RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
PRPF4-201ENST00000374198 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
PRPF4-201ENST00000374198 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
PRPF4-201ENST00000374198 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
PRPF4-201ENST00000374198 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
PRPF4-201ENST00000374198 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
PRPF4-201ENST00000374198 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
PRPF4-201ENST00000374198 RRP9O43818 475 aaKnown RBP16.92■□□□□ 0.3
PRPF4-201ENST00000374198 HSP90AA2PQ14568 343 aaPredicted RBP16.92■□□□□ 0.3
PRPF4-201ENST00000374198 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
PRPF4-201ENST00000374198 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
PRPF4-201ENST00000374198 MAP3K4Q9Y6R4 1608 aa16.9■□□□□ 0.3
PRPF4-201ENST00000374198 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
PRPF4-201ENST00000374198 NAP1L5Q96NT1 182 aaPredicted RBP16.88■□□□□ 0.29
PRPF4-201ENST00000374198 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
PRPF4-201ENST00000374198 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
PRPF4-201ENST00000374198 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
PRPF4-201ENST00000374198 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
PRPF4-201ENST00000374198 TEX14Q8IWB6 1497 aa16.87■□□□□ 0.29
PRPF4-201ENST00000374198 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
PRPF4-201ENST00000374198 POGKQ9P215 609 aa16.86■□□□□ 0.29
PRPF4-201ENST00000374198 PPRC1Q5VV67 1664 aaKnown RBP16.86■□□□□ 0.29
PRPF4-201ENST00000374198 MTUS2Q5JR59 1369 aa16.86■□□□□ 0.29
PRPF4-201ENST00000374198 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
PRPF4-201ENST00000374198 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
PRPF4-201ENST00000374198 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
PRPF4-201ENST00000374198 KDM6BO15054 1643 aa16.85■□□□□ 0.29
PRPF4-201ENST00000374198 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
PRPF4-201ENST00000374198 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
PRPF4-201ENST00000374198 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
PRPF4-201ENST00000374198 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
PRPF4-201ENST00000374198 RPRD2Q5VT52 1461 aaKnown RBP16.83■□□□□ 0.29
PRPF4-201ENST00000374198 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
PRPF4-201ENST00000374198 FOXD1Q16676 465 aa16.83■□□□□ 0.28
PRPF4-201ENST00000374198 PLIN1O60240 522 aa16.82■□□□□ 0.28
PRPF4-201ENST00000374198 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
PRPF4-201ENST00000374198 GCC2Q8IWJ2 1684 aa16.82■□□□□ 0.28
PRPF4-201ENST00000374198 CLCN1P35523 988 aa16.82■□□□□ 0.28
PRPF4-201ENST00000374198 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
PRPF4-201ENST00000374198 ABCA9Q8IUA7 1624 aa16.81■□□□□ 0.28
PRPF4-201ENST00000374198 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
PRPF4-201ENST00000374198 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
PRPF4-201ENST00000374198 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
PRPF4-201ENST00000374198 CHIC2Q9UKJ5 165 aa16.8■□□□□ 0.28
PRPF4-201ENST00000374198 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
PRPF4-201ENST00000374198 BCORL1Q5H9F3 1711 aa16.78■□□□□ 0.28
PRPF4-201ENST00000374198 LRRIQ1Q96JM4 1722 aa16.78■□□□□ 0.28
PRPF4-201ENST00000374198 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
PRPF4-201ENST00000374198 MYBBP1AQ9BQG0 1328 aaKnown RBP16.78■□□□□ 0.28
PRPF4-201ENST00000374198 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
PRPF4-201ENST00000374198 CDCA7LQ96GN5 454 aa16.77■□□□□ 0.27
PRPF4-201ENST00000374198 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
PRPF4-201ENST00000374198 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
PRPF4-201ENST00000374198 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
PRPF4-201ENST00000374198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRPF4-201ENST00000374198 USP47Q96K76 1375 aa16.75■□□□□ 0.27
PRPF4-201ENST00000374198 RALBP1Q15311 655 aa16.74■□□□□ 0.27
PRPF4-201ENST00000374198 COL17A1Q9UMD9 1497 aaPredicted RBP16.74■□□□□ 0.27
PRPF4-201ENST00000374198 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
PRPF4-201ENST00000374198 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRPF4-201ENST00000374198 KIF14Q15058 1648 aa16.72■□□□□ 0.27
PRPF4-201ENST00000374198 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.27
PRPF4-201ENST00000374198 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.26
PRPF4-201ENST00000374198 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
PRPF4-201ENST00000374198 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
PRPF4-201ENST00000374198 NEO1Q92859 1461 aa16.69■□□□□ 0.26
PRPF4-201ENST00000374198 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
PRPF4-201ENST00000374198 FANCAO15360 1455 aa16.68■□□□□ 0.26
PRPF4-201ENST00000374198 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
PRPF4-201ENST00000374198 PLCH2O75038 1416 aa16.67■□□□□ 0.26
PRPF4-201ENST00000374198 RGS3P49796 1198 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 ARAP3Q8WWN8 1544 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 BECN1Q14457 450 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 ARXQ96QS3 562 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 PANK2Q9BZ23 570 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 KDM5CP41229 1560 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 USP19O94966 1318 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
PRPF4-201ENST00000374198 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
PRPF4-201ENST00000374198 EFCAB2Q5VUJ9 269 aa16.65■□□□□ 0.26
PRPF4-201ENST00000374198 SLKQ9H2G2 1235 aaPredicted RBP16.65■□□□□ 0.26
PRPF4-201ENST00000374198 MYO5CQ9NQX4 1742 aa16.65■□□□□ 0.26
PRPF4-201ENST00000374198 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
PRPF4-201ENST00000374198 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
PRPF4-201ENST00000374198 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
PRPF4-201ENST00000374198 ARHGAP5Q13017 1502 aa16.63■□□□□ 0.25
PRPF4-201ENST00000374198 PDCL3Q9H2J4 239 aa16.63■□□□□ 0.25
PRPF4-201ENST00000374198 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
PRPF4-201ENST00000374198 ZNF326Q5BKZ1 582 aaKnown RBP16.61■□□□□ 0.25
PRPF4-201ENST00000374198 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
PRPF4-201ENST00000374198 TPM2P07951 284 aa16.6■□□□□ 0.25
PRPF4-201ENST00000374198 INSRP06213 1382 aa16.6■□□□□ 0.25
PRPF4-201ENST00000374198 ESPNB1AK53 854 aa16.6■□□□□ 0.25
PRPF4-201ENST00000374198 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
PRPF4-201ENST00000374198 SCAPERQ9BY12 1400 aa16.59■□□□□ 0.25
PRPF4-201ENST00000374198 PARD3Q8TEW0 1356 aa16.59■□□□□ 0.25
PRPF4-201ENST00000374198 MRE11P49959 708 aa16.58■□□□□ 0.25
PRPF4-201ENST00000374198 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.25
PRPF4-201ENST00000374198 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms