RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
PRPF38B-203ENST00000370025 CFAP74Q9C0B2 1584 aa13.93□□□□□ -0.18
PRPF38B-203ENST00000370025 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
PRPF38B-203ENST00000370025 ATP7AQ04656 1500 aa13.92□□□□□ -0.18
PRPF38B-203ENST00000370025 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRPF38B-203ENST00000370025 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
PRPF38B-203ENST00000370025 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
PRPF38B-203ENST00000370025 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
PRPF38B-203ENST00000370025 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
PRPF38B-203ENST00000370025 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.18
PRPF38B-203ENST00000370025 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.18
PRPF38B-203ENST00000370025 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.18
PRPF38B-203ENST00000370025 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
PRPF38B-203ENST00000370025 ZNF518AQ6AHZ1 1483 aa13.89□□□□□ -0.19
PRPF38B-203ENST00000370025 CCDC144AA2RUR9 1427 aa13.88□□□□□ -0.19
PRPF38B-203ENST00000370025 DHX29Q7Z478 1369 aaKnown RBP13.87□□□□□ -0.19
PRPF38B-203ENST00000370025 MSH5O43196 834 aa13.86□□□□□ -0.19
PRPF38B-203ENST00000370025 NEFLP07196 543 aa13.86□□□□□ -0.19
PRPF38B-203ENST00000370025 ZNF326Q5BKZ1 582 aaKnown RBP13.86□□□□□ -0.19
PRPF38B-203ENST00000370025 KANK1Q14678 1352 aa13.86□□□□□ -0.19
PRPF38B-203ENST00000370025 NEO1Q92859 1461 aa13.85□□□□□ -0.19
PRPF38B-203ENST00000370025 KIF3BO15066 747 aa13.85□□□□□ -0.19
PRPF38B-203ENST00000370025 POGZQ7Z3K3 1410 aa13.84□□□□□ -0.19
PRPF38B-203ENST00000370025 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
PRPF38B-203ENST00000370025 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.19
PRPF38B-203ENST00000370025 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 UHRF1BP1Q6BDS2 1440 aa13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 ANO8Q9HCE9 1232 aaPredicted RBP13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 DEPDC5O75140 1603 aa13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 ATP10AO60312 1499 aa13.83□□□□□ -0.2
PRPF38B-203ENST00000370025 KDM5CP41229 1560 aa13.82□□□□□ -0.2
PRPF38B-203ENST00000370025 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
PRPF38B-203ENST00000370025 MLH3Q9UHC1 1453 aa13.81□□□□□ -0.2
PRPF38B-203ENST00000370025 GLI2P10070 1586 aa13.81□□□□□ -0.2
PRPF38B-203ENST00000370025 A2MP01023 1474 aa13.8□□□□□ -0.2
PRPF38B-203ENST00000370025 MAP3K4Q9Y6R4 1608 aa13.8□□□□□ -0.2
PRPF38B-203ENST00000370025 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
PRPF38B-203ENST00000370025 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
PRPF38B-203ENST00000370025 ANP32CO43423 234 aa13.79□□□□□ -0.2
PRPF38B-203ENST00000370025 TET3O43151 1660 aa13.79□□□□□ -0.2
PRPF38B-203ENST00000370025 E9PCH4 1651 aa13.79□□□□□ -0.2
PRPF38B-203ENST00000370025 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
PRPF38B-203ENST00000370025 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
PRPF38B-203ENST00000370025 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
PRPF38B-203ENST00000370025 SPATA31E1Q6ZUB1 1445 aa13.78□□□□□ -0.2
PRPF38B-203ENST00000370025 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
PRPF38B-203ENST00000370025 PRDM15P57071 1507 aaPredicted RBP13.77□□□□□ -0.2
PRPF38B-203ENST00000370025 RAPGEF3O95398 923 aa13.77□□□□□ -0.21
PRPF38B-203ENST00000370025 NBR1Q14596 966 aa13.77□□□□□ -0.21
PRPF38B-203ENST00000370025 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.21
PRPF38B-203ENST00000370025 USP47Q96K76 1375 aa13.77□□□□□ -0.21
PRPF38B-203ENST00000370025 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
PRPF38B-203ENST00000370025 CCDC7Q96M83 1385 aa13.75□□□□□ -0.21
PRPF38B-203ENST00000370025 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
PRPF38B-203ENST00000370025 PTPRTO14522 1441 aa13.75□□□□□ -0.21
PRPF38B-203ENST00000370025 SPHKAPQ2M3C7 1700 aa13.74□□□□□ -0.21
PRPF38B-203ENST00000370025 TRPM2O94759 1503 aa13.74□□□□□ -0.21
PRPF38B-203ENST00000370025 MROH1Q8NDA8 1641 aa13.74□□□□□ -0.21
PRPF38B-203ENST00000370025 DEKP35659 375 aaKnown RBP13.74□□□□□ -0.21
PRPF38B-203ENST00000370025 DIP2BQ9P265 1576 aa13.74□□□□□ -0.21
PRPF38B-203ENST00000370025 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
PRPF38B-203ENST00000370025 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
PRPF38B-203ENST00000370025 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
PRPF38B-203ENST00000370025 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
PRPF38B-203ENST00000370025 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
PRPF38B-203ENST00000370025 GGT6Q6P531 493 aa13.72□□□□□ -0.21
PRPF38B-203ENST00000370025 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
PRPF38B-203ENST00000370025 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
PRPF38B-203ENST00000370025 CCER2I3L3R5 266 aa13.71□□□□□ -0.21
PRPF38B-203ENST00000370025 FRMPD1Q5SYB0 1578 aa13.71□□□□□ -0.21
PRPF38B-203ENST00000370025 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.22
PRPF38B-203ENST00000370025 LMTK2Q8IWU2 1503 aa13.71□□□□□ -0.22
PRPF38B-203ENST00000370025 KIF7Q2M1P5 1343 aa13.7□□□□□ -0.22
PRPF38B-203ENST00000370025 STAC3Q96MF2 364 aa13.7□□□□□ -0.22
PRPF38B-203ENST00000370025 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
PRPF38B-203ENST00000370025 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
PRPF38B-203ENST00000370025 CEP152O94986 1710 aa13.7□□□□□ -0.22
PRPF38B-203ENST00000370025 TRPM1Q7Z4N2 1603 aa13.7□□□□□ -0.22
PRPF38B-203ENST00000370025 BCORL1Q5H9F3 1711 aa13.69□□□□□ -0.22
PRPF38B-203ENST00000370025 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
PRPF38B-203ENST00000370025 CLTCL1P53675 1640 aa13.69□□□□□ -0.22
PRPF38B-203ENST00000370025 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
PRPF38B-203ENST00000370025 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
PRPF38B-203ENST00000370025 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
PRPF38B-203ENST00000370025 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
PRPF38B-203ENST00000370025 PPRC1Q5VV67 1664 aaKnown RBP13.67□□□□□ -0.22
PRPF38B-203ENST00000370025 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
PRPF38B-203ENST00000370025 GPRASP1Q5JY77 1395 aa13.66□□□□□ -0.22
PRPF38B-203ENST00000370025 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
PRPF38B-203ENST00000370025 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
PRPF38B-203ENST00000370025 YEATS2Q9ULM3 1422 aa13.65□□□□□ -0.22
PRPF38B-203ENST00000370025 NEURL4Q96JN8 1562 aa13.64□□□□□ -0.23
PRPF38B-203ENST00000370025 KIF1BO60333 1816 aa13.64□□□□□ -0.23
PRPF38B-203ENST00000370025 ZMYM4Q5VZL5 1548 aa13.64□□□□□ -0.23
PRPF38B-203ENST00000370025 LAMC1P11047 1609 aa13.64□□□□□ -0.23
PRPF38B-203ENST00000370025 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
PRPF38B-203ENST00000370025 ABCC3O15438 1527 aa13.63□□□□□ -0.23
PRPF38B-203ENST00000370025 NPATQ14207 1427 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms