RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 DCAF11Q8TEB1 546 aa8.04□□□□□ -1.12
PTPN3-202ENST00000374541 PTMSP20962 102 aa8.04□□□□□ -1.12
PTPN3-202ENST00000374541 KNSTRNQ9Y448 316 aa8.03□□□□□ -1.12
PTPN3-202ENST00000374541 AFAP1Q8N556 730 aa8.03□□□□□ -1.12
PTPN3-202ENST00000374541 SLC26A8Q96RN1 970 aa8.03□□□□□ -1.12
PTPN3-202ENST00000374541 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
PTPN3-202ENST00000374541 CARD11Q9BXL7 1154 aa8.02□□□□□ -1.13
PTPN3-202ENST00000374541 PRDM11Q9NQV5 511 aa8.02□□□□□ -1.13
PTPN3-202ENST00000374541 NLRP2Q9NX02 1062 aa8.02□□□□□ -1.13
PTPN3-202ENST00000374541 KRI1Q8N9T8 703 aaKnown RBP8.02□□□□□ -1.13
PTPN3-202ENST00000374541 ARHGAP5Q13017 1502 aa8.01□□□□□ -1.13
PTPN3-202ENST00000374541 POLD1P28340 1107 aa8.01□□□□□ -1.13
PTPN3-202ENST00000374541 NUP155O75694 1391 aa8.01□□□□□ -1.13
PTPN3-202ENST00000374541 C1orf141Q5JVX7 400 aa8.01□□□□□ -1.13
PTPN3-202ENST00000374541 FRAT2O75474 233 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-202ENST00000374541 TOM1L2Q6ZVM7 507 aa8.01□□□□□ -1.13
PTPN3-202ENST00000374541 NOP58Q9Y2X3 529 aaKnown RBP8.01□□□□□ -1.13
PTPN3-202ENST00000374541 SALL2Q9Y467 1007 aaPredicted RBP8.01□□□□□ -1.13
PTPN3-202ENST00000374541 MSH6P52701 1360 aa8.01□□□□□ -1.13
PTPN3-202ENST00000374541 PPP4R2Q9NY27 417 aa8□□□□□ -1.13
PTPN3-202ENST00000374541 GRM1Q13255 1194 aa8□□□□□ -1.13
PTPN3-202ENST00000374541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8□□□□□ -1.138e-7■■■□□ 18.1
PTPN3-202ENST00000374541 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
PTPN3-202ENST00000374541 NCBP3Q53F19 620 aaKnown RBP8□□□□□ -1.13
PTPN3-202ENST00000374541 FHOD3Q2V2M9 1422 aa7.99□□□□□ -1.13
PTPN3-202ENST00000374541 MSNP26038 577 aaKnown RBP7.99□□□□□ -1.13
PTPN3-202ENST00000374541 TAF7LQ5H9L4 462 aa7.99□□□□□ -1.13
PTPN3-202ENST00000374541 BEGAINQ9BUH8 593 aa7.99□□□□□ -1.13
PTPN3-202ENST00000374541 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
PTPN3-202ENST00000374541 TERF2IPQ9NYB0 399 aa7.99□□□□□ -1.13
PTPN3-202ENST00000374541 PKD2Q13563 968 aa7.98□□□□□ -1.13
PTPN3-202ENST00000374541 PNNQ9H307 717 aaKnown RBP7.98□□□□□ -1.13
PTPN3-202ENST00000374541 TRAK1Q9UPV9 953 aa7.98□□□□□ -1.13
PTPN3-202ENST00000374541 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
PTPN3-202ENST00000374541 CEP162Q5TB80 1403 aa7.98□□□□□ -1.13
PTPN3-202ENST00000374541 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
PTPN3-202ENST00000374541 BAG6P46379 1132 aa7.98□□□□□ -1.13
PTPN3-202ENST00000374541 CCAR1Q8IX12 1150 aaKnown RBP7.98□□□□□ -1.13
PTPN3-202ENST00000374541 SCAPERQ9BY12 1400 aa7.97□□□□□ -1.13
PTPN3-202ENST00000374541 WDHD1O75717 1129 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-202ENST00000374541 TTC5Q8N0Z6 440 aa7.97□□□□□ -1.13
PTPN3-202ENST00000374541 GPR162Q16538 588 aa7.97□□□□□ -1.13
PTPN3-202ENST00000374541 PLB1Q6P1J6 1458 aa7.97□□□□□ -1.13
PTPN3-202ENST00000374541 XPCQ01831 940 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-202ENST00000374541 MINK1Q8N4C8 1332 aaPredicted RBP7.97□□□□□ -1.13
PTPN3-202ENST00000374541 NCKAP5LQ9HCH0 1330 aa7.97□□□□□ -1.13
PTPN3-202ENST00000374541 HSP90AB1P08238 724 aaKnown RBP7.96□□□□□ -1.13
PTPN3-202ENST00000374541 CADPS2Q86UW7 1296 aa7.96□□□□□ -1.13
PTPN3-202ENST00000374541 KIF21AQ7Z4S6 1674 aa7.96□□□□□ -1.13
PTPN3-202ENST00000374541 OS9Q13438 667 aaPredicted RBP7.96□□□□□ -1.14
PTPN3-202ENST00000374541 UACAQ9BZF9 1416 aa7.96□□□□□ -1.14
PTPN3-202ENST00000374541 GOLGA6L4A6NEF3 574 aa7.96□□□□□ -1.14
PTPN3-202ENST00000374541 HIRIP3Q9BW71 556 aaPredicted RBP7.96□□□□□ -1.14
PTPN3-202ENST00000374541 UHRF1BP1Q6BDS2 1440 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 HSCBQ8IWL3 235 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 RBM33Q96EV2 1170 aaKnown RBP7.95□□□□□ -1.14
PTPN3-202ENST00000374541 CHMP3Q9Y3E7 222 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 MIER1Q8N108 512 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 MCCP23508 829 aa7.95□□□□□ -1.14
PTPN3-202ENST00000374541 ZNF772Q68DY9 489 aaPredicted RBP7.95□□□□□ -1.14
PTPN3-202ENST00000374541 RXRBP28702 533 aa7.94□□□□□ -1.14
PTPN3-202ENST00000374541 CTDP1Q9Y5B0 961 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-202ENST00000374541 MAGI1Q96QZ7 1491 aaPredicted RBP7.94□□□□□ -1.14
PTPN3-202ENST00000374541 TMF1P82094 1093 aa7.94□□□□□ -1.14
PTPN3-202ENST00000374541 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
PTPN3-202ENST00000374541 CLEC11AQ9Y240 323 aa7.94□□□□□ -1.14
PTPN3-202ENST00000374541 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
PTPN3-202ENST00000374541 NEUROD2Q15784 382 aa7.93□□□□□ -1.14
PTPN3-202ENST00000374541 RBM42Q9BTD8 480 aaKnown RBP7.93□□□□□ -1.14
PTPN3-202ENST00000374541 COG3Q96JB2 828 aa7.93□□□□□ -1.14
PTPN3-202ENST00000374541 IRX6P78412 446 aaPredicted RBP7.93□□□□□ -1.14
PTPN3-202ENST00000374541 TARBP1Q13395 1621 aaKnown RBP7.93□□□□□ -1.14
PTPN3-202ENST00000374541 PLCB2Q00722 1185 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 KIAA2012Q0VF49 1180 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 PMFBP1Q8TBY8 1022 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 HTATSF1O43719 755 aaKnown RBP7.92□□□□□ -1.14
PTPN3-202ENST00000374541 KCNJ4P48050 445 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 CERKQ8TCT0 537 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 DENND4BO75064 1496 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-202ENST00000374541 NLRP6P59044 892 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 FGD1P98174 961 aa7.92□□□□□ -1.14
PTPN3-202ENST00000374541 LRPPRCP42704 1394 aaKnown RBP7.91□□□□□ -1.14
PTPN3-202ENST00000374541 URB2Q14146 1524 aaKnown RBP7.91□□□□□ -1.14
PTPN3-202ENST00000374541 ARHGAP35Q9NRY4 1499 aa7.91□□□□□ -1.14
PTPN3-202ENST00000374541 GBP4Q96PP9 640 aa7.91□□□□□ -1.14
PTPN3-202ENST00000374541 EIF3AQ14152 1382 aaKnown RBP7.9□□□□□ -1.14
PTPN3-202ENST00000374541 SYAP1Q96A49 352 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-202ENST00000374541 TNNT3P45378 269 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-202ENST00000374541 PRXQ9BXM0 1461 aa7.9□□□□□ -1.14
PTPN3-202ENST00000374541 STK32BQ9NY57 414 aa7.9□□□□□ -1.15
PTPN3-202ENST00000374541 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.15
PTPN3-202ENST00000374541 CLSTN1O94985 981 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 NGEFQ8N5V2 710 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
PTPN3-202ENST00000374541 LRRIQ1Q96JM4 1722 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 CHMP4AQ9BY43 222 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 TEFQ10587 303 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 LRRC59Q96AG4 307 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms