RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
LDLRAP1-201ENST00000374338 ADGRL2O95490 1459 aa23.19■■□□□ 1.3
LDLRAP1-201ENST00000374338 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
LDLRAP1-201ENST00000374338 NPM2Q86SE8 214 aaKnown RBP23.18■■□□□ 1.3
LDLRAP1-201ENST00000374338 MBD5Q9P267 1494 aa23.17■■□□□ 1.3
LDLRAP1-201ENST00000374338 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
LDLRAP1-201ENST00000374338 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
LDLRAP1-201ENST00000374338 CROCC2H7BZ55 1655 aa23.15■■□□□ 1.3
LDLRAP1-201ENST00000374338 ROCK2O75116 1388 aaKnown RBP23.15■■□□□ 1.3
LDLRAP1-201ENST00000374338 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
LDLRAP1-201ENST00000374338 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
LDLRAP1-201ENST00000374338 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
LDLRAP1-201ENST00000374338 SYCP2Q9BX26 1530 aa23.14■■□□□ 1.29
LDLRAP1-201ENST00000374338 AFAP1Q8N556 730 aa23.13■■□□□ 1.29
LDLRAP1-201ENST00000374338 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
LDLRAP1-201ENST00000374338 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
LDLRAP1-201ENST00000374338 CHD1O14646 1710 aa23.12■■□□□ 1.29
LDLRAP1-201ENST00000374338 PKNOX2Q96KN3 472 aa23.11■■□□□ 1.29
LDLRAP1-201ENST00000374338 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
LDLRAP1-201ENST00000374338 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
LDLRAP1-201ENST00000374338 TTC37Q6PGP7 1564 aa23.09■■□□□ 1.29
LDLRAP1-201ENST00000374338 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.29
LDLRAP1-201ENST00000374338 CCDC141Q6ZP82 1450 aa23.08■■□□□ 1.29
LDLRAP1-201ENST00000374338 NEFMP07197 916 aa23.08■■□□□ 1.28
LDLRAP1-201ENST00000374338 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.28
LDLRAP1-201ENST00000374338 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
LDLRAP1-201ENST00000374338 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
LDLRAP1-201ENST00000374338 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
LDLRAP1-201ENST00000374338 FAM135AQ9P2D6 1515 aa23.04■■□□□ 1.28
LDLRAP1-201ENST00000374338 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
LDLRAP1-201ENST00000374338 KDM5CP41229 1560 aa23.04■■□□□ 1.28
LDLRAP1-201ENST00000374338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
LDLRAP1-201ENST00000374338 ARHGEF12Q9NZN5 1544 aa23.02■■□□□ 1.28
LDLRAP1-201ENST00000374338 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.27
LDLRAP1-201ENST00000374338 SHANK2Q9UPX8 1470 aa23■■□□□ 1.27
LDLRAP1-201ENST00000374338 PLA2R1Q13018 1463 aa22.99■■□□□ 1.27
LDLRAP1-201ENST00000374338 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
LDLRAP1-201ENST00000374338 TRAPPC8Q9Y2L5 1435 aa22.96■■□□□ 1.27
LDLRAP1-201ENST00000374338 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.27
LDLRAP1-201ENST00000374338 PREX2Q70Z35 1606 aa22.94■■□□□ 1.26
LDLRAP1-201ENST00000374338 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
LDLRAP1-201ENST00000374338 DISP3Q9P2K9 1392 aa22.93■■□□□ 1.26
LDLRAP1-201ENST00000374338 PANK3Q9H999 370 aa22.93■■□□□ 1.26
LDLRAP1-201ENST00000374338 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
LDLRAP1-201ENST00000374338 PRAG1Q86YV5 1406 aa22.91■■□□□ 1.26
LDLRAP1-201ENST00000374338 SKAP1Q86WV1 359 aa22.9■■□□□ 1.26
LDLRAP1-201ENST00000374338 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
LDLRAP1-201ENST00000374338 A2MP01023 1474 aa22.9■■□□□ 1.26
LDLRAP1-201ENST00000374338 ARHGEF5Q12774 1597 aa22.9■■□□□ 1.26
LDLRAP1-201ENST00000374338 NUDCQ9Y266 331 aa22.89■■□□□ 1.26
LDLRAP1-201ENST00000374338 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
LDLRAP1-201ENST00000374338 RSPH6AQ9H0K4 717 aa22.89■■□□□ 1.25
LDLRAP1-201ENST00000374338 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
LDLRAP1-201ENST00000374338 KIF3BO15066 747 aa22.87■■□□□ 1.25
LDLRAP1-201ENST00000374338 GSE1Q14687 1217 aa22.87■■□□□ 1.25
LDLRAP1-201ENST00000374338 TESK2Q96S53 571 aa22.87■■□□□ 1.25
LDLRAP1-201ENST00000374338 ABCC2Q92887 1545 aa22.86■■□□□ 1.25
LDLRAP1-201ENST00000374338 KDM5DQ9BY66 1539 aa22.86■■□□□ 1.25
LDLRAP1-201ENST00000374338 MYBBP1AQ9BQG0 1328 aaKnown RBP22.86■■□□□ 1.25
LDLRAP1-201ENST00000374338 POLR1AO95602 1720 aaPredicted RBP22.86■■□□□ 1.25
LDLRAP1-201ENST00000374338 PER1O15534 1290 aaPredicted RBP22.83■■□□□ 1.25
LDLRAP1-201ENST00000374338 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.24
LDLRAP1-201ENST00000374338 PLCH2O75038 1416 aa22.81■■□□□ 1.24
LDLRAP1-201ENST00000374338 PLIN1O60240 522 aa22.81■■□□□ 1.24
LDLRAP1-201ENST00000374338 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
LDLRAP1-201ENST00000374338 EXOC6Q8TAG9 804 aa22.79■■□□□ 1.24
LDLRAP1-201ENST00000374338 KTN1Q86UP2 1357 aaKnown RBP22.79■■□□□ 1.24
LDLRAP1-201ENST00000374338 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
LDLRAP1-201ENST00000374338 RALBP1Q15311 655 aa22.78■■□□□ 1.24
LDLRAP1-201ENST00000374338 SMG6Q86US8 1419 aaKnown RBP22.78■■□□□ 1.24
LDLRAP1-201ENST00000374338 SLC4A3P48751 1232 aa22.78■■□□□ 1.24
LDLRAP1-201ENST00000374338 ZCCHC11Q5TAX3 1644 aaKnown RBP22.78■■□□□ 1.24
LDLRAP1-201ENST00000374338 SCAPERQ9BY12 1400 aa22.77■■□□□ 1.24
LDLRAP1-201ENST00000374338 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
LDLRAP1-201ENST00000374338 TMF1P82094 1093 aa22.77■■□□□ 1.24
LDLRAP1-201ENST00000374338 PDE4AP27815 886 aa22.76■■□□□ 1.23
LDLRAP1-201ENST00000374338 NLRP13Q86W25 1043 aa22.76■■□□□ 1.23
LDLRAP1-201ENST00000374338 RNF123Q5XPI4 1314 aa22.76■■□□□ 1.23
LDLRAP1-201ENST00000374338 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
LDLRAP1-201ENST00000374338 FRAT1Q92837 279 aaPredicted RBP22.75■■□□□ 1.23
LDLRAP1-201ENST00000374338 TRPM1Q7Z4N2 1603 aa22.74■■□□□ 1.23
LDLRAP1-201ENST00000374338 CFAP70Q5T0N1 1121 aa22.74■■□□□ 1.23
LDLRAP1-201ENST00000374338 ERBINQ96RT1 1412 aa22.73■■□□□ 1.23
LDLRAP1-201ENST00000374338 FAM43AQ8N2R8 423 aa22.72■■□□□ 1.23
LDLRAP1-201ENST00000374338 GGT6Q6P531 493 aa22.71■■□□□ 1.23
LDLRAP1-201ENST00000374338 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
LDLRAP1-201ENST00000374338 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
LDLRAP1-201ENST00000374338 DUOX2Q9NRD8 1548 aa22.7■■□□□ 1.22
LDLRAP1-201ENST00000374338 ZMYND15Q9H091 742 aa22.7■■□□□ 1.22
LDLRAP1-201ENST00000374338 ADAMTS8Q9UP79 889 aa22.69■■□□□ 1.22
LDLRAP1-201ENST00000374338 NFKBIBQ15653 356 aa22.68■■□□□ 1.22
LDLRAP1-201ENST00000374338 UNC13BO14795 1591 aa22.68■■□□□ 1.22
LDLRAP1-201ENST00000374338 LRPPRCP42704 1394 aaKnown RBP22.68■■□□□ 1.22
LDLRAP1-201ENST00000374338 CCDC146Q8IYE0 955 aa22.68■■□□□ 1.22
LDLRAP1-201ENST00000374338 UGGT1Q9NYU2 1555 aa22.68■■□□□ 1.22
LDLRAP1-201ENST00000374338 PARD3Q8TEW0 1356 aa22.67■■□□□ 1.22
LDLRAP1-201ENST00000374338 RCAN3Q9UKA8 241 aa22.67■■□□□ 1.22
LDLRAP1-201ENST00000374338 KNSTRNQ9Y448 316 aa22.67■■□□□ 1.22
LDLRAP1-201ENST00000374338 TCERG1O14776 1098 aaKnown RBP22.66■■□□□ 1.22
LDLRAP1-201ENST00000374338 ADGRF5Q8IZF2 1346 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms