RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
SNX21-203ENST00000372541 DUOX2Q9NRD8 1548 aa22.96■■□□□ 1.27
SNX21-203ENST00000372541 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
SNX21-203ENST00000372541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.95■■□□□ 1.26
SNX21-203ENST00000372541 CNTLNQ9NXG0 1405 aa22.94■■□□□ 1.26
SNX21-203ENST00000372541 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
SNX21-203ENST00000372541 GGT6Q6P531 493 aa22.94■■□□□ 1.26
SNX21-203ENST00000372541 CHIC2Q9UKJ5 165 aa22.94■■□□□ 1.26
SNX21-203ENST00000372541 ADGRL2O95490 1459 aa22.93■■□□□ 1.26
SNX21-203ENST00000372541 KIF3BO15066 747 aa22.93■■□□□ 1.26
SNX21-203ENST00000372541 C3P01024 1663 aa22.93■■□□□ 1.26
SNX21-203ENST00000372541 EIF2AK4Q9P2K8 1649 aaKnown RBP22.93■■□□□ 1.26
SNX21-203ENST00000372541 LTBP4Q8N2S1 1624 aa22.92■■□□□ 1.26
SNX21-203ENST00000372541 ERBINQ96RT1 1412 aa22.91■■□□□ 1.26
SNX21-203ENST00000372541 RRP7BPQ9NSQ0 103 aa22.91■■□□□ 1.26
SNX21-203ENST00000372541 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
SNX21-203ENST00000372541 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
SNX21-203ENST00000372541 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
SNX21-203ENST00000372541 FAM135AQ9P2D6 1515 aa22.87■■□□□ 1.25
SNX21-203ENST00000372541 IQSEC2Q5JU85 1478 aa22.87■■□□□ 1.25
SNX21-203ENST00000372541 PTPRKQ15262 1439 aa22.87■■□□□ 1.25
SNX21-203ENST00000372541 MROH2AA6NES4 1674 aa22.87■■□□□ 1.25
SNX21-203ENST00000372541 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
SNX21-203ENST00000372541 KDM5DQ9BY66 1539 aa22.86■■□□□ 1.25
SNX21-203ENST00000372541 ITGAEP38570 1179 aa22.85■■□□□ 1.25
SNX21-203ENST00000372541 NPATQ14207 1427 aa22.83■■□□□ 1.25
SNX21-203ENST00000372541 ROCK1Q13464 1354 aa22.83■■□□□ 1.25
SNX21-203ENST00000372541 ZMYM3Q14202 1370 aa22.82■■□□□ 1.24
SNX21-203ENST00000372541 MROH1Q8NDA8 1641 aa22.8■■□□□ 1.24
SNX21-203ENST00000372541 PRDM15P57071 1507 aaPredicted RBP22.8■■□□□ 1.24
SNX21-203ENST00000372541 SPATA31D1Q6ZQQ2 1576 aa22.8■■□□□ 1.24
SNX21-203ENST00000372541 WASHC2CQ9Y4E1 1318 aa22.8■■□□□ 1.24
SNX21-203ENST00000372541 ANKRD50Q9ULJ7 1429 aa22.79■■□□□ 1.24
SNX21-203ENST00000372541 ZC3H13Q5T200 1668 aaKnown RBP22.78■■□□□ 1.24
SNX21-203ENST00000372541 CAMSAP1Q5T5Y3 1602 aa22.78■■□□□ 1.24
SNX21-203ENST00000372541 DEPDC5O75140 1603 aa22.77■■□□□ 1.24
SNX21-203ENST00000372541 NCKAP5LQ9HCH0 1330 aa22.77■■□□□ 1.24
SNX21-203ENST00000372541 ABCC3O15438 1527 aa22.77■■□□□ 1.24
SNX21-203ENST00000372541 ZNF335Q9H4Z2 1342 aaPredicted RBP22.74■■□□□ 1.23
SNX21-203ENST00000372541 PKD2Q13563 968 aa22.73■■□□□ 1.23
SNX21-203ENST00000372541 KANK1Q14678 1352 aa22.73■■□□□ 1.23
SNX21-203ENST00000372541 PZPP20742 1482 aa22.72■■□□□ 1.23
SNX21-203ENST00000372541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.233e-6■■□□□ 11.7
SNX21-203ENST00000372541 PLA2R1Q13018 1463 aa22.7■■□□□ 1.22
SNX21-203ENST00000372541 CEP152O94986 1710 aa22.7■■□□□ 1.22
SNX21-203ENST00000372541 UBAP1LF5GYI3 381 aa22.69■■□□□ 1.22
SNX21-203ENST00000372541 VWDEQ8N2E2 1590 aa22.67■■□□□ 1.22
SNX21-203ENST00000372541 UNC13BO14795 1591 aa22.66■■□□□ 1.22
SNX21-203ENST00000372541 LMTK2Q8IWU2 1503 aa22.65■■□□□ 1.22
SNX21-203ENST00000372541 GCC2Q8IWJ2 1684 aa22.64■■□□□ 1.21
SNX21-203ENST00000372541 MYO3AQ8NEV4 1616 aa22.64■■□□□ 1.21
SNX21-203ENST00000372541 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
SNX21-203ENST00000372541 NAIPQ13075 1403 aa22.63■■□□□ 1.21
SNX21-203ENST00000372541 FBXO31Q5XUX0 539 aaPredicted RBP22.62■■□□□ 1.21
SNX21-203ENST00000372541 ARHGAP31Q2M1Z3 1444 aa22.62■■□□□ 1.21
SNX21-203ENST00000372541 CEP170BQ9Y4F5 1589 aaPredicted RBP22.62■■□□□ 1.21
SNX21-203ENST00000372541 TNRQ92752 1358 aa22.62■■□□□ 1.21
SNX21-203ENST00000372541 ZNF142P52746 1687 aaPredicted RBP22.62■■□□□ 1.21
SNX21-203ENST00000372541 EFCAB6Q5THR3 1501 aa22.6■■□□□ 1.21
SNX21-203ENST00000372541 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
SNX21-203ENST00000372541 IQGAP3Q86VI3 1631 aa22.56■■□□□ 1.2
SNX21-203ENST00000372541 TET3O43151 1660 aa22.55■■□□□ 1.2
SNX21-203ENST00000372541 A2ML1A8K2U0 1454 aa22.55■■□□□ 1.2
SNX21-203ENST00000372541 NUP155O75694 1391 aa22.55■■□□□ 1.2
SNX21-203ENST00000372541 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
SNX21-203ENST00000372541 RPRD2Q5VT52 1461 aaKnown RBP22.52■■□□□ 1.2
SNX21-203ENST00000372541 HSPA1LP34931 641 aa22.5■■□□□ 1.19
SNX21-203ENST00000372541 TOM1O60784 492 aa22.47■■□□□ 1.19
SNX21-203ENST00000372541 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
SNX21-203ENST00000372541 NOS1P29475 1434 aa22.46■■□□□ 1.19
SNX21-203ENST00000372541 PIP4K2BP78356 416 aa22.45■■□□□ 1.18
SNX21-203ENST00000372541 CPS1P31327 1500 aa22.45■■□□□ 1.18
SNX21-203ENST00000372541 E9PCH4 1651 aa22.45■■□□□ 1.18
SNX21-203ENST00000372541 SYNMO15061 1565 aa22.44■■□□□ 1.18
SNX21-203ENST00000372541 CFAP65Q6ZU64 1925 aaKnown RBP22.43■■□□□ 1.18
SNX21-203ENST00000372541 NEURL4Q96JN8 1562 aa22.43■■□□□ 1.18
SNX21-203ENST00000372541 SCAF1Q9H7N4 1312 aaKnown RBP22.43■■□□□ 1.18
SNX21-203ENST00000372541 ANKLE2Q86XL3 938 aa22.43■■□□□ 1.18
SNX21-203ENST00000372541 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
SNX21-203ENST00000372541 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
SNX21-203ENST00000372541 THEMISQ8N1K5 641 aaPredicted RBP22.41■■□□□ 1.18
SNX21-203ENST00000372541 PIK3C2BO00750 1634 aa22.39■■□□□ 1.17
SNX21-203ENST00000372541 MED1Q15648 1581 aaPredicted RBP22.38■■□□□ 1.17
SNX21-203ENST00000372541 UBR1Q8IWV7 1749 aa22.37■■□□□ 1.17
SNX21-203ENST00000372541 SLC52A1Q9NWF4 448 aa22.37■■□□□ 1.17
SNX21-203ENST00000372541 MED14O60244 1454 aa22.36■■□□□ 1.17
SNX21-203ENST00000372541 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
SNX21-203ENST00000372541 POLR1AO95602 1720 aaPredicted RBP22.35■■□□□ 1.17
SNX21-203ENST00000372541 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
SNX21-203ENST00000372541 ADGRB3O60242 1522 aa22.35■■□□□ 1.17
SNX21-203ENST00000372541 NPHP4O75161 1426 aaPredicted RBP22.34■■□□□ 1.17
SNX21-203ENST00000372541 IDI1Q13907 227 aa22.34■■□□□ 1.17
SNX21-203ENST00000372541 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
SNX21-203ENST00000372541 RAB3GAP2Q9H2M9 1393 aa22.34■■□□□ 1.17
SNX21-203ENST00000372541 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.17
SNX21-203ENST00000372541 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
SNX21-203ENST00000372541 SPHKAPQ2M3C7 1700 aa22.31■■□□□ 1.16
SNX21-203ENST00000372541 SLIT1O75093 1534 aa22.3■■□□□ 1.16
SNX21-203ENST00000372541 ARHGAP23Q9P227 1491 aa22.28■■□□□ 1.16
SNX21-203ENST00000372541 TRPM2O94759 1503 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms