RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 PTMSP20962 102 aa9.66□□□□□ -0.86
COL21A1-203ENST00000370819 USP47Q96K76 1375 aa9.65□□□□□ -0.86
COL21A1-203ENST00000370819 APAF1O14727 1248 aa9.65□□□□□ -0.86
COL21A1-203ENST00000370819 PHLDB1Q86UU1 1377 aa9.65□□□□□ -0.86
COL21A1-203ENST00000370819 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.87
COL21A1-203ENST00000370819 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.87
COL21A1-203ENST00000370819 KIF3BO15066 747 aa9.64□□□□□ -0.87
COL21A1-203ENST00000370819 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
COL21A1-203ENST00000370819 ELL2O00472 640 aaPredicted RBP9.64□□□□□ -0.87
COL21A1-203ENST00000370819 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
COL21A1-203ENST00000370819 DNAJC5BQ9UF47 199 aa9.64□□□□□ -0.87
COL21A1-203ENST00000370819 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
COL21A1-203ENST00000370819 HSP90AA2PQ14568 343 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-203ENST00000370819 TRIM6-TRIM34B2RNG4 842 aa9.63□□□□□ -0.87
COL21A1-203ENST00000370819 SLC4A10Q6U841 1118 aa9.63□□□□□ -0.87
COL21A1-203ENST00000370819 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-203ENST00000370819 SYAP1Q96A49 352 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-203ENST00000370819 TRAK1Q9UPV9 953 aa9.63□□□□□ -0.87
COL21A1-203ENST00000370819 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
COL21A1-203ENST00000370819 KIF7Q2M1P5 1343 aa9.62□□□□□ -0.87
COL21A1-203ENST00000370819 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
COL21A1-203ENST00000370819 CGNL1Q0VF96 1302 aa9.62□□□□□ -0.87
COL21A1-203ENST00000370819 RSPH6AQ9H0K4 717 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 E9PSI1 815 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 CARMIL2Q6F5E8 1435 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 WASHC2AQ641Q2 1341 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 CCDC7Q96M83 1385 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
COL21A1-203ENST00000370819 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-203ENST00000370819 ANKRD45Q5TZF3 282 aa9.6□□□□□ -0.87
COL21A1-203ENST00000370819 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-203ENST00000370819 NFKBIBQ15653 356 aa9.6□□□□□ -0.87
COL21A1-203ENST00000370819 STK31Q9BXU1 1019 aa9.6□□□□□ -0.87
COL21A1-203ENST00000370819 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
COL21A1-203ENST00000370819 TERF2IPQ9NYB0 399 aa9.6□□□□□ -0.87
COL21A1-203ENST00000370819 EIF3AQ14152 1382 aaKnown RBP9.59□□□□□ -0.87
COL21A1-203ENST00000370819 HMMRO75330 724 aa9.59□□□□□ -0.87
COL21A1-203ENST00000370819 ST18O60284 1047 aa9.59□□□□□ -0.87
COL21A1-203ENST00000370819 ZKSCAN2Q63HK3 967 aa9.59□□□□□ -0.87
COL21A1-203ENST00000370819 UBE2Q2Q8WVN8 375 aa9.58□□□□□ -0.88
COL21A1-203ENST00000370819 CCDC144AA2RUR9 1427 aa9.58□□□□□ -0.88
COL21A1-203ENST00000370819 A0A0U1RQG5 324 aaPredicted RBP9.58□□□□□ -0.88
COL21A1-203ENST00000370819 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL21A1-203ENST00000370819 CFTRP13569 1480 aa9.57□□□□□ -0.88
COL21A1-203ENST00000370819 CDCA7LQ96GN5 454 aa9.57□□□□□ -0.88
COL21A1-203ENST00000370819 GNL2Q13823 731 aaKnown RBP9.57□□□□□ -0.88
COL21A1-203ENST00000370819 SPAG9O60271 1321 aaKnown RBP9.57□□□□□ -0.88
COL21A1-203ENST00000370819 LAMC3Q9Y6N6 1575 aa9.56□□□□□ -0.88
COL21A1-203ENST00000370819 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
COL21A1-203ENST00000370819 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
COL21A1-203ENST00000370819 CHMP5Q9NZZ3 219 aa9.56□□□□□ -0.88
COL21A1-203ENST00000370819 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
COL21A1-203ENST00000370819 ZNF644Q9H582 1327 aaPredicted RBP9.55□□□□□ -0.88
COL21A1-203ENST00000370819 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
COL21A1-203ENST00000370819 CNTLNQ9NXG0 1405 aa9.55□□□□□ -0.88
COL21A1-203ENST00000370819 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
COL21A1-203ENST00000370819 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
COL21A1-203ENST00000370819 BRPF3Q9ULD4 1205 aa9.55□□□□□ -0.88
COL21A1-203ENST00000370819 HTATSF1O43719 755 aaKnown RBP9.54□□□□□ -0.88
COL21A1-203ENST00000370819 PKNOX2Q96KN3 472 aa9.54□□□□□ -0.88
COL21A1-203ENST00000370819 PANK1Q8TE04 598 aa9.54□□□□□ -0.88
COL21A1-203ENST00000370819 RILPL2Q969X0 211 aa9.54□□□□□ -0.88
COL21A1-203ENST00000370819 SKOR2Q2VWA4 1001 aaPredicted RBP9.54□□□□□ -0.88
COL21A1-203ENST00000370819 CCDC184Q52MB2 194 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 DZIP1LQ8IYY4 767 aaKnown RBP9.53□□□□□ -0.88
COL21A1-203ENST00000370819 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
COL21A1-203ENST00000370819 UACAQ9BZF9 1416 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 NPHP1O15259 732 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 LMOD3Q0VAK6 560 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 LNPKQ9C0E8 428 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 FGD6Q6ZV73 1430 aa9.53□□□□□ -0.88
COL21A1-203ENST00000370819 FRAT2O75474 233 aaPredicted RBP9.52□□□□□ -0.88
COL21A1-203ENST00000370819 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.88
COL21A1-203ENST00000370819 IGF1RP08069 1367 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 PHF14O94880 888 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 WASHC2CQ9Y4E1 1318 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 HSP90B1P14625 803 aaKnown RBP9.52□□□□□ -0.89
COL21A1-203ENST00000370819 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
COL21A1-203ENST00000370819 DDX19BQ9UMR2 479 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 KIF21BO75037 1637 aa9.52□□□□□ -0.89
COL21A1-203ENST00000370819 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
COL21A1-203ENST00000370819 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
COL21A1-203ENST00000370819 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
COL21A1-203ENST00000370819 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
COL21A1-203ENST00000370819 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
COL21A1-203ENST00000370819 GPATCH3Q96I76 525 aa9.5□□□□□ -0.89
COL21A1-203ENST00000370819 GORABQ5T7V8 394 aa9.5□□□□□ -0.89
COL21A1-203ENST00000370819 AMPHP49418 695 aa9.49□□□□□ -0.89
COL21A1-203ENST00000370819 RIPK4P57078 832 aa9.49□□□□□ -0.89
COL21A1-203ENST00000370819 FAM43AQ8N2R8 423 aa9.49□□□□□ -0.89
COL21A1-203ENST00000370819 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
COL21A1-203ENST00000370819 TNNT3P45378 269 aaPredicted RBP9.48□□□□□ -0.89
COL21A1-203ENST00000370819 NGDNQ8NEJ9 315 aaKnown RBP9.48□□□□□ -0.89
COL21A1-203ENST00000370819 CHMP4AQ9BY43 222 aa9.48□□□□□ -0.89
COL21A1-203ENST00000370819 BACH2Q9BYV9 841 aa9.48□□□□□ -0.89
COL21A1-203ENST00000370819 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms