RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 MLH3Q9UHC1 1453 aa22.4■■□□□ 1.18
HDAC8-209ENST00000373589 DIP2BQ9P265 1576 aa22.39■■□□□ 1.17
HDAC8-209ENST00000373589 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
HDAC8-209ENST00000373589 PLA2R1Q13018 1463 aa22.37■■□□□ 1.17
HDAC8-209ENST00000373589 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
HDAC8-209ENST00000373589 ATP10AO60312 1499 aa22.35■■□□□ 1.17
HDAC8-209ENST00000373589 VWDEQ8N2E2 1590 aa22.34■■□□□ 1.17
HDAC8-209ENST00000373589 HECW2Q9P2P5 1572 aa22.34■■□□□ 1.17
HDAC8-209ENST00000373589 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
HDAC8-209ENST00000373589 NBPF8Q3BBV2 869 aa22.34■■□□□ 1.17
HDAC8-209ENST00000373589 A2MP01023 1474 aa22.32■■□□□ 1.16
HDAC8-209ENST00000373589 PRDM15P57071 1507 aaPredicted RBP22.31■■□□□ 1.16
HDAC8-209ENST00000373589 KIF3BO15066 747 aa22.31■■□□□ 1.16
HDAC8-209ENST00000373589 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
HDAC8-209ENST00000373589 MROH1Q8NDA8 1641 aa22.3■■□□□ 1.16
HDAC8-209ENST00000373589 RAPGEF3O95398 923 aa22.29■■□□□ 1.16
HDAC8-209ENST00000373589 RICTORQ6R327 1708 aa22.28■■□□□ 1.16
HDAC8-209ENST00000373589 FRMPD1Q5SYB0 1578 aa22.28■■□□□ 1.16
HDAC8-209ENST00000373589 KANK1Q14678 1352 aa22.28■■□□□ 1.16
HDAC8-209ENST00000373589 UHRF1BP1Q6BDS2 1440 aa22.27■■□□□ 1.16
HDAC8-209ENST00000373589 MIER1Q8N108 512 aa22.27■■□□□ 1.16
HDAC8-209ENST00000373589 HIRIP3Q9BW71 556 aaPredicted RBP22.27■■□□□ 1.16
HDAC8-209ENST00000373589 ABCA6Q8N139 1617 aa22.26■■□□□ 1.15
HDAC8-209ENST00000373589 E9PCH4 1651 aa22.26■■□□□ 1.15
HDAC8-209ENST00000373589 TET3O43151 1660 aa22.26■■□□□ 1.15
HDAC8-209ENST00000373589 RNF17Q9BXT8 1623 aaKnown RBP22.25■■□□□ 1.15
HDAC8-209ENST00000373589 PPRC1Q5VV67 1664 aaKnown RBP22.25■■□□□ 1.15
HDAC8-209ENST00000373589 BCORL1Q5H9F3 1711 aa22.24■■□□□ 1.15
HDAC8-209ENST00000373589 PTPRTO14522 1441 aa22.23■■□□□ 1.15
HDAC8-209ENST00000373589 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
HDAC8-209ENST00000373589 EIF4G2P78344 907 aaKnown RBP eCLIP22.23■■□□□ 1.15
HDAC8-209ENST00000373589 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
HDAC8-209ENST00000373589 LMTK2Q8IWU2 1503 aa22.21■■□□□ 1.15
HDAC8-209ENST00000373589 TRPM2O94759 1503 aa22.2■■□□□ 1.14
HDAC8-209ENST00000373589 ZMYM4Q5VZL5 1548 aa22.18■■□□□ 1.14
HDAC8-209ENST00000373589 SPATA31E1Q6ZUB1 1445 aa22.18■■□□□ 1.14
HDAC8-209ENST00000373589 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
HDAC8-209ENST00000373589 EFCAB6Q5THR3 1501 aa22.17■■□□□ 1.14
HDAC8-209ENST00000373589 SPHKAPQ2M3C7 1700 aa22.16■■□□□ 1.14
HDAC8-209ENST00000373589 RALGAPBQ86X10 1494 aa22.16■■□□□ 1.14
HDAC8-209ENST00000373589 TSPOAP1O95153 1857 aa22.16■■□□□ 1.14
HDAC8-209ENST00000373589 KIF13AQ9H1H9 1805 aa22.16■■□□□ 1.14
HDAC8-209ENST00000373589 YEATS2Q9ULM3 1422 aa22.15■■□□□ 1.14
HDAC8-209ENST00000373589 DDX10Q13206 875 aaKnown RBP22.14■■□□□ 1.14
HDAC8-209ENST00000373589 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
HDAC8-209ENST00000373589 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
HDAC8-209ENST00000373589 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
HDAC8-209ENST00000373589 PRAG1Q86YV5 1406 aa22.11■■□□□ 1.13
HDAC8-209ENST00000373589 CEP152O94986 1710 aa22.1■■□□□ 1.13
HDAC8-209ENST00000373589 CLTCL1P53675 1640 aa22.1■■□□□ 1.13
HDAC8-209ENST00000373589 GGT6Q6P531 493 aa22.09■■□□□ 1.13
HDAC8-209ENST00000373589 ABCC3O15438 1527 aa22.08■■□□□ 1.13
HDAC8-209ENST00000373589 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.12
HDAC8-209ENST00000373589 USP47Q96K76 1375 aa22.07■■□□□ 1.12
HDAC8-209ENST00000373589 NEURL4Q96JN8 1562 aa22.07■■□□□ 1.12
HDAC8-209ENST00000373589 NPATQ14207 1427 aa22.05■■□□□ 1.12
HDAC8-209ENST00000373589 TRPM1Q7Z4N2 1603 aa22.04■■□□□ 1.12
HDAC8-209ENST00000373589 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
HDAC8-209ENST00000373589 REREQ9P2R6 1566 aa22.03■■□□□ 1.12
HDAC8-209ENST00000373589 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
HDAC8-209ENST00000373589 C11orf95C9JLR9 678 aaPredicted RBP22.03■■□□□ 1.12
HDAC8-209ENST00000373589 CARD11Q9BXL7 1154 aa22.03■■□□□ 1.12
HDAC8-209ENST00000373589 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
HDAC8-209ENST00000373589 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
HDAC8-209ENST00000373589 STAC3Q96MF2 364 aa22.01■■□□□ 1.11
HDAC8-209ENST00000373589 UGGT1Q9NYU2 1555 aa22■■□□□ 1.11
HDAC8-209ENST00000373589 ROCK2O75116 1388 aaKnown RBP22■■□□□ 1.11
HDAC8-209ENST00000373589 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
HDAC8-209ENST00000373589 ZC3H13Q5T200 1668 aaKnown RBP21.99■■□□□ 1.11
HDAC8-209ENST00000373589 ARHGAP31Q2M1Z3 1444 aa21.99■■□□□ 1.11
HDAC8-209ENST00000373589 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
HDAC8-209ENST00000373589 AGLP35573 1532 aa21.98■■□□□ 1.11
HDAC8-209ENST00000373589 LAMC1P11047 1609 aa21.97■■□□□ 1.11
HDAC8-209ENST00000373589 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
HDAC8-209ENST00000373589 NOS1P29475 1434 aa21.96■■□□□ 1.11
HDAC8-209ENST00000373589 KIF7Q2M1P5 1343 aa21.96■■□□□ 1.11
HDAC8-209ENST00000373589 MADDQ8WXG6 1647 aa21.95■■□□□ 1.1
HDAC8-209ENST00000373589 NBPF1Q3BBV0 1214 aa21.94■■□□□ 1.1
HDAC8-209ENST00000373589 KIF1BO60333 1816 aa21.94■■□□□ 1.1
HDAC8-209ENST00000373589 ARHGEF40Q8TER5 1519 aa21.93■■□□□ 1.1
HDAC8-209ENST00000373589 ADGRB3O60242 1522 aa21.92■■□□□ 1.1
HDAC8-209ENST00000373589 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
HDAC8-209ENST00000373589 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
HDAC8-209ENST00000373589 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
HDAC8-209ENST00000373589 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
HDAC8-209ENST00000373589 MYOM2P54296 1465 aa21.9■■□□□ 1.1
HDAC8-209ENST00000373589 ANP32CO43423 234 aa21.89■■□□□ 1.1
HDAC8-209ENST00000373589 MROH2AA6NES4 1674 aa21.89■■□□□ 1.1
HDAC8-209ENST00000373589 SYNMO15061 1565 aa21.88■■□□□ 1.09
HDAC8-209ENST00000373589 PIK3C2BO00750 1634 aa21.88■■□□□ 1.09
HDAC8-209ENST00000373589 IFT172Q9UG01 1749 aa21.87■■□□□ 1.09
HDAC8-209ENST00000373589 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
HDAC8-209ENST00000373589 NRXN1Q9ULB1 1477 aa21.84■■□□□ 1.09
HDAC8-209ENST00000373589 KIAA1210Q9ULL0 1709 aa21.84■■□□□ 1.09
HDAC8-209ENST00000373589 CCER2I3L3R5 266 aa21.83■■□□□ 1.09
HDAC8-209ENST00000373589 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.09
HDAC8-209ENST00000373589 CENPBP07199 599 aaPredicted RBP21.83■■□□□ 1.08
HDAC8-209ENST00000373589 ADGRF5Q8IZF2 1346 aa21.81■■□□□ 1.08
HDAC8-209ENST00000373589 PREX1Q8TCU6 1659 aa21.81■■□□□ 1.08
HDAC8-209ENST00000373589 RPGRIP1LQ68CZ1 1315 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms