RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 FRAT2O75474 233 aaPredicted RBP12.35□□□□□ -0.43
TRERF1-204ENST00000372922 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
TRERF1-204ENST00000372922 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
TRERF1-204ENST00000372922 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.43
TRERF1-204ENST00000372922 PRM3Q9NNZ6 103 aa12.33□□□□□ -0.44
TRERF1-204ENST00000372922 CCDC88BA6NC98 1476 aa12.33□□□□□ -0.44
TRERF1-204ENST00000372922 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
TRERF1-204ENST00000372922 RASSF8Q8NHQ8 419 aa12.32□□□□□ -0.44
TRERF1-204ENST00000372922 USP35Q9P2H5 1018 aa12.32□□□□□ -0.44
TRERF1-204ENST00000372922 NUTM2DQ5VT03 806 aaPredicted RBP12.32□□□□□ -0.44
TRERF1-204ENST00000372922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRERF1-204ENST00000372922 EVA1CP58658 441 aa12.31□□□□□ -0.44
TRERF1-204ENST00000372922 SETQ01105 290 aaPredicted RBP12.31□□□□□ -0.44
TRERF1-204ENST00000372922 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
TRERF1-204ENST00000372922 UACAQ9BZF9 1416 aa12.3□□□□□ -0.44
TRERF1-204ENST00000372922 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
TRERF1-204ENST00000372922 TCERG1O14776 1098 aaKnown RBP12.29□□□□□ -0.44
TRERF1-204ENST00000372922 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
TRERF1-204ENST00000372922 KIF3AQ9Y496 699 aa12.29□□□□□ -0.44
TRERF1-204ENST00000372922 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
TRERF1-204ENST00000372922 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
TRERF1-204ENST00000372922 MARCH6O60337 910 aa12.29□□□□□ -0.44
TRERF1-204ENST00000372922 ABCC8Q09428 1581 aa12.29□□□□□ -0.44
TRERF1-204ENST00000372922 CENPJQ9HC77 1338 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-204ENST00000372922 ZNF771Q7L3S4 317 aaPredicted RBP12.28□□□□□ -0.44
TRERF1-204ENST00000372922 PHLDB1Q86UU1 1377 aa12.28□□□□□ -0.44
TRERF1-204ENST00000372922 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
TRERF1-204ENST00000372922 NUTM2FA1L443 756 aa12.27□□□□□ -0.44
TRERF1-204ENST00000372922 VPS53Q5VIR6 699 aa12.27□□□□□ -0.44
TRERF1-204ENST00000372922 KLHL34Q8N239 644 aa12.27□□□□□ -0.44
TRERF1-204ENST00000372922 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.45
TRERF1-204ENST00000372922 TRAK1Q9UPV9 953 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 NLRP13Q86W25 1043 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 COG3Q96JB2 828 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 KIF16BQ96L93 1317 aa12.26□□□□□ -0.45
TRERF1-204ENST00000372922 PDE3BQ13370 1112 aa12.25□□□□□ -0.45
TRERF1-204ENST00000372922 CEP89Q96ST8 783 aa12.25□□□□□ -0.45
TRERF1-204ENST00000372922 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
TRERF1-204ENST00000372922 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
TRERF1-204ENST00000372922 ST18O60284 1047 aa12.24□□□□□ -0.45
TRERF1-204ENST00000372922 MSH5O43196 834 aa12.24□□□□□ -0.45
TRERF1-204ENST00000372922 GOLGA6L1Q8N7Z2 621 aa12.24□□□□□ -0.45
TRERF1-204ENST00000372922 LRRFIP1Q32MZ4 808 aaKnown RBP12.23□□□□□ -0.45
TRERF1-204ENST00000372922 NOL10Q9BSC4 688 aaKnown RBP12.23□□□□□ -0.45
TRERF1-204ENST00000372922 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
TRERF1-204ENST00000372922 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 CREBRFQ8IUR6 639 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
TRERF1-204ENST00000372922 SF3A1Q15459 793 aaKnown RBP12.23□□□□□ -0.45
TRERF1-204ENST00000372922 CLUAP1Q96AJ1 413 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 GZF1Q9H116 711 aaPredicted RBP12.23□□□□□ -0.45
TRERF1-204ENST00000372922 KIF15Q9NS87 1388 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
TRERF1-204ENST00000372922 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 PHF14O94880 888 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 TTC5Q8N0Z6 440 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 TRIM34Q9BYJ4 488 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 AKAP17AQ02040 695 aaKnown RBP12.22□□□□□ -0.45
TRERF1-204ENST00000372922 MEX3CQ5U5Q3 659 aaKnown RBP12.22□□□□□ -0.45
TRERF1-204ENST00000372922 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 TEFQ10587 303 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
TRERF1-204ENST00000372922 NEXNQ0ZGT2 675 aa12.21□□□□□ -0.45
TRERF1-204ENST00000372922 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
TRERF1-204ENST00000372922 NOL8Q76FK4 1167 aaKnown RBP12.2□□□□□ -0.46
TRERF1-204ENST00000372922 TPM3P06753 285 aa12.2□□□□□ -0.46
TRERF1-204ENST00000372922 CTDP1Q9Y5B0 961 aaPredicted RBP12.2□□□□□ -0.46
TRERF1-204ENST00000372922 H3BQV1 296 aa12.2□□□□□ -0.46
TRERF1-204ENST00000372922 IFFO2Q5TF58 517 aa12.2□□□□□ -0.46
TRERF1-204ENST00000372922 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
TRERF1-204ENST00000372922 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
TRERF1-204ENST00000372922 TCEAL9Q9UHQ7 104 aa12.18□□□□□ -0.46
TRERF1-204ENST00000372922 TPD52L1Q16890 204 aaPredicted RBP12.18□□□□□ -0.46
TRERF1-204ENST00000372922 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
TRERF1-204ENST00000372922 PDE4CQ08493 712 aa12.18□□□□□ -0.46
TRERF1-204ENST00000372922 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
TRERF1-204ENST00000372922 RILPL2Q969X0 211 aa12.18□□□□□ -0.46
TRERF1-204ENST00000372922 RBM19Q9Y4C8 960 aaKnown RBP12.17□□□□□ -0.46
TRERF1-204ENST00000372922 TPM2P07951 284 aa12.17□□□□□ -0.46
TRERF1-204ENST00000372922 PSME1Q06323 249 aa12.17□□□□□ -0.46
TRERF1-204ENST00000372922 PANK3Q9H999 370 aa12.17□□□□□ -0.46
TRERF1-204ENST00000372922 PTPRGP23470 1445 aa12.17□□□□□ -0.46
TRERF1-204ENST00000372922 GOLGA6L3A6NEY3 463 aa12.17□□□□□ -0.46
TRERF1-204ENST00000372922 MAPK8IP2Q13387 824 aaPredicted RBP12.17□□□□□ -0.46
TRERF1-204ENST00000372922 TSR1Q2NL82 804 aaKnown RBP12.17□□□□□ -0.46
TRERF1-204ENST00000372922 CYB5RLQ6IPT4 315 aa12.16□□□□□ -0.46
TRERF1-204ENST00000372922 RRP7AQ9Y3A4 280 aaKnown RBP12.16□□□□□ -0.46
TRERF1-204ENST00000372922 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRERF1-204ENST00000372922 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
TRERF1-204ENST00000372922 PES1O00541 588 aaKnown RBP12.15□□□□□ -0.46
TRERF1-204ENST00000372922 CPLX2Q6PUV4 134 aaKnown RBP12.15□□□□□ -0.46
TRERF1-204ENST00000372922 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
TRERF1-204ENST00000372922 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
TRERF1-204ENST00000372922 VPS37DQ86XT2 251 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms