RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 PPP1R3GB7ZBB8 358 aa9.06□□□□□ -0.96
LRRC39-203ENST00000370138 E2F4Q16254 413 aa9.06□□□□□ -0.96
LRRC39-203ENST00000370138 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
LRRC39-203ENST00000370138 PDIA6Q15084 440 aa9.05□□□□□ -0.96
LRRC39-203ENST00000370138 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
LRRC39-203ENST00000370138 EPAS1Q99814 870 aa9.04□□□□□ -0.96
LRRC39-203ENST00000370138 C6orf132Q5T0Z8 1188 aa9.03□□□□□ -0.96
LRRC39-203ENST00000370138 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
LRRC39-203ENST00000370138 WDR70Q9NW82 654 aa9.02□□□□□ -0.96
LRRC39-203ENST00000370138 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
LRRC39-203ENST00000370138 TSHZ2Q9NRE2 1034 aa9.02□□□□□ -0.97
LRRC39-203ENST00000370138 NBR1Q14596 966 aa9.01□□□□□ -0.97
LRRC39-203ENST00000370138 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
LRRC39-203ENST00000370138 PTPN5P54829 565 aa9□□□□□ -0.97
LRRC39-203ENST00000370138 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
LRRC39-203ENST00000370138 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
LRRC39-203ENST00000370138 TSR1Q2NL82 804 aaKnown RBP8.99□□□□□ -0.97
LRRC39-203ENST00000370138 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
LRRC39-203ENST00000370138 NBPF3Q9H094 633 aa8.99□□□□□ -0.97
LRRC39-203ENST00000370138 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
LRRC39-203ENST00000370138 EN1Q05925 392 aaPredicted RBP8.98□□□□□ -0.97
LRRC39-203ENST00000370138 WNT2BQ93097 391 aa8.98□□□□□ -0.97
LRRC39-203ENST00000370138 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
LRRC39-203ENST00000370138 KIAA1468Q9P260 1216 aa8.97□□□□□ -0.97
LRRC39-203ENST00000370138 MAP3K7O43318 606 aa8.96□□□□□ -0.97
LRRC39-203ENST00000370138 RGS20O76081 388 aa8.96□□□□□ -0.97
LRRC39-203ENST00000370138 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
LRRC39-203ENST00000370138 TRIM6-TRIM34B2RNG4 842 aa8.94□□□□□ -0.98
LRRC39-203ENST00000370138 SEPT9Q9UHD8 586 aaPredicted RBP8.94□□□□□ -0.98
LRRC39-203ENST00000370138 ONECUT3O60422 494 aaPredicted RBP8.92□□□□□ -0.98
LRRC39-203ENST00000370138 OSBPP22059 807 aa8.92□□□□□ -0.98
LRRC39-203ENST00000370138 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
LRRC39-203ENST00000370138 BCAMP50895 628 aa8.9□□□□□ -0.98
LRRC39-203ENST00000370138 LAPTM4BQ86VI4 370 aa8.9□□□□□ -0.98
LRRC39-203ENST00000370138 ZFRQ96KR1 1074 aaKnown RBP8.9□□□□□ -0.98
LRRC39-203ENST00000370138 ANKK1Q8NFD2 765 aa8.89□□□□□ -0.99
LRRC39-203ENST00000370138 CDHR5Q9HBB8 845 aa8.89□□□□□ -0.99
LRRC39-203ENST00000370138 FAM198AQ9UFP1 575 aa8.89□□□□□ -0.99
LRRC39-203ENST00000370138 KCNV2Q8TDN2 545 aa8.89□□□□□ -0.99
LRRC39-203ENST00000370138 SOWAHBA6NEL2 793 aa8.87□□□□□ -0.99
LRRC39-203ENST00000370138 C3orf80F5H4A9 247 aa8.87□□□□□ -0.99
LRRC39-203ENST00000370138 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
LRRC39-203ENST00000370138 PRSS12P56730 875 aa8.86□□□□□ -0.99
LRRC39-203ENST00000370138 FAM98CQ17RN3 349 aaKnown RBP8.86□□□□□ -0.99
LRRC39-203ENST00000370138 SMAPO00193 183 aa8.85□□□□□ -0.99
LRRC39-203ENST00000370138 PACS2Q86VP3 889 aa8.85□□□□□ -0.99
LRRC39-203ENST00000370138 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
LRRC39-203ENST00000370138 MLLT3P42568 568 aaPredicted RBP8.84□□□□□ -0.99
LRRC39-203ENST00000370138 WBP1LQ9NX94 342 aa8.83□□□□□ -1
LRRC39-203ENST00000370138 CERKQ8TCT0 537 aa8.83□□□□□ -1
LRRC39-203ENST00000370138 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
LRRC39-203ENST00000370138 PLCB2Q00722 1185 aa8.81□□□□□ -1
LRRC39-203ENST00000370138 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
LRRC39-203ENST00000370138 LRCH3Q96II8 777 aa8.8□□□□□ -1
LRRC39-203ENST00000370138 IFFO2Q5TF58 517 aa8.79□□□□□ -1
LRRC39-203ENST00000370138 TATDN2Q93075 761 aa8.79□□□□□ -1
LRRC39-203ENST00000370138 PNMA3Q9UL41 463 aa8.79□□□□□ -1
LRRC39-203ENST00000370138 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
LRRC39-203ENST00000370138 PADI6Q6TGC4 694 aa8.77□□□□□ -1
LRRC39-203ENST00000370138 NUDT18Q6ZVK8 323 aa8.77□□□□□ -1
LRRC39-203ENST00000370138 SAMD7Q7Z3H4 446 aa8.77□□□□□ -1
LRRC39-203ENST00000370138 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1
LRRC39-203ENST00000370138 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
LRRC39-203ENST00000370138 TTC13Q8NBP0 860 aa8.77□□□□□ -1.01
LRRC39-203ENST00000370138 RBM27Q9P2N5 1060 aaKnown RBP8.77□□□□□ -1.01
LRRC39-203ENST00000370138 ITGBL1O95965 494 aaPredicted RBP8.76□□□□□ -1.01
LRRC39-203ENST00000370138 A0A0G2JS52 829 aa8.75□□□□□ -1.01
LRRC39-203ENST00000370138 NYAP1Q6ZVC0 841 aa8.75□□□□□ -1.01
LRRC39-203ENST00000370138 SEMA3EO15041 775 aa8.74□□□□□ -1.01
LRRC39-203ENST00000370138 Q6ZNB5 142 aa8.74□□□□□ -1.01
LRRC39-203ENST00000370138 P3H3Q8IVL6 736 aa8.73□□□□□ -1.01
LRRC39-203ENST00000370138 PPP4CP60510 307 aa8.72□□□□□ -1.01
LRRC39-203ENST00000370138 PTGDRQ13258 359 aa8.71□□□□□ -1.01
LRRC39-203ENST00000370138 EYA1Q99502 592 aa8.7□□□□□ -1.02
LRRC39-203ENST00000370138 RNF40O75150 1001 aa8.69□□□□□ -1.02
LRRC39-203ENST00000370138 KCNC4Q03721 635 aa8.69□□□□□ -1.02
LRRC39-203ENST00000370138 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
LRRC39-203ENST00000370138 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
LRRC39-203ENST00000370138 HAP1P54257 671 aaPredicted RBP8.67□□□□□ -1.02
LRRC39-203ENST00000370138 FAM161AQ3B820 660 aa8.66□□□□□ -1.02
LRRC39-203ENST00000370138 APLP1P51693 650 aa8.65□□□□□ -1.02
LRRC39-203ENST00000370138 TJAP1Q5JTD0 557 aa8.65□□□□□ -1.02
LRRC39-203ENST00000370138 KDM2AQ9Y2K7 1162 aa8.65□□□□□ -1.02
LRRC39-203ENST00000370138 TESPA1A2RU30 521 aaPredicted RBP8.64□□□□□ -1.03
LRRC39-203ENST00000370138 HDGFP51858 240 aaKnown RBP8.64□□□□□ -1.03
LRRC39-203ENST00000370138 MTRQ99707 1265 aa8.64□□□□□ -1.03
LRRC39-203ENST00000370138 ADGRG1Q9Y653 693 aa8.64□□□□□ -1.03
LRRC39-203ENST00000370138 RBM26Q5T8P6 1007 aaKnown RBP8.63□□□□□ -1.03
LRRC39-203ENST00000370138 FCHSD2O94868 740 aa8.62□□□□□ -1.03
LRRC39-203ENST00000370138 SLF2Q8IX21 1173 aa8.61□□□□□ -1.03
LRRC39-203ENST00000370138 ZNF516Q92618 1163 aa8.61□□□□□ -1.03
LRRC39-203ENST00000370138 DNAJB2P25686 324 aa8.59□□□□□ -1.03
LRRC39-203ENST00000370138 RBM46Q8TBY0 533 aaKnown RBP8.59□□□□□ -1.03
LRRC39-203ENST00000370138 IL21Q9HBE4 155 aa8.59□□□□□ -1.03
LRRC39-203ENST00000370138 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
LRRC39-203ENST00000370138 TMEM134Q9H6X4 195 aa8.58□□□□□ -1.04
LRRC39-203ENST00000370138 GPR37O15354 613 aa8.57□□□□□ -1.04
LRRC39-203ENST00000370138 FECHP22830 423 aa8.57□□□□□ -1.04
LRRC39-203ENST00000370138 COPS2P61201 443 aa8.57□□□□□ -1.04
LRRC39-203ENST00000370138 NKX2-3Q8TAU0 364 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms