RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
SMARCA1-202ENST00000371122 PPRC1Q5VV67 1664 aaKnown RBP11.85□□□□□ -0.51
SMARCA1-202ENST00000371122 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
SMARCA1-202ENST00000371122 RRP7AQ9Y3A4 280 aaKnown RBP11.84□□□□□ -0.51
SMARCA1-202ENST00000371122 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
SMARCA1-202ENST00000371122 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
SMARCA1-202ENST00000371122 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
SMARCA1-202ENST00000371122 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
SMARCA1-202ENST00000371122 MORC1Q86VD1 984 aa11.83□□□□□ -0.52
SMARCA1-202ENST00000371122 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
SMARCA1-202ENST00000371122 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
SMARCA1-202ENST00000371122 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
SMARCA1-202ENST00000371122 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
SMARCA1-202ENST00000371122 ROCK2O75116 1388 aaKnown RBP11.82□□□□□ -0.52
SMARCA1-202ENST00000371122 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
SMARCA1-202ENST00000371122 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
SMARCA1-202ENST00000371122 MYH16Q9H6N6 1097 aa11.81□□□□□ -0.52
SMARCA1-202ENST00000371122 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
SMARCA1-202ENST00000371122 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMARCA1-202ENST00000371122 TRAK1Q9UPV9 953 aa11.81□□□□□ -0.52
SMARCA1-202ENST00000371122 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
SMARCA1-202ENST00000371122 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
SMARCA1-202ENST00000371122 PRKRIP1Q9H875 184 aaPredicted RBP11.8□□□□□ -0.52
SMARCA1-202ENST00000371122 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
SMARCA1-202ENST00000371122 ANP32BQ92688 251 aaKnown RBP11.79□□□□□ -0.52
SMARCA1-202ENST00000371122 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
SMARCA1-202ENST00000371122 DEKP35659 375 aaKnown RBP11.78□□□□□ -0.52
SMARCA1-202ENST00000371122 WDR7Q9Y4E6 1490 aa11.78□□□□□ -0.52
SMARCA1-202ENST00000371122 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
SMARCA1-202ENST00000371122 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
SMARCA1-202ENST00000371122 PANK3Q9H999 370 aa11.77□□□□□ -0.53
SMARCA1-202ENST00000371122 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.53
SMARCA1-202ENST00000371122 EHBP1L1Q8N3D4 1523 aa11.76□□□□□ -0.53
SMARCA1-202ENST00000371122 CCDC184Q52MB2 194 aa11.76□□□□□ -0.53
SMARCA1-202ENST00000371122 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
SMARCA1-202ENST00000371122 EXOC6Q8TAG9 804 aa11.75□□□□□ -0.53
SMARCA1-202ENST00000371122 ASXL2Q76L83 1435 aa11.75□□□□□ -0.53
SMARCA1-202ENST00000371122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCA1-202ENST00000371122 KIF14Q15058 1648 aa11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 PREX2Q70Z35 1606 aa11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 BECN1Q14457 450 aa11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
SMARCA1-202ENST00000371122 EFCAB2Q5VUJ9 269 aa11.73□□□□□ -0.53
SMARCA1-202ENST00000371122 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
SMARCA1-202ENST00000371122 CDC42BPBQ9Y5S2 1711 aa11.73□□□□□ -0.53
SMARCA1-202ENST00000371122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.539e-8■■■□□ 14.8
SMARCA1-202ENST00000371122 DDRGK1Q96HY6 314 aa11.73□□□□□ -0.53
SMARCA1-202ENST00000371122 TROQ12816 1431 aaPredicted RBP11.72□□□□□ -0.53
SMARCA1-202ENST00000371122 LRRC9Q6ZRR7 1453 aa11.72□□□□□ -0.53
SMARCA1-202ENST00000371122 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
SMARCA1-202ENST00000371122 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
SMARCA1-202ENST00000371122 SUPT6HQ7KZ85 1726 aaKnown RBP11.71□□□□□ -0.54
SMARCA1-202ENST00000371122 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
SMARCA1-202ENST00000371122 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
SMARCA1-202ENST00000371122 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
SMARCA1-202ENST00000371122 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
SMARCA1-202ENST00000371122 CFAP74Q9C0B2 1584 aa11.69□□□□□ -0.54
SMARCA1-202ENST00000371122 ITSN2Q9NZM3 1697 aa11.69□□□□□ -0.54
SMARCA1-202ENST00000371122 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
SMARCA1-202ENST00000371122 WASHC2AQ641Q2 1341 aa11.69□□□□□ -0.54
SMARCA1-202ENST00000371122 ITPRIPQ8IWB1 547 aa11.69□□□□□ -0.54
SMARCA1-202ENST00000371122 APAF1O14727 1248 aa11.68□□□□□ -0.54
SMARCA1-202ENST00000371122 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
SMARCA1-202ENST00000371122 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
SMARCA1-202ENST00000371122 CDCA7LQ96GN5 454 aa11.67□□□□□ -0.54
SMARCA1-202ENST00000371122 KIF7Q2M1P5 1343 aa11.67□□□□□ -0.54
SMARCA1-202ENST00000371122 LTV1Q96GA3 475 aaPredicted RBP11.67□□□□□ -0.54
SMARCA1-202ENST00000371122 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
SMARCA1-202ENST00000371122 NBPF8Q3BBV2 869 aa11.66□□□□□ -0.54
SMARCA1-202ENST00000371122 USP47Q96K76 1375 aa11.66□□□□□ -0.54
SMARCA1-202ENST00000371122 RALBP1Q15311 655 aa11.66□□□□□ -0.54
SMARCA1-202ENST00000371122 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
SMARCA1-202ENST00000371122 CRBNQ96SW2 442 aa11.65□□□□□ -0.54
SMARCA1-202ENST00000371122 NBPF1Q3BBV0 1214 aa11.65□□□□□ -0.54
SMARCA1-202ENST00000371122 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
SMARCA1-202ENST00000371122 MSH5O43196 834 aa11.65□□□□□ -0.55
SMARCA1-202ENST00000371122 HSP90AB1P08238 724 aaKnown RBP11.65□□□□□ -0.55
SMARCA1-202ENST00000371122 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.55
SMARCA1-202ENST00000371122 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.55
SMARCA1-202ENST00000371122 KANK1Q14678 1352 aa11.64□□□□□ -0.55
SMARCA1-202ENST00000371122 TRIM44Q96DX7 344 aaPredicted RBP11.64□□□□□ -0.55
SMARCA1-202ENST00000371122 TMEM132EQ6IEE7 984 aa11.64□□□□□ -0.55
SMARCA1-202ENST00000371122 SMC4Q9NTJ3 1288 aa11.64□□□□□ -0.55
SMARCA1-202ENST00000371122 AFAP1Q8N556 730 aa11.64□□□□□ -0.55
SMARCA1-202ENST00000371122 FRMPD1Q5SYB0 1578 aa11.64□□□□□ -0.55
SMARCA1-202ENST00000371122 OS9Q13438 667 aaPredicted RBP11.63□□□□□ -0.55
SMARCA1-202ENST00000371122 RICTORQ6R327 1708 aa11.63□□□□□ -0.55
SMARCA1-202ENST00000371122 TCOF1Q13428 1488 aaKnown RBP11.63□□□□□ -0.55
SMARCA1-202ENST00000371122 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
SMARCA1-202ENST00000371122 MINK1Q8N4C8 1332 aaPredicted RBP11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 NOL8Q76FK4 1167 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 SKAP1Q86WV1 359 aa11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 NAP1L2Q9ULW6 460 aaPredicted RBP11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
SMARCA1-202ENST00000371122 GPATCH8Q9UKJ3 1502 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms