RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 RWDD1Q9H446 243 aaPredicted RBP6.69□□□□□ -1.34
A1CF-205ENST00000374001 EPRSP07814 1512 aaKnown RBP6.69□□□□□ -1.34
A1CF-205ENST00000374001 AKNAQ7Z591 1439 aa6.69□□□□□ -1.34
A1CF-205ENST00000374001 KIF3BO15066 747 aa6.69□□□□□ -1.34
A1CF-205ENST00000374001 OSCARQ8IYS5 282 aa6.69□□□□□ -1.34
A1CF-205ENST00000374001 CC2D1BQ5T0F9 858 aaKnown RBP6.69□□□□□ -1.34
A1CF-205ENST00000374001 NRDCO43847 1150 aa6.69□□□□□ -1.34
A1CF-205ENST00000374001 NOP58Q9Y2X3 529 aaKnown RBP6.68□□□□□ -1.34
A1CF-205ENST00000374001 C9orf84Q5VXU9 1444 aa6.68□□□□□ -1.34
A1CF-205ENST00000374001 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
A1CF-205ENST00000374001 GOLGA6L6A8MZA4 724 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 GOLGA2Q08379 1002 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 CHMP4CQ96CF2 233 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 HMMRO75330 724 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 GGT6Q6P531 493 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 HSCBQ8IWL3 235 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 BCL11AQ9H165 835 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.67□□□□□ -1.34
A1CF-205ENST00000374001 HNRNPMP52272 730 aaKnown RBP eCLIP6.67□□□□□ -1.34
A1CF-205ENST00000374001 DAPK1P53355 1430 aa6.67□□□□□ -1.34
A1CF-205ENST00000374001 CFAP65Q6ZU64 1925 aaKnown RBP6.66□□□□□ -1.34
A1CF-205ENST00000374001 RAPGEF6Q8TEU7 1601 aa6.66□□□□□ -1.34
A1CF-205ENST00000374001 KIAA1107Q9UPP5 1409 aa6.66□□□□□ -1.34
A1CF-205ENST00000374001 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
A1CF-205ENST00000374001 ADGBQ8N7X0 1667 aa6.66□□□□□ -1.34
A1CF-205ENST00000374001 BRD4O60885 1362 aaPredicted RBP6.66□□□□□ -1.34
A1CF-205ENST00000374001 CDK11BP21127 795 aaKnown RBP6.66□□□□□ -1.34
A1CF-205ENST00000374001 GPATCH3Q96I76 525 aa6.65□□□□□ -1.34
A1CF-205ENST00000374001 SNAPC4Q5SXM2 1469 aa6.65□□□□□ -1.34
A1CF-205ENST00000374001 E9PSI1 815 aa6.65□□□□□ -1.34
A1CF-205ENST00000374001 FRAT1Q92837 279 aaPredicted RBP6.64□□□□□ -1.35
A1CF-205ENST00000374001 USP35Q9P2H5 1018 aa6.64□□□□□ -1.35
A1CF-205ENST00000374001 PRG4Q92954 1404 aaPredicted RBP6.64□□□□□ -1.35
A1CF-205ENST00000374001 PRKRIP1Q9H875 184 aaPredicted RBP6.64□□□□□ -1.35
A1CF-205ENST00000374001 GRIN2AQ12879 1464 aa6.64□□□□□ -1.35
A1CF-205ENST00000374001 EIF2AK4Q9P2K8 1649 aaKnown RBP6.64□□□□□ -1.35
A1CF-205ENST00000374001 U2AF1L5P0DN76 240 aaPredicted RBP6.64□□□□□ -1.35
A1CF-205ENST00000374001 U2AF1Q01081 240 aaKnown RBP eCLIP6.64□□□□□ -1.35
A1CF-205ENST00000374001 HTATSF1O43719 755 aaKnown RBP6.63□□□□□ -1.35
A1CF-205ENST00000374001 NINLQ9Y2I6 1382 aa6.63□□□□□ -1.35
A1CF-205ENST00000374001 HSP90AB1P08238 724 aaKnown RBP6.63□□□□□ -1.35
A1CF-205ENST00000374001 GBP4Q96PP9 640 aa6.63□□□□□ -1.35
A1CF-205ENST00000374001 STK31Q9BXU1 1019 aa6.63□□□□□ -1.35
A1CF-205ENST00000374001 CENPJQ9HC77 1338 aaPredicted RBP6.63□□□□□ -1.35
A1CF-205ENST00000374001 OS9Q13438 667 aaPredicted RBP6.63□□□□□ -1.35
A1CF-205ENST00000374001 NBR1Q14596 966 aa6.63□□□□□ -1.35
A1CF-205ENST00000374001 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
A1CF-205ENST00000374001 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
A1CF-205ENST00000374001 CCDC7Q96M83 1385 aa6.63□□□□□ -1.35
A1CF-205ENST00000374001 SYAP1Q96A49 352 aaPredicted RBP6.63□□□□□ -1.35
A1CF-205ENST00000374001 CENPQQ7L2Z9 268 aaPredicted RBP6.62□□□□□ -1.35
A1CF-205ENST00000374001 ANKRD30BQ9BXX2 1392 aa6.62□□□□□ -1.35
A1CF-205ENST00000374001 ST20-MTHFSA0A0A6YYL1 179 aa6.62□□□□□ -1.35
A1CF-205ENST00000374001 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
A1CF-205ENST00000374001 CCDC34Q96HJ3 373 aa6.62□□□□□ -1.35
A1CF-205ENST00000374001 PLPPR3Q6T4P5 718 aa6.62□□□□□ -1.35
A1CF-205ENST00000374001 LAS1LQ9Y4W2 734 aaKnown RBP6.62□□□□□ -1.35
A1CF-205ENST00000374001 FOXD1Q16676 465 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 CSPP1Q1MSJ5 1256 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 KCNJ4P48050 445 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 CAMSAP2Q08AD1 1489 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 KIF3AQ9Y496 699 aa6.61□□□□□ -1.35
A1CF-205ENST00000374001 FGD1P98174 961 aa6.6□□□□□ -1.35
A1CF-205ENST00000374001 LRRFIP1Q32MZ4 808 aaKnown RBP6.6□□□□□ -1.35
A1CF-205ENST00000374001 SLC52A1Q9NWF4 448 aa6.6□□□□□ -1.35
A1CF-205ENST00000374001 FAM135AQ9P2D6 1515 aa6.6□□□□□ -1.35
A1CF-205ENST00000374001 RGS3P49796 1198 aa6.6□□□□□ -1.35
A1CF-205ENST00000374001 CT47B1P0C2W7 299 aaPredicted RBP6.6□□□□□ -1.35
A1CF-205ENST00000374001 TNNT2P45379 298 aaPredicted RBP6.6□□□□□ -1.35
A1CF-205ENST00000374001 KIF16BQ96L93 1317 aa6.6□□□□□ -1.35
A1CF-205ENST00000374001 GCC2Q8IWJ2 1684 aa6.6□□□□□ -1.35
A1CF-205ENST00000374001 UGGT2Q9NYU1 1516 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 PHF14O94880 888 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 CHAF1AQ13111 956 aaPredicted RBP6.59□□□□□ -1.35
A1CF-205ENST00000374001 B4GALNT3Q6L9W6 998 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 MYO5CQ9NQX4 1742 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 ADAMTS12P58397 1594 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 NAIPQ13075 1403 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 GOLGA6L4A6NEF3 574 aa6.59□□□□□ -1.35
A1CF-205ENST00000374001 SMC4Q9NTJ3 1288 aa6.59□□□□□ -1.36
A1CF-205ENST00000374001 PTMAP06454 111 aaKnown RBP6.58□□□□□ -1.36
A1CF-205ENST00000374001 COG3Q96JB2 828 aa6.58□□□□□ -1.36
A1CF-205ENST00000374001 PANK3Q9H999 370 aa6.58□□□□□ -1.36
A1CF-205ENST00000374001 ANO8Q9HCE9 1232 aaPredicted RBP6.58□□□□□ -1.36
A1CF-205ENST00000374001 POGZQ7Z3K3 1410 aa6.58□□□□□ -1.36
A1CF-205ENST00000374001 CFAP74Q9C0B2 1584 aa6.58□□□□□ -1.36
A1CF-205ENST00000374001 URB2Q14146 1524 aaKnown RBP6.58□□□□□ -1.36
A1CF-205ENST00000374001 STK26Q9P289 416 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 DDX19BQ9UMR2 479 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 ITPRIPQ8IWB1 547 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 RBM19Q9Y4C8 960 aaKnown RBP6.57□□□□□ -1.36
A1CF-205ENST00000374001 KIF1BO60333 1816 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 ATP6V1DQ9Y5K8 247 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 ST18O60284 1047 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 ZBTB7CA1YPR0 619 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 LMOD2Q6P5Q4 547 aa6.57□□□□□ -1.36
A1CF-205ENST00000374001 NGDNQ8NEJ9 315 aaKnown RBP6.57□□□□□ -1.36
A1CF-205ENST00000374001 IPO9Q96P70 1041 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms