RNA–Protein interactions for RNA: ENST00000370214.8

ABCD3-202, Transcript of ATP binding cassette subfamily D member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD3, Length 3,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-202ENST00000370214 MIA2Q96PC5 1412 aa9.7□□□□□ -0.86
ABCD3-202ENST00000370214 KTN1Q86UP2 1357 aaKnown RBP9.7□□□□□ -0.86
ABCD3-202ENST00000370214 PZPP20742 1482 aa9.7□□□□□ -0.86
ABCD3-202ENST00000370214 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
ABCD3-202ENST00000370214 APAF1O14727 1248 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 PLPPR3Q6T4P5 718 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 TROQ12816 1431 aaPredicted RBP9.69□□□□□ -0.86
ABCD3-202ENST00000370214 KIF3BO15066 747 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 TMEM132EQ6IEE7 984 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 GGT6Q6P531 493 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 DISP3Q9P2K9 1392 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 C9orf84Q5VXU9 1444 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 TEX14Q8IWB6 1497 aa9.69□□□□□ -0.86
ABCD3-202ENST00000370214 DISP1Q96F81 1524 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 BCAR3O75815 825 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 TMF1P82094 1093 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 HECW1Q76N89 1606 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 PTPRGP23470 1445 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 SPATA31E1Q6ZUB1 1445 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 TRAK1Q9UPV9 953 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
ABCD3-202ENST00000370214 CCDC144AA2RUR9 1427 aa9.67□□□□□ -0.86
ABCD3-202ENST00000370214 RALBP1Q15311 655 aa9.66□□□□□ -0.86
ABCD3-202ENST00000370214 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
ABCD3-202ENST00000370214 STK26Q9P289 416 aa9.66□□□□□ -0.86
ABCD3-202ENST00000370214 TARBP1Q13395 1621 aaKnown RBP9.66□□□□□ -0.86
ABCD3-202ENST00000370214 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
ABCD3-202ENST00000370214 KIF14Q15058 1648 aa9.66□□□□□ -0.86
ABCD3-202ENST00000370214 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.86
ABCD3-202ENST00000370214 WDR62O43379 1518 aa9.65□□□□□ -0.86
ABCD3-202ENST00000370214 MRC2Q9UBG0 1479 aa9.65□□□□□ -0.86
ABCD3-202ENST00000370214 PPM1GO15355 546 aaPredicted RBP9.65□□□□□ -0.86
ABCD3-202ENST00000370214 DMRT2Q9Y5R5 561 aa9.65□□□□□ -0.86
ABCD3-202ENST00000370214 KIAA0586Q9BVV6 1533 aa9.65□□□□□ -0.86
ABCD3-202ENST00000370214 GRIN2AQ12879 1464 aa9.65□□□□□ -0.87
ABCD3-202ENST00000370214 TCOF1Q13428 1488 aaKnown RBP9.64□□□□□ -0.87
ABCD3-202ENST00000370214 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
ABCD3-202ENST00000370214 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
ABCD3-202ENST00000370214 ROCK1Q13464 1354 aa9.63□□□□□ -0.87
ABCD3-202ENST00000370214 PANK1Q8TE04 598 aa9.63□□□□□ -0.87
ABCD3-202ENST00000370214 TNNQ9UQP3 1299 aa9.63□□□□□ -0.87
ABCD3-202ENST00000370214 COG6Q9Y2V7 657 aa9.63□□□□□ -0.87
ABCD3-202ENST00000370214 ATP10BO94823 1461 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 PBRM1Q86U86 1689 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 TESK2Q96S53 571 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 FBLN1P23142 703 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 ERICH6BQ5W0A0 696 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 SLKQ9H2G2 1235 aaPredicted RBP9.62□□□□□ -0.87
ABCD3-202ENST00000370214 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
ABCD3-202ENST00000370214 TCERG1O14776 1098 aaKnown RBP9.61□□□□□ -0.87
ABCD3-202ENST00000370214 PLEKHG5O94827 1062 aa9.61□□□□□ -0.87
ABCD3-202ENST00000370214 SLC12A5Q9H2X9 1139 aa9.61□□□□□ -0.87
ABCD3-202ENST00000370214 GCC2Q8IWJ2 1684 aa9.6□□□□□ -0.87
ABCD3-202ENST00000370214 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
ABCD3-202ENST00000370214 GOLGA2Q08379 1002 aa9.59□□□□□ -0.87
ABCD3-202ENST00000370214 SPAG9O60271 1321 aaKnown RBP9.59□□□□□ -0.87
ABCD3-202ENST00000370214 ADAMTS12P58397 1594 aa9.59□□□□□ -0.87
ABCD3-202ENST00000370214 MAGI1Q96QZ7 1491 aaPredicted RBP9.59□□□□□ -0.87
ABCD3-202ENST00000370214 BACH2Q9BYV9 841 aa9.59□□□□□ -0.88
ABCD3-202ENST00000370214 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
ABCD3-202ENST00000370214 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
ABCD3-202ENST00000370214 BRD4O60885 1362 aaPredicted RBP9.58□□□□□ -0.88
ABCD3-202ENST00000370214 KIAA0556O60303 1618 aa9.58□□□□□ -0.88
ABCD3-202ENST00000370214 BRPF3Q9ULD4 1205 aa9.57□□□□□ -0.88
ABCD3-202ENST00000370214 RAPGEF6Q8TEU7 1601 aa9.57□□□□□ -0.88
ABCD3-202ENST00000370214 PLEKHH1Q9ULM0 1364 aa9.57□□□□□ -0.88
ABCD3-202ENST00000370214 ADGRF5Q8IZF2 1346 aa9.57□□□□□ -0.88
ABCD3-202ENST00000370214 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
ABCD3-202ENST00000370214 SOX12O15370 315 aa9.56□□□□□ -0.88
ABCD3-202ENST00000370214 MORC1Q86VD1 984 aa9.56□□□□□ -0.88
ABCD3-202ENST00000370214 ELL2O00472 640 aaPredicted RBP9.56□□□□□ -0.88
ABCD3-202ENST00000370214 MLECQ14165 292 aa9.56□□□□□ -0.88
ABCD3-202ENST00000370214 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
ABCD3-202ENST00000370214 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
ABCD3-202ENST00000370214 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
ABCD3-202ENST00000370214 IGHDP01880 384 aa9.55□□□□□ -0.88
ABCD3-202ENST00000370214 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
ABCD3-202ENST00000370214 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■□□□ 11.8
ABCD3-202ENST00000370214 DUSP27Q5VZP5 1158 aa9.55□□□□□ -0.88
ABCD3-202ENST00000370214 CABP2Q9NPB3 220 aa9.55□□□□□ -0.88
ABCD3-202ENST00000370214 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
ABCD3-202ENST00000370214 SEC24BO95487 1268 aa9.54□□□□□ -0.88
ABCD3-202ENST00000370214 TSR2Q969E8 191 aaKnown RBP9.54□□□□□ -0.88
ABCD3-202ENST00000370214 FRAT2O75474 233 aaPredicted RBP9.54□□□□□ -0.88
ABCD3-202ENST00000370214 CARD14Q9BXL6 1004 aa9.54□□□□□ -0.88
ABCD3-202ENST00000370214 ERBINQ96RT1 1412 aa9.54□□□□□ -0.88
ABCD3-202ENST00000370214 GZF1Q9H116 711 aaPredicted RBP9.53□□□□□ -0.88
ABCD3-202ENST00000370214 CEP170Q5SW79 1584 aa9.53□□□□□ -0.88
ABCD3-202ENST00000370214 GGNBP2Q9H3C7 697 aa9.53□□□□□ -0.88
ABCD3-202ENST00000370214 AMER1Q5JTC6 1135 aaPredicted RBP9.52□□□□□ -0.88
ABCD3-202ENST00000370214 EIF4G3O43432 1585 aaKnown RBP9.52□□□□□ -0.89
ABCD3-202ENST00000370214 SCAPERQ9BY12 1400 aa9.52□□□□□ -0.89
ABCD3-202ENST00000370214 MTHFSP49914 203 aa9.52□□□□□ -0.89
ABCD3-202ENST00000370214 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
ABCD3-202ENST00000370214 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
ABCD3-202ENST00000370214 SYNJ2O15056 1496 aa9.51□□□□□ -0.89
ABCD3-202ENST00000370214 RAPGEF3O95398 923 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms