RNA–Protein interactions for RNA: ENST00000371655.3

RAB3B-201, Transcript of RAB3B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3B, Length 12,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3B-201ENST00000371655 WASHC2AQ641Q2 1341 aa8.21□□□□□ -1.1
RAB3B-201ENST00000371655 DAPK1P53355 1430 aa8.21□□□□□ -1.1
RAB3B-201ENST00000371655 NAIPQ13075 1403 aa8.21□□□□□ -1.1
RAB3B-201ENST00000371655 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.21□□□□□ -1.1
RAB3B-201ENST00000371655 THOC2Q8NI27 1593 aaKnown RBP8.21□□□□□ -1.1
RAB3B-201ENST00000371655 CFAP44Q96MT7 982 aa8.2□□□□□ -1.1
RAB3B-201ENST00000371655 CGNL1Q0VF96 1302 aa8.2□□□□□ -1.1
RAB3B-201ENST00000371655 SAFB2Q14151 953 aaKnown RBP eCLIP8.2□□□□□ -1.1
RAB3B-201ENST00000371655 CYB5RLQ6IPT4 315 aa8.2□□□□□ -1.1
RAB3B-201ENST00000371655 PANK3Q9H999 370 aa8.2□□□□□ -1.1
RAB3B-201ENST00000371655 CASC1Q6TDU7 716 aa8.2□□□□□ -1.1
RAB3B-201ENST00000371655 PCF11O94913 1555 aaKnown RBP8.2□□□□□ -1.1
RAB3B-201ENST00000371655 FRAT1Q92837 279 aaPredicted RBP8.19□□□□□ -1.1
RAB3B-201ENST00000371655 KIF7Q2M1P5 1343 aa8.19□□□□□ -1.1
RAB3B-201ENST00000371655 CENPJQ9HC77 1338 aaPredicted RBP8.19□□□□□ -1.1
RAB3B-201ENST00000371655 CNTLNQ9NXG0 1405 aa8.19□□□□□ -1.1
RAB3B-201ENST00000371655 ZBTB7CA1YPR0 619 aa8.19□□□□□ -1.1
RAB3B-201ENST00000371655 FAM69CQ0P6D2 419 aa8.18□□□□□ -1.1
RAB3B-201ENST00000371655 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
RAB3B-201ENST00000371655 RPGRIP1LQ68CZ1 1315 aa8.18□□□□□ -1.1
RAB3B-201ENST00000371655 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
RAB3B-201ENST00000371655 GOLGA2Q08379 1002 aa8.17□□□□□ -1.1
RAB3B-201ENST00000371655 RTF1Q92541 710 aaKnown RBP8.17□□□□□ -1.1
RAB3B-201ENST00000371655 GOLGA6L22H0YM25 854 aa8.17□□□□□ -1.1
RAB3B-201ENST00000371655 SCAPERQ9BY12 1400 aa8.17□□□□□ -1.1
RAB3B-201ENST00000371655 AFAP1Q8N556 730 aa8.17□□□□□ -1.1
RAB3B-201ENST00000371655 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
RAB3B-201ENST00000371655 SLC52A1Q9NWF4 448 aa8.16□□□□□ -1.1
RAB3B-201ENST00000371655 DNAJC5BQ9UF47 199 aa8.16□□□□□ -1.1
RAB3B-201ENST00000371655 LAS1LQ9Y4W2 734 aaKnown RBP8.15□□□□□ -1.1
RAB3B-201ENST00000371655 B4GALNT3Q6L9W6 998 aa8.15□□□□□ -1.1
RAB3B-201ENST00000371655 TCERG1O14776 1098 aaKnown RBP8.15□□□□□ -1.1
RAB3B-201ENST00000371655 HDAC5Q9UQL6 1122 aa8.15□□□□□ -1.11
RAB3B-201ENST00000371655 ANKRD30BQ9BXX2 1392 aa8.15□□□□□ -1.11
RAB3B-201ENST00000371655 CDK13Q14004 1512 aaKnown RBP8.14□□□□□ -1.11
RAB3B-201ENST00000371655 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
RAB3B-201ENST00000371655 BRD4O60885 1362 aaPredicted RBP8.14□□□□□ -1.11
RAB3B-201ENST00000371655 CAMSAP2Q08AD1 1489 aa8.14□□□□□ -1.11
RAB3B-201ENST00000371655 PTPN23Q9H3S7 1636 aa8.13□□□□□ -1.11
RAB3B-201ENST00000371655 ZNF608Q9ULD9 1512 aaPredicted RBP8.13□□□□□ -1.11
RAB3B-201ENST00000371655 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
RAB3B-201ENST00000371655 COG3Q96JB2 828 aa8.13□□□□□ -1.11
RAB3B-201ENST00000371655 RGS3P49796 1198 aa8.13□□□□□ -1.11
RAB3B-201ENST00000371655 ABCC5O15440 1437 aa8.12□□□□□ -1.11
RAB3B-201ENST00000371655 E9PSI1 815 aa8.12□□□□□ -1.11
RAB3B-201ENST00000371655 PLB1Q6P1J6 1458 aa8.12□□□□□ -1.11
RAB3B-201ENST00000371655 NUTM2DQ5VT03 806 aaPredicted RBP8.12□□□□□ -1.11
RAB3B-201ENST00000371655 STK31Q9BXU1 1019 aa8.12□□□□□ -1.11
RAB3B-201ENST00000371655 NCOA1Q15788 1441 aa8.12□□□□□ -1.11
RAB3B-201ENST00000371655 KIF14Q15058 1648 aa8.11□□□□□ -1.11
RAB3B-201ENST00000371655 NGDNQ8NEJ9 315 aaKnown RBP8.11□□□□□ -1.11
RAB3B-201ENST00000371655 AAMPQ13685 434 aa8.11□□□□□ -1.11
RAB3B-201ENST00000371655 PMFBP1Q8TBY8 1022 aa8.1□□□□□ -1.11
RAB3B-201ENST00000371655 UGGT2Q9NYU1 1516 aa8.1□□□□□ -1.11
RAB3B-201ENST00000371655 ARHGEF11O15085 1522 aa8.1□□□□□ -1.11
RAB3B-201ENST00000371655 ADAMTS12P58397 1594 aa8.1□□□□□ -1.11
RAB3B-201ENST00000371655 PLEKHG5O94827 1062 aa8.09□□□□□ -1.11
RAB3B-201ENST00000371655 A0A0G2JS52 829 aa8.09□□□□□ -1.11
RAB3B-201ENST00000371655 HMMRO75330 724 aa8.09□□□□□ -1.11
RAB3B-201ENST00000371655 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
RAB3B-201ENST00000371655 NCLP19338 710 aaKnown RBP8.09□□□□□ -1.11
RAB3B-201ENST00000371655 NBPF8Q3BBV2 869 aa8.09□□□□□ -1.11
RAB3B-201ENST00000371655 PPP6R1Q9UPN7 881 aa8.09□□□□□ -1.12
RAB3B-201ENST00000371655 MINK1Q8N4C8 1332 aaPredicted RBP8.08□□□□□ -1.12
RAB3B-201ENST00000371655 PAK3O75914 559 aaPredicted RBP8.08□□□□□ -1.12
RAB3B-201ENST00000371655 OS9Q13438 667 aaPredicted RBP8.08□□□□□ -1.12
RAB3B-201ENST00000371655 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
RAB3B-201ENST00000371655 WDR97A6NE52 1622 aa8.08□□□□□ -1.12
RAB3B-201ENST00000371655 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
RAB3B-201ENST00000371655 SOX12O15370 315 aa8.08□□□□□ -1.12
RAB3B-201ENST00000371655 MCCP23508 829 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 ITPRIPQ8IWB1 547 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 SMC4Q9NTJ3 1288 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 AMPHP49418 695 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 CD109Q6YHK3 1445 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 ADGRL1O94910 1474 aa8.07□□□□□ -1.12
RAB3B-201ENST00000371655 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
RAB3B-201ENST00000371655 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
RAB3B-201ENST00000371655 NBR1Q14596 966 aa8.06□□□□□ -1.12
RAB3B-201ENST00000371655 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
RAB3B-201ENST00000371655 HSCBQ8IWL3 235 aa8.06□□□□□ -1.12
RAB3B-201ENST00000371655 RRP1P56182 461 aaKnown RBP8.06□□□□□ -1.12
RAB3B-201ENST00000371655 CSB-PGBD3P0DP91 1061 aa8.06□□□□□ -1.12
RAB3B-201ENST00000371655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.06□□□□□ -1.12
RAB3B-201ENST00000371655 RAPGEF6Q8TEU7 1601 aa8.05□□□□□ -1.12
RAB3B-201ENST00000371655 NUP160Q12769 1436 aa8.05□□□□□ -1.12
RAB3B-201ENST00000371655 DIAPH1O60610 1272 aaKnown RBP8.05□□□□□ -1.12
RAB3B-201ENST00000371655 WDR62O43379 1518 aa8.05□□□□□ -1.12
RAB3B-201ENST00000371655 ATAD2Q6PL18 1390 aa8.05□□□□□ -1.12
RAB3B-201ENST00000371655 TCOF1Q13428 1488 aaKnown RBP8.05□□□□□ -1.12
RAB3B-201ENST00000371655 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
RAB3B-201ENST00000371655 SHANK2Q9UPX8 1470 aa8.04□□□□□ -1.12
RAB3B-201ENST00000371655 API5Q9BZZ5 524 aaKnown RBP8.04□□□□□ -1.12
RAB3B-201ENST00000371655 CENPQQ7L2Z9 268 aaPredicted RBP8.04□□□□□ -1.12
RAB3B-201ENST00000371655 RBM19Q9Y4C8 960 aaKnown RBP8.04□□□□□ -1.12
RAB3B-201ENST00000371655 PLCH2O75038 1416 aa8.04□□□□□ -1.12
RAB3B-201ENST00000371655 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
RAB3B-201ENST00000371655 KIAA0556O60303 1618 aa8.04□□□□□ -1.12
RAB3B-201ENST00000371655 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms