RNA–Protein interactions for RNA: ENST00000372271.3

FAM78A-203, Transcript of family with sequence similarity 78 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78A, Length 3,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-203ENST00000372271 PTPRGP23470 1445 aa17.51■□□□□ 0.39
FAM78A-203ENST00000372271 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
FAM78A-203ENST00000372271 RSPH4AQ5TD94 716 aa17.5■□□□□ 0.39
FAM78A-203ENST00000372271 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
FAM78A-203ENST00000372271 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
FAM78A-203ENST00000372271 NUP153P49790 1475 aaKnown RBP17.49■□□□□ 0.39
FAM78A-203ENST00000372271 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
FAM78A-203ENST00000372271 SLC4A3P48751 1232 aa17.47■□□□□ 0.39
FAM78A-203ENST00000372271 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
FAM78A-203ENST00000372271 WDR62O43379 1518 aa17.46■□□□□ 0.39
FAM78A-203ENST00000372271 GOLGA2Q08379 1002 aa17.46■□□□□ 0.38
FAM78A-203ENST00000372271 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
FAM78A-203ENST00000372271 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
FAM78A-203ENST00000372271 TEX14Q8IWB6 1497 aa17.45■□□□□ 0.38
FAM78A-203ENST00000372271 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
FAM78A-203ENST00000372271 EFCAB2Q5VUJ9 269 aa17.45■□□□□ 0.38
FAM78A-203ENST00000372271 DHX29Q7Z478 1369 aaKnown RBP17.44■□□□□ 0.38
FAM78A-203ENST00000372271 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
FAM78A-203ENST00000372271 ARXQ96QS3 562 aa17.43■□□□□ 0.38
FAM78A-203ENST00000372271 DENND4BO75064 1496 aaPredicted RBP17.41■□□□□ 0.38
FAM78A-203ENST00000372271 PZPP20742 1482 aa17.41■□□□□ 0.38
FAM78A-203ENST00000372271 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
FAM78A-203ENST00000372271 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
FAM78A-203ENST00000372271 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
FAM78A-203ENST00000372271 GCC2Q8IWJ2 1684 aa17.39■□□□□ 0.37
FAM78A-203ENST00000372271 APAF1O14727 1248 aa17.38■□□□□ 0.37
FAM78A-203ENST00000372271 KIF3BO15066 747 aa17.38■□□□□ 0.37
FAM78A-203ENST00000372271 KDM5BQ9UGL1 1544 aa17.38■□□□□ 0.37
FAM78A-203ENST00000372271 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
FAM78A-203ENST00000372271 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
FAM78A-203ENST00000372271 RAPGEF6Q8TEU7 1601 aa17.37■□□□□ 0.37
FAM78A-203ENST00000372271 MS4A1P11836 297 aa17.37■□□□□ 0.37
FAM78A-203ENST00000372271 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
FAM78A-203ENST00000372271 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
FAM78A-203ENST00000372271 BACH2Q9BYV9 841 aa17.35■□□□□ 0.37
FAM78A-203ENST00000372271 DISP1Q96F81 1524 aa17.35■□□□□ 0.37
FAM78A-203ENST00000372271 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
FAM78A-203ENST00000372271 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
FAM78A-203ENST00000372271 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
FAM78A-203ENST00000372271 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.37
FAM78A-203ENST00000372271 KIAA0556O60303 1618 aa17.33■□□□□ 0.37
FAM78A-203ENST00000372271 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
FAM78A-203ENST00000372271 PPP2R1AP30153 589 aa17.33■□□□□ 0.36
FAM78A-203ENST00000372271 SAFB2Q14151 953 aaKnown RBP eCLIP17.32■□□□□ 0.36
FAM78A-203ENST00000372271 CENPQQ7L2Z9 268 aaPredicted RBP17.32■□□□□ 0.36
FAM78A-203ENST00000372271 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
FAM78A-203ENST00000372271 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
FAM78A-203ENST00000372271 KANK1Q14678 1352 aa17.31■□□□□ 0.36
FAM78A-203ENST00000372271 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
FAM78A-203ENST00000372271 ARHGAP5Q13017 1502 aa17.31■□□□□ 0.36
FAM78A-203ENST00000372271 CFAP53Q96M91 514 aa17.3■□□□□ 0.36
FAM78A-203ENST00000372271 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
FAM78A-203ENST00000372271 CLUAP1Q96AJ1 413 aa17.3■□□□□ 0.36
FAM78A-203ENST00000372271 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
FAM78A-203ENST00000372271 GGT6Q6P531 493 aa17.3■□□□□ 0.36
FAM78A-203ENST00000372271 BECN1Q14457 450 aa17.29■□□□□ 0.36
FAM78A-203ENST00000372271 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
FAM78A-203ENST00000372271 FAM161AQ3B820 660 aa17.29■□□□□ 0.36
FAM78A-203ENST00000372271 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
FAM78A-203ENST00000372271 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
FAM78A-203ENST00000372271 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
FAM78A-203ENST00000372271 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
FAM78A-203ENST00000372271 DISP3Q9P2K9 1392 aa17.28■□□□□ 0.36
FAM78A-203ENST00000372271 FTSJ3Q8IY81 847 aaKnown RBP17.28■□□□□ 0.36
FAM78A-203ENST00000372271 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
FAM78A-203ENST00000372271 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
FAM78A-203ENST00000372271 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
FAM78A-203ENST00000372271 SLKQ9H2G2 1235 aaPredicted RBP17.27■□□□□ 0.35
FAM78A-203ENST00000372271 ATP10BO94823 1461 aa17.26■□□□□ 0.35
FAM78A-203ENST00000372271 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
FAM78A-203ENST00000372271 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
FAM78A-203ENST00000372271 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
FAM78A-203ENST00000372271 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
FAM78A-203ENST00000372271 EIF3AQ14152 1382 aaKnown RBP17.25■□□□□ 0.35
FAM78A-203ENST00000372271 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
FAM78A-203ENST00000372271 KIF14Q15058 1648 aa17.25■□□□□ 0.35
FAM78A-203ENST00000372271 USP35Q9P2H5 1018 aa17.24■□□□□ 0.35
FAM78A-203ENST00000372271 BCAR3O75815 825 aa17.24■□□□□ 0.35
FAM78A-203ENST00000372271 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
FAM78A-203ENST00000372271 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
FAM78A-203ENST00000372271 U2AF1L5P0DN76 240 aaPredicted RBP17.23■□□□□ 0.35
FAM78A-203ENST00000372271 U2AF1Q01081 240 aaKnown RBP eCLIP17.23■□□□□ 0.35
FAM78A-203ENST00000372271 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
FAM78A-203ENST00000372271 E9PSI1 815 aa17.22■□□□□ 0.35
FAM78A-203ENST00000372271 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
FAM78A-203ENST00000372271 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.35
FAM78A-203ENST00000372271 TESK2Q96S53 571 aa17.21■□□□□ 0.35
FAM78A-203ENST00000372271 STK26Q9P289 416 aa17.21■□□□□ 0.35
FAM78A-203ENST00000372271 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.34
FAM78A-203ENST00000372271 PANK1Q8TE04 598 aa17.21■□□□□ 0.34
FAM78A-203ENST00000372271 PLEKHH2Q8IVE3 1493 aa17.2■□□□□ 0.34
FAM78A-203ENST00000372271 HSP90AA1P07900 732 aaKnown RBP17.2■□□□□ 0.34
FAM78A-203ENST00000372271 NFKBIBQ15653 356 aa17.19■□□□□ 0.34
FAM78A-203ENST00000372271 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
FAM78A-203ENST00000372271 IL27Q8NEV9 243 aa17.19■□□□□ 0.34
FAM78A-203ENST00000372271 UHRF1BP1Q6BDS2 1440 aa17.19■□□□□ 0.34
FAM78A-203ENST00000372271 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
FAM78A-203ENST00000372271 GSE1Q14687 1217 aa17.17■□□□□ 0.34
FAM78A-203ENST00000372271 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
FAM78A-203ENST00000372271 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms