
RXRB-202ENST00000374685 TSHZ2Q9NRE2 1034 aa25.15■■□□□ 1.62
RXRB-202ENST00000374685 ABCC1P33527 1531 aa25.15■■□□□ 1.62
RXRB-202ENST00000374685 KIF3BO15066 747 aa25.14■■□□□ 1.61
RXRB-202ENST00000374685 ASXL2Q76L83 1435 aa25.13■■□□□ 1.61
RXRB-202ENST00000374685 FANCAO15360 1455 aa25.13■■□□□ 1.61
RXRB-202ENST00000374685 PLA2R1Q13018 1463 aa25.13■■□□□ 1.61
RXRB-202ENST00000374685 SCAPERQ9BY12 1400 aa25.13■■□□□ 1.61
RXRB-202ENST00000374685 DUOX2Q9NRD8 1548 aa25.12■■□□□ 1.61
RXRB-202ENST00000374685 MAST1Q9Y2H9 1570 aa25.11■■□□□ 1.61
RXRB-202ENST00000374685 BCORL1Q5H9F3 1711 aa25.1■■□□□ 1.61
RXRB-202ENST00000374685 RALGAPBQ86X10 1494 aa25.09■■□□□ 1.61
RXRB-202ENST00000374685 PLXNC1O60486 1568 aa25.07■■□□□ 1.6
RXRB-202ENST00000374685 UHRF1BP1Q6BDS2 1440 aa25.07■■□□□ 1.6
RXRB-202ENST00000374685 NEFLP07196 543 aa25.06■■□□□ 1.6
RXRB-202ENST00000374685 ERBINQ96RT1 1412 aa25.06■■□□□ 1.6
RXRB-202ENST00000374685 ADGRL1O94910 1474 aa25.05■■□□□ 1.6
RXRB-202ENST00000374685 UNC13BO14795 1591 aa25.05■■□□□ 1.6
RXRB-202ENST00000374685 KDM5CP41229 1560 aa25.05■■□□□ 1.6
RXRB-202ENST00000374685 IRX6P78412 446 aaPredicted RBP25.04■■□□□ 1.6
RXRB-202ENST00000374685 A2MP01023 1474 aa25.02■■□□□ 1.6
RXRB-202ENST00000374685 PRAG1Q86YV5 1406 aa25.01■■□□□ 1.59
RXRB-202ENST00000374685 IQGAP3Q86VI3 1631 aa24.99■■□□□ 1.59
RXRB-202ENST00000374685 ZFYVE16Q7Z3T8 1539 aa24.98■■□□□ 1.59
RXRB-202ENST00000374685 DHX29Q7Z478 1369 aaKnown RBP24.97■■□□□ 1.59
RXRB-202ENST00000374685 GGT6Q6P531 493 aa24.95■■□□□ 1.58
RXRB-202ENST00000374685 CYB5RLQ6IPT4 315 aa24.94■■□□□ 1.58
RXRB-202ENST00000374685 ATP7AQ04656 1500 aa24.94■■□□□ 1.58
RXRB-202ENST00000374685 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
RXRB-202ENST00000374685 KANK1Q14678 1352 aa24.93■■□□□ 1.58
RXRB-202ENST00000374685 RTEL1-TNFRSF6BF6WH68 1400 aa24.92■■□□□ 1.58
RXRB-202ENST00000374685 RAPGEF3O95398 923 aa24.91■■□□□ 1.58
RXRB-202ENST00000374685 TMC1Q8TDI8 760 aa24.91■■□□□ 1.58
RXRB-202ENST00000374685 ABCA9Q8IUA7 1624 aa24.91■■□□□ 1.58
RXRB-202ENST00000374685 CD109Q6YHK3 1445 aa24.9■■□□□ 1.58
RXRB-202ENST00000374685 POLR1AO95602 1720 aaPredicted RBP24.9■■□□□ 1.58
RXRB-202ENST00000374685 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.58
RXRB-202ENST00000374685 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
RXRB-202ENST00000374685 PRKCSHP14314 528 aaPredicted RBP24.86■■□□□ 1.57
RXRB-202ENST00000374685 ARAP3Q8WWN8 1544 aa24.86■■□□□ 1.57
RXRB-202ENST00000374685 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
RXRB-202ENST00000374685 CC2D1BQ5T0F9 858 aaKnown RBP24.85■■□□□ 1.57
RXRB-202ENST00000374685 E9PCH4 1651 aa24.85■■□□□ 1.57
RXRB-202ENST00000374685 TRPM1Q7Z4N2 1603 aa24.85■■□□□ 1.57
RXRB-202ENST00000374685 ATP10AO60312 1499 aa24.85■■□□□ 1.57
RXRB-202ENST00000374685 DISP3Q9P2K9 1392 aa24.85■■□□□ 1.57
RXRB-202ENST00000374685 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
RXRB-202ENST00000374685 TESK2Q96S53 571 aa24.82■■□□□ 1.56
RXRB-202ENST00000374685 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
RXRB-202ENST00000374685 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
RXRB-202ENST00000374685 TMF1P82094 1093 aa24.79■■□□□ 1.56
RXRB-202ENST00000374685 PANK3Q9H999 370 aa24.79■■□□□ 1.56
RXRB-202ENST00000374685 CFAP65Q6ZU64 1925 aaKnown RBP24.78■■□□□ 1.56
RXRB-202ENST00000374685 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
RXRB-202ENST00000374685 CFAP70Q5T0N1 1121 aa24.76■■□□□ 1.55
RXRB-202ENST00000374685 GPRASP1Q5JY77 1395 aa24.75■■□□□ 1.55
RXRB-202ENST00000374685 NUTM2DQ5VT03 806 aaPredicted RBP24.75■■□□□ 1.55
RXRB-202ENST00000374685 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
RXRB-202ENST00000374685 ZBED9Q6R2W3 1325 aa24.74■■□□□ 1.55
RXRB-202ENST00000374685 WASHC2CQ9Y4E1 1318 aa24.73■■□□□ 1.55
RXRB-202ENST00000374685 ADGRF5Q8IZF2 1346 aa24.72■■□□□ 1.55
RXRB-202ENST00000374685 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
RXRB-202ENST00000374685 TRPM2O94759 1503 aa24.72■■□□□ 1.55
RXRB-202ENST00000374685 PNISRQ8TF01 805 aaKnown RBP24.72■■□□□ 1.55
RXRB-202ENST00000374685 SPHKAPQ2M3C7 1700 aa24.71■■□□□ 1.55
RXRB-202ENST00000374685 MYBBP1AQ9BQG0 1328 aaKnown RBP24.71■■□□□ 1.55
RXRB-202ENST00000374685 KTN1Q86UP2 1357 aaKnown RBP24.7■■□□□ 1.54
RXRB-202ENST00000374685 PTPRTO14522 1441 aa24.7■■□□□ 1.54
RXRB-202ENST00000374685 POGZQ7Z3K3 1410 aa24.69■■□□□ 1.54
RXRB-202ENST00000374685 PRDM15P57071 1507 aaPredicted RBP24.69■■□□□ 1.54
RXRB-202ENST00000374685 TET3O43151 1660 aa24.68■■□□□ 1.54
RXRB-202ENST00000374685 RALBP1Q15311 655 aa24.68■■□□□ 1.54
RXRB-202ENST00000374685 DEPDC5O75140 1603 aa24.68■■□□□ 1.54
RXRB-202ENST00000374685 EIF2AK4Q9P2K8 1649 aaKnown RBP24.67■■□□□ 1.54
RXRB-202ENST00000374685 COL17A1Q9UMD9 1497 aaPredicted RBP24.67■■□□□ 1.54
RXRB-202ENST00000374685 PER1O15534 1290 aaPredicted RBP24.67■■□□□ 1.54
RXRB-202ENST00000374685 MROH1Q8NDA8 1641 aa24.65■■□□□ 1.54
RXRB-202ENST00000374685 FAM69CQ0P6D2 419 aa24.63■■□□□ 1.53
RXRB-202ENST00000374685 MADDQ8WXG6 1647 aa24.62■■□□□ 1.53
RXRB-202ENST00000374685 NLRP13Q86W25 1043 aa24.61■■□□□ 1.53
RXRB-202ENST00000374685 CEP152O94986 1710 aa24.61■■□□□ 1.53
RXRB-202ENST00000374685 VWDEQ8N2E2 1590 aa24.6■■□□□ 1.53
RXRB-202ENST00000374685 TMEM132EQ6IEE7 984 aa24.6■■□□□ 1.53
RXRB-202ENST00000374685 KNSTRNQ9Y448 316 aa24.59■■□□□ 1.53
RXRB-202ENST00000374685 TRAK1Q9UPV9 953 aa24.59■■□□□ 1.53
RXRB-202ENST00000374685 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
RXRB-202ENST00000374685 EFCAB6Q5THR3 1501 aa24.58■■□□□ 1.53
RXRB-202ENST00000374685 NPATQ14207 1427 aa24.58■■□□□ 1.52
RXRB-202ENST00000374685 BRD4O60885 1362 aaPredicted RBP24.57■■□□□ 1.52
RXRB-202ENST00000374685 NOS1P29475 1434 aa24.56■■□□□ 1.52
RXRB-202ENST00000374685 SCAF11Q99590 1463 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms