RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
CSMD2-205ENST00000373381 NOP58Q9Y2X3 529 aaKnown RBP11.22□□□□□ -0.61
CSMD2-205ENST00000373381 CPLX2Q6PUV4 134 aaKnown RBP11.21□□□□□ -0.61
CSMD2-205ENST00000373381 EPS15P42566 896 aa11.21□□□□□ -0.62
CSMD2-205ENST00000373381 TRIM29Q14134 588 aa11.21□□□□□ -0.62
CSMD2-205ENST00000373381 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.62
CSMD2-205ENST00000373381 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
CSMD2-205ENST00000373381 MYO6Q9UM54 1294 aa11.2□□□□□ -0.62
CSMD2-205ENST00000373381 ST18O60284 1047 aa11.2□□□□□ -0.62
CSMD2-205ENST00000373381 GOLGA6L19H0YKK7 550 aa11.2□□□□□ -0.62
CSMD2-205ENST00000373381 FAM184AQ8NB25 1140 aa11.2□□□□□ -0.62
CSMD2-205ENST00000373381 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
CSMD2-205ENST00000373381 RBM33Q96EV2 1170 aaKnown RBP11.19□□□□□ -0.62
CSMD2-205ENST00000373381 AMPHP49418 695 aa11.19□□□□□ -0.62
CSMD2-205ENST00000373381 NGDNQ8NEJ9 315 aaKnown RBP11.19□□□□□ -0.62
CSMD2-205ENST00000373381 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
CSMD2-205ENST00000373381 ARID3AQ99856 593 aa11.18□□□□□ -0.62
CSMD2-205ENST00000373381 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
CSMD2-205ENST00000373381 TCERG1O14776 1098 aaKnown RBP11.18□□□□□ -0.62
CSMD2-205ENST00000373381 ZFYVE27Q5T4F4 411 aa11.18□□□□□ -0.62
CSMD2-205ENST00000373381 C1orf141Q5JVX7 400 aa11.18□□□□□ -0.62
CSMD2-205ENST00000373381 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-205ENST00000373381 CCDC173Q0VFZ6 552 aa11.17□□□□□ -0.62
CSMD2-205ENST00000373381 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
CSMD2-205ENST00000373381 AK7Q96M32 723 aa11.17□□□□□ -0.62
CSMD2-205ENST00000373381 NAP1L1P55209 391 aaKnown RBP11.17□□□□□ -0.62
CSMD2-205ENST00000373381 ATP6V1DQ9Y5K8 247 aa11.17□□□□□ -0.62
CSMD2-205ENST00000373381 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
CSMD2-205ENST00000373381 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSMD2-205ENST00000373381 RUFY1Q96T51 708 aa11.16□□□□□ -0.62
CSMD2-205ENST00000373381 DCTN1Q14203 1278 aa11.16□□□□□ -0.62
CSMD2-205ENST00000373381 TERF2IPQ9NYB0 399 aa11.16□□□□□ -0.62
CSMD2-205ENST00000373381 BECN2A8MW95 431 aa11.16□□□□□ -0.62
CSMD2-205ENST00000373381 ERICH2A1L162 156 aa11.16□□□□□ -0.62
CSMD2-205ENST00000373381 TEX35Q5T0J7 233 aa11.15□□□□□ -0.62
CSMD2-205ENST00000373381 CCDC97Q96F63 343 aaPredicted RBP11.15□□□□□ -0.62
CSMD2-205ENST00000373381 SF3B2Q13435 895 aaKnown RBP11.15□□□□□ -0.62
CSMD2-205ENST00000373381 SLC4A10Q6U841 1118 aa11.15□□□□□ -0.62
CSMD2-205ENST00000373381 ZCCHC6Q5VYS8 1495 aaKnown RBP11.15□□□□□ -0.62
CSMD2-205ENST00000373381 SENP3-EIF4A1A0A087X0R7 540 aa11.15□□□□□ -0.62
CSMD2-205ENST00000373381 TTC5Q8N0Z6 440 aa11.15□□□□□ -0.62
CSMD2-205ENST00000373381 PPM1FP49593 454 aaPredicted RBP11.15□□□□□ -0.62
CSMD2-205ENST00000373381 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-205ENST00000373381 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
CSMD2-205ENST00000373381 SYTL4Q96C24 671 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-205ENST00000373381 CCNB3Q8WWL7 1395 aa11.14□□□□□ -0.63
CSMD2-205ENST00000373381 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
CSMD2-205ENST00000373381 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
CSMD2-205ENST00000373381 GGT6Q6P531 493 aa11.13□□□□□ -0.63
CSMD2-205ENST00000373381 TRDNQ13061 729 aa11.13□□□□□ -0.63
CSMD2-205ENST00000373381 CPLX1O14810 134 aa11.13□□□□□ -0.63
CSMD2-205ENST00000373381 CCDC191Q8NCU4 936 aa11.13□□□□□ -0.63
CSMD2-205ENST00000373381 APPP05067 770 aa11.12□□□□□ -0.63
CSMD2-205ENST00000373381 TRIM21P19474 475 aaKnown RBP11.12□□□□□ -0.63
CSMD2-205ENST00000373381 BRMS1Q9HCU9 246 aa11.12□□□□□ -0.63
CSMD2-205ENST00000373381 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
CSMD2-205ENST00000373381 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
CSMD2-205ENST00000373381 ACBD3Q9H3P7 528 aa11.12□□□□□ -0.63
CSMD2-205ENST00000373381 OFD1O75665 1012 aa11.11□□□□□ -0.63
CSMD2-205ENST00000373381 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
CSMD2-205ENST00000373381 MAP7D2Q96T17 732 aa11.11□□□□□ -0.63
CSMD2-205ENST00000373381 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
CSMD2-205ENST00000373381 CCDC180Q9P1Z9 1646 aa11.11□□□□□ -0.63
CSMD2-205ENST00000373381 KTN1Q86UP2 1357 aaKnown RBP11.11□□□□□ -0.63
CSMD2-205ENST00000373381 B4GALNT3Q6L9W6 998 aa11.11□□□□□ -0.63
CSMD2-205ENST00000373381 DESP17661 470 aa11.1□□□□□ -0.63
CSMD2-205ENST00000373381 IKQ13123 557 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-205ENST00000373381 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
CSMD2-205ENST00000373381 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
CSMD2-205ENST00000373381 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
CSMD2-205ENST00000373381 RUFY2Q8WXA3 655 aa11.09□□□□□ -0.63
CSMD2-205ENST00000373381 DIAPH3Q9NSV4 1193 aa11.08□□□□□ -0.64
CSMD2-205ENST00000373381 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
CSMD2-205ENST00000373381 EZRP15311 586 aaKnown RBP11.08□□□□□ -0.64
CSMD2-205ENST00000373381 PPP1R1BQ9UD71 204 aaPredicted RBP11.08□□□□□ -0.64
CSMD2-205ENST00000373381 GOLGA6L3A6NEY3 463 aa11.07□□□□□ -0.64
CSMD2-205ENST00000373381 SYCP1Q15431 976 aa11.07□□□□□ -0.64
CSMD2-205ENST00000373381 MFAP1P55081 439 aaKnown RBP11.07□□□□□ -0.64
CSMD2-205ENST00000373381 WDHD1O75717 1129 aaPredicted RBP11.07□□□□□ -0.64
CSMD2-205ENST00000373381 NEBLO76041 1014 aa11.06□□□□□ -0.64
CSMD2-205ENST00000373381 DNAI2Q9GZS0 605 aa11.06□□□□□ -0.64
CSMD2-205ENST00000373381 C9orf78Q9NZ63 289 aaPredicted RBP11.06□□□□□ -0.64
CSMD2-205ENST00000373381 NOM1Q5C9Z4 860 aaKnown RBP11.06□□□□□ -0.64
CSMD2-205ENST00000373381 TMEM87AQ8NBN3 555 aa11.06□□□□□ -0.64
CSMD2-205ENST00000373381 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
CSMD2-205ENST00000373381 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
CSMD2-205ENST00000373381 SEPT11Q9NVA2 429 aaKnown RBP11.05□□□□□ -0.64
CSMD2-205ENST00000373381 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
CSMD2-205ENST00000373381 HSP90AB4PQ58FF6 505 aa11.05□□□□□ -0.64
CSMD2-205ENST00000373381 XBP1P17861 261 aa11.04□□□□□ -0.64
CSMD2-205ENST00000373381 EIF4G1Q04637 1599 aaKnown RBP11.04□□□□□ -0.64
CSMD2-205ENST00000373381 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
CSMD2-205ENST00000373381 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
CSMD2-205ENST00000373381 SEPT7Q16181 437 aaKnown RBP11.03□□□□□ -0.64
CSMD2-205ENST00000373381 DDX11L8A8MPP1 907 aa11.03□□□□□ -0.64
CSMD2-205ENST00000373381 TEFQ10587 303 aa11.03□□□□□ -0.64
CSMD2-205ENST00000373381 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
CSMD2-205ENST00000373381 RILPL2Q969X0 211 aa11.03□□□□□ -0.64
CSMD2-205ENST00000373381 HSP90B2PQ58FF3 399 aa11.02□□□□□ -0.64
CSMD2-205ENST00000373381 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms