RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
GPC3-201ENST00000370818 CCER2I3L3R5 266 aa17.86■□□□□ 0.45
GPC3-201ENST00000370818 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
GPC3-201ENST00000370818 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
GPC3-201ENST00000370818 CCDC144AA2RUR9 1427 aa17.84■□□□□ 0.45
GPC3-201ENST00000370818 ADGRL1O94910 1474 aa17.83■□□□□ 0.44
GPC3-201ENST00000370818 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
GPC3-201ENST00000370818 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
GPC3-201ENST00000370818 PRKCSHP14314 528 aaPredicted RBP17.82■□□□□ 0.44
GPC3-201ENST00000370818 SCAPERQ9BY12 1400 aa17.82■□□□□ 0.44
GPC3-201ENST00000370818 USP47Q96K76 1375 aa17.81■□□□□ 0.44
GPC3-201ENST00000370818 DCAF11Q8TEB1 546 aa17.81■□□□□ 0.44
GPC3-201ENST00000370818 INO80Q9ULG1 1556 aaPredicted RBP17.81■□□□□ 0.44
GPC3-201ENST00000370818 ATP10AO60312 1499 aa17.8■□□□□ 0.44
GPC3-201ENST00000370818 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
GPC3-201ENST00000370818 KIF7Q2M1P5 1343 aa17.8■□□□□ 0.44
GPC3-201ENST00000370818 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
GPC3-201ENST00000370818 ATP7AQ04656 1500 aa17.8■□□□□ 0.44
GPC3-201ENST00000370818 KDM5CP41229 1560 aa17.78■□□□□ 0.44
GPC3-201ENST00000370818 POLR1AO95602 1720 aaPredicted RBP17.75■□□□□ 0.43
GPC3-201ENST00000370818 DEPDC5O75140 1603 aa17.75■□□□□ 0.43
GPC3-201ENST00000370818 CARD11Q9BXL7 1154 aa17.75■□□□□ 0.43
GPC3-201ENST00000370818 RGL3Q3MIN7 710 aa17.74■□□□□ 0.43
GPC3-201ENST00000370818 A2MP01023 1474 aa17.74■□□□□ 0.43
GPC3-201ENST00000370818 BCORL1Q5H9F3 1711 aa17.74■□□□□ 0.43
GPC3-201ENST00000370818 CD109Q6YHK3 1445 aa17.74■□□□□ 0.43
GPC3-201ENST00000370818 PRAG1Q86YV5 1406 aa17.74■□□□□ 0.43
GPC3-201ENST00000370818 DHX29Q7Z478 1369 aaKnown RBP17.72■□□□□ 0.43
GPC3-201ENST00000370818 E9PCH4 1651 aa17.71■□□□□ 0.43
GPC3-201ENST00000370818 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
GPC3-201ENST00000370818 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
GPC3-201ENST00000370818 KIF3BO15066 747 aa17.7■□□□□ 0.42
GPC3-201ENST00000370818 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
GPC3-201ENST00000370818 ROCK2O75116 1388 aaKnown RBP17.7■□□□□ 0.42
GPC3-201ENST00000370818 KIDINS220Q9ULH0 1771 aa17.69■□□□□ 0.42
GPC3-201ENST00000370818 TRPM1Q7Z4N2 1603 aa17.68■□□□□ 0.42
GPC3-201ENST00000370818 RBM19Q9Y4C8 960 aaKnown RBP17.68■□□□□ 0.42
GPC3-201ENST00000370818 PTPRTO14522 1441 aa17.68■□□□□ 0.42
GPC3-201ENST00000370818 ARID4BQ4LE39 1312 aaPredicted RBP17.68■□□□□ 0.42
GPC3-201ENST00000370818 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
GPC3-201ENST00000370818 EIF2AK4Q9P2K8 1649 aaKnown RBP17.68■□□□□ 0.42
GPC3-201ENST00000370818 ST20-MTHFSA0A0A6YYL1 179 aa17.67■□□□□ 0.42
GPC3-201ENST00000370818 MROH1Q8NDA8 1641 aa17.67■□□□□ 0.42
GPC3-201ENST00000370818 POGZQ7Z3K3 1410 aa17.67■□□□□ 0.42
GPC3-201ENST00000370818 TRPM2O94759 1503 aa17.66■□□□□ 0.42
GPC3-201ENST00000370818 PRDM15P57071 1507 aaPredicted RBP17.66■□□□□ 0.42
GPC3-201ENST00000370818 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
GPC3-201ENST00000370818 TET3O43151 1660 aa17.66■□□□□ 0.42
GPC3-201ENST00000370818 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
GPC3-201ENST00000370818 CFAP74Q9C0B2 1584 aa17.66■□□□□ 0.42
GPC3-201ENST00000370818 KANK1Q14678 1352 aa17.65■□□□□ 0.42
GPC3-201ENST00000370818 BCANQ96GW7 911 aa17.63■□□□□ 0.41
GPC3-201ENST00000370818 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
GPC3-201ENST00000370818 CCDC184Q52MB2 194 aa17.62■□□□□ 0.41
GPC3-201ENST00000370818 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
GPC3-201ENST00000370818 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
GPC3-201ENST00000370818 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
GPC3-201ENST00000370818 NEO1Q92859 1461 aa17.6■□□□□ 0.41
GPC3-201ENST00000370818 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
GPC3-201ENST00000370818 FRMPD1Q5SYB0 1578 aa17.59■□□□□ 0.41
GPC3-201ENST00000370818 LAMC1P11047 1609 aa17.58■□□□□ 0.41
GPC3-201ENST00000370818 HECW2Q9P2P5 1572 aa17.58■□□□□ 0.4
GPC3-201ENST00000370818 CEP152O94986 1710 aa17.57■□□□□ 0.4
GPC3-201ENST00000370818 FKBP8Q14318 412 aa17.57■□□□□ 0.4
GPC3-201ENST00000370818 EFCAB6Q5THR3 1501 aa17.57■□□□□ 0.4
GPC3-201ENST00000370818 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
GPC3-201ENST00000370818 MSH5O43196 834 aa17.57■□□□□ 0.4
GPC3-201ENST00000370818 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
GPC3-201ENST00000370818 LMTK2Q8IWU2 1503 aa17.56■□□□□ 0.4
GPC3-201ENST00000370818 PPRC1Q5VV67 1664 aaKnown RBP17.54■□□□□ 0.4
GPC3-201ENST00000370818 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
GPC3-201ENST00000370818 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
GPC3-201ENST00000370818 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
GPC3-201ENST00000370818 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
GPC3-201ENST00000370818 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
GPC3-201ENST00000370818 MAP3K4Q9Y6R4 1608 aa17.54■□□□□ 0.4
GPC3-201ENST00000370818 TESK2Q96S53 571 aa17.53■□□□□ 0.4
GPC3-201ENST00000370818 UGGT1Q9NYU2 1555 aa17.53■□□□□ 0.4
GPC3-201ENST00000370818 MRS2Q9HD23 443 aa17.53■□□□□ 0.4
GPC3-201ENST00000370818 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.4
GPC3-201ENST00000370818 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.398e-7■■□□□ 12.1
GPC3-201ENST00000370818 STAC3Q96MF2 364 aa17.52■□□□□ 0.39
GPC3-201ENST00000370818 GLI2P10070 1586 aa17.5■□□□□ 0.39
GPC3-201ENST00000370818 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
GPC3-201ENST00000370818 GGT6Q6P531 493 aa17.49■□□□□ 0.39
GPC3-201ENST00000370818 DISP3Q9P2K9 1392 aa17.49■□□□□ 0.39
GPC3-201ENST00000370818 NPATQ14207 1427 aa17.49■□□□□ 0.39
GPC3-201ENST00000370818 DIP2CQ9Y2E4 1556 aa17.48■□□□□ 0.39
GPC3-201ENST00000370818 RICTORQ6R327 1708 aa17.48■□□□□ 0.39
GPC3-201ENST00000370818 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
GPC3-201ENST00000370818 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
GPC3-201ENST00000370818 ABCC3O15438 1527 aa17.45■□□□□ 0.38
GPC3-201ENST00000370818 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
GPC3-201ENST00000370818 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
GPC3-201ENST00000370818 YEATS2Q9ULM3 1422 aa17.44■□□□□ 0.38
GPC3-201ENST00000370818 MYOM2P54296 1465 aa17.44■□□□□ 0.38
GPC3-201ENST00000370818 IQGAP1P46940 1657 aa17.44■□□□□ 0.38
GPC3-201ENST00000370818 FAM69CQ0P6D2 419 aa17.43■□□□□ 0.38
GPC3-201ENST00000370818 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
GPC3-201ENST00000370818 TMF1P82094 1093 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms