RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 HECW2Q9P2P5 1572 aa24.07■■□□□ 1.44
PTPN20-203ENST00000374342 DIP2BQ9P265 1576 aa24.06■■□□□ 1.44
PTPN20-203ENST00000374342 E9PCH4 1651 aa24.02■■□□□ 1.44
PTPN20-203ENST00000374342 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
PTPN20-203ENST00000374342 ABCA6Q8N139 1617 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 TET3O43151 1660 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 RICTORQ6R327 1708 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 MIER1Q8N108 512 aa24■■□□□ 1.43
PTPN20-203ENST00000374342 PRDM15P57071 1507 aaPredicted RBP23.99■■□□□ 1.43
PTPN20-203ENST00000374342 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
PTPN20-203ENST00000374342 CCDC144AA2RUR9 1427 aa23.98■■□□□ 1.43
PTPN20-203ENST00000374342 DHX29Q7Z478 1369 aaKnown RBP23.98■■□□□ 1.43
PTPN20-203ENST00000374342 TSPOAP1O95153 1857 aa23.97■■□□□ 1.43
PTPN20-203ENST00000374342 VWDEQ8N2E2 1590 aa23.97■■□□□ 1.43
PTPN20-203ENST00000374342 MLH3Q9UHC1 1453 aa23.97■■□□□ 1.43
PTPN20-203ENST00000374342 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
PTPN20-203ENST00000374342 PLA2R1Q13018 1463 aa23.96■■□□□ 1.43
PTPN20-203ENST00000374342 SPHKAPQ2M3C7 1700 aa23.96■■□□□ 1.43
PTPN20-203ENST00000374342 A2MP01023 1474 aa23.95■■□□□ 1.42
PTPN20-203ENST00000374342 RNF17Q9BXT8 1623 aaKnown RBP23.95■■□□□ 1.42
PTPN20-203ENST00000374342 FRMPD1Q5SYB0 1578 aa23.94■■□□□ 1.42
PTPN20-203ENST00000374342 PPRC1Q5VV67 1664 aaKnown RBP23.93■■□□□ 1.42
PTPN20-203ENST00000374342 KANK1Q14678 1352 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 ATP10AO60312 1499 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 CEP152O94986 1710 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 KIF3BO15066 747 aa23.92■■□□□ 1.42
PTPN20-203ENST00000374342 DIP2CQ9Y2E4 1556 aa23.9■■□□□ 1.42
PTPN20-203ENST00000374342 BCORL1Q5H9F3 1711 aa23.9■■□□□ 1.42
PTPN20-203ENST00000374342 HSPA5P11021 654 aaKnown RBP23.89■■□□□ 1.42
PTPN20-203ENST00000374342 FAM69CQ0P6D2 419 aa23.89■■□□□ 1.42
PTPN20-203ENST00000374342 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
PTPN20-203ENST00000374342 TRPM2O94759 1503 aa23.88■■□□□ 1.41
PTPN20-203ENST00000374342 KIF13AQ9H1H9 1805 aa23.88■■□□□ 1.41
PTPN20-203ENST00000374342 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
PTPN20-203ENST00000374342 UHRF1BP1Q6BDS2 1440 aa23.88■■□□□ 1.41
PTPN20-203ENST00000374342 RAPGEF3O95398 923 aa23.86■■□□□ 1.41
PTPN20-203ENST00000374342 EFCAB6Q5THR3 1501 aa23.86■■□□□ 1.41
PTPN20-203ENST00000374342 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
PTPN20-203ENST00000374342 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
PTPN20-203ENST00000374342 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
PTPN20-203ENST00000374342 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
PTPN20-203ENST00000374342 ZMYM4Q5VZL5 1548 aa23.81■■□□□ 1.4
PTPN20-203ENST00000374342 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 KDM2AQ9Y2K7 1162 aa23.8■■□□□ 1.4
PTPN20-203ENST00000374342 PTPRTO14522 1441 aa23.79■■□□□ 1.4
PTPN20-203ENST00000374342 SPATA31E1Q6ZUB1 1445 aa23.77■■□□□ 1.4
PTPN20-203ENST00000374342 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
PTPN20-203ENST00000374342 YEATS2Q9ULM3 1422 aa23.76■■□□□ 1.39
PTPN20-203ENST00000374342 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
PTPN20-203ENST00000374342 CAMSAP1Q5T5Y3 1602 aa23.74■■□□□ 1.39
PTPN20-203ENST00000374342 USP47Q96K76 1375 aa23.74■■□□□ 1.39
PTPN20-203ENST00000374342 KIF1BO60333 1816 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 ABCC3O15438 1527 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 WASHC2AQ641Q2 1341 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 UGGT1Q9NYU2 1555 aa23.72■■□□□ 1.39
PTPN20-203ENST00000374342 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
PTPN20-203ENST00000374342 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
PTPN20-203ENST00000374342 GGT6Q6P531 493 aa23.69■■□□□ 1.38
PTPN20-203ENST00000374342 CFAP65Q6ZU64 1925 aaKnown RBP23.68■■□□□ 1.38
PTPN20-203ENST00000374342 MADDQ8WXG6 1647 aa23.68■■□□□ 1.38
PTPN20-203ENST00000374342 MROH2AA6NES4 1674 aa23.68■■□□□ 1.38
PTPN20-203ENST00000374342 LAMC1P11047 1609 aa23.68■■□□□ 1.38
PTPN20-203ENST00000374342 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
PTPN20-203ENST00000374342 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
PTPN20-203ENST00000374342 CARD11Q9BXL7 1154 aa23.67■■□□□ 1.38
PTPN20-203ENST00000374342 NEURL4Q96JN8 1562 aa23.66■■□□□ 1.38
PTPN20-203ENST00000374342 NPATQ14207 1427 aa23.65■■□□□ 1.38
PTPN20-203ENST00000374342 SIGLEC1Q9BZZ2 1709 aa23.64■■□□□ 1.37
PTPN20-203ENST00000374342 C11orf95C9JLR9 678 aaPredicted RBP23.63■■□□□ 1.37
PTPN20-203ENST00000374342 IFT172Q9UG01 1749 aa23.63■■□□□ 1.37
PTPN20-203ENST00000374342 CNTLNQ9NXG0 1405 aa23.62■■□□□ 1.37
PTPN20-203ENST00000374342 WASHC2CQ9Y4E1 1318 aa23.61■■□□□ 1.37
PTPN20-203ENST00000374342 REREQ9P2R6 1566 aa23.61■■□□□ 1.37
PTPN20-203ENST00000374342 CENPBP07199 599 aaPredicted RBP23.61■■□□□ 1.37
PTPN20-203ENST00000374342 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
PTPN20-203ENST00000374342 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
PTPN20-203ENST00000374342 GPRASP1Q5JY77 1395 aa23.58■■□□□ 1.37
PTPN20-203ENST00000374342 ANP32CO43423 234 aa23.58■■□□□ 1.37
PTPN20-203ENST00000374342 ADGRB3O60242 1522 aa23.58■■□□□ 1.37
PTPN20-203ENST00000374342 SYNMO15061 1565 aa23.55■■□□□ 1.36
PTPN20-203ENST00000374342 COL17A1Q9UMD9 1497 aaPredicted RBP23.55■■□□□ 1.36
PTPN20-203ENST00000374342 NBPF1Q3BBV0 1214 aa23.54■■□□□ 1.36
PTPN20-203ENST00000374342 PIK3C2BO00750 1634 aa23.54■■□□□ 1.36
PTPN20-203ENST00000374342 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 AGLP35573 1532 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 MYOM2P54296 1465 aa23.53■■□□□ 1.36
PTPN20-203ENST00000374342 PREX1Q8TCU6 1659 aa23.52■■□□□ 1.36
PTPN20-203ENST00000374342 PPLO60437 1756 aa23.51■■□□□ 1.35
PTPN20-203ENST00000374342 ST20-MTHFSA0A0A6YYL1 179 aa23.51■■□□□ 1.35
PTPN20-203ENST00000374342 NOS1P29475 1434 aa23.5■■□□□ 1.35
PTPN20-203ENST00000374342 ARHGAP31Q2M1Z3 1444 aa23.5■■□□□ 1.35
PTPN20-203ENST00000374342 CLTCQ00610 1675 aaKnown RBP23.49■■□□□ 1.35
PTPN20-203ENST00000374342 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
PTPN20-203ENST00000374342 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
PTPN20-203ENST00000374342 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.35
PTPN20-203ENST00000374342 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
PTPN20-203ENST00000374342 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms