RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 PTMSP20962 102 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 MRE11P49959 708 aa9.7□□□□□ -0.86
UFL1-201ENST00000369278 GRPEL1Q9HAV7 217 aa9.69□□□□□ -0.86
UFL1-201ENST00000369278 KIF7Q2M1P5 1343 aa9.69□□□□□ -0.86
UFL1-201ENST00000369278 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
UFL1-201ENST00000369278 XRCC6P12956 609 aaKnown RBP eCLIP9.68□□□□□ -0.86
UFL1-201ENST00000369278 GOLGA2Q08379 1002 aa9.68□□□□□ -0.86
UFL1-201ENST00000369278 CAVIN1Q6NZI2 390 aaKnown RBP9.68□□□□□ -0.86
UFL1-201ENST00000369278 MCTP1Q6DN14 999 aa9.68□□□□□ -0.86
UFL1-201ENST00000369278 KDM5BQ9UGL1 1544 aa9.68□□□□□ -0.86
UFL1-201ENST00000369278 RNF123Q5XPI4 1314 aa9.67□□□□□ -0.86
UFL1-201ENST00000369278 CHMP5Q9NZZ3 219 aa9.67□□□□□ -0.86
UFL1-201ENST00000369278 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
UFL1-201ENST00000369278 CGNQ9P2M7 1197 aaKnown RBP9.67□□□□□ -0.86
UFL1-201ENST00000369278 DDX11L8A8MPP1 907 aa9.67□□□□□ -0.86
UFL1-201ENST00000369278 APAF1O14727 1248 aa9.66□□□□□ -0.86
UFL1-201ENST00000369278 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.66□□□□□ -0.86
UFL1-201ENST00000369278 ERICH4A6NGS2 130 aa9.66□□□□□ -0.86
UFL1-201ENST00000369278 CHMP4BQ9H444 224 aaKnown RBP9.66□□□□□ -0.86
UFL1-201ENST00000369278 BCAR3O75815 825 aa9.65□□□□□ -0.86
UFL1-201ENST00000369278 MCM4P33991 863 aa9.65□□□□□ -0.86
UFL1-201ENST00000369278 NLRP13Q86W25 1043 aa9.65□□□□□ -0.86
UFL1-201ENST00000369278 ELL2O00472 640 aaPredicted RBP9.65□□□□□ -0.86
UFL1-201ENST00000369278 PKD2Q13563 968 aa9.65□□□□□ -0.86
UFL1-201ENST00000369278 ZBTB9Q96C00 473 aa9.64□□□□□ -0.87
UFL1-201ENST00000369278 KTN1Q86UP2 1357 aaKnown RBP9.64□□□□□ -0.87
UFL1-201ENST00000369278 PHLDB1Q86UU1 1377 aa9.64□□□□□ -0.87
UFL1-201ENST00000369278 TPM2P07951 284 aa9.64□□□□□ -0.87
UFL1-201ENST00000369278 C22orf23Q9BZE7 217 aa9.64□□□□□ -0.87
UFL1-201ENST00000369278 SKIDA1Q1XH10 827 aa9.63□□□□□ -0.87
UFL1-201ENST00000369278 LNPKQ9C0E8 428 aa9.63□□□□□ -0.87
UFL1-201ENST00000369278 RWDD1Q9H446 243 aaPredicted RBP9.63□□□□□ -0.87
UFL1-201ENST00000369278 SMG6Q86US8 1419 aaKnown RBP9.63□□□□□ -0.87
UFL1-201ENST00000369278 SAFB2Q14151 953 aaKnown RBP eCLIP9.62□□□□□ -0.87
UFL1-201ENST00000369278 CCDC7Q96M83 1385 aa9.62□□□□□ -0.87
UFL1-201ENST00000369278 CENPJQ9HC77 1338 aaPredicted RBP9.62□□□□□ -0.87
UFL1-201ENST00000369278 PDCL3Q9H2J4 239 aa9.62□□□□□ -0.87
UFL1-201ENST00000369278 PANK3Q9H999 370 aa9.61□□□□□ -0.87
UFL1-201ENST00000369278 NAP1L2Q9ULW6 460 aaPredicted RBP9.61□□□□□ -0.87
UFL1-201ENST00000369278 TSC1Q92574 1164 aa9.61□□□□□ -0.87
UFL1-201ENST00000369278 SMC4Q9NTJ3 1288 aa9.61□□□□□ -0.87
UFL1-201ENST00000369278 CNTLNQ9NXG0 1405 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 NCOA2Q15596 1464 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 GOLGA6L4A6NEF3 574 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 ANKRD45Q5TZF3 282 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 PRPF40AO75400 957 aaKnown RBP9.6□□□□□ -0.87
UFL1-201ENST00000369278 TSPY4P0CV99 314 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 TSPY10P0CW01 314 aa9.6□□□□□ -0.87
UFL1-201ENST00000369278 PNISRQ8TF01 805 aaKnown RBP9.6□□□□□ -0.87
UFL1-201ENST00000369278 MYBBP1AQ9BQG0 1328 aaKnown RBP9.59□□□□□ -0.87
UFL1-201ENST00000369278 NBPF8Q3BBV2 869 aa9.59□□□□□ -0.87
UFL1-201ENST00000369278 SPC24Q8NBT2 197 aa9.59□□□□□ -0.87
UFL1-201ENST00000369278 ZFP91Q96JP5 570 aaPredicted RBP9.59□□□□□ -0.87
UFL1-201ENST00000369278 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
UFL1-201ENST00000369278 RALBP1Q15311 655 aa9.59□□□□□ -0.87
UFL1-201ENST00000369278 PAXIP1Q6ZW49 1069 aaPredicted RBP9.59□□□□□ -0.87
UFL1-201ENST00000369278 AQRO60306 1485 aaKnown RBP eCLIP9.58□□□□□ -0.88
UFL1-201ENST00000369278 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
UFL1-201ENST00000369278 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
UFL1-201ENST00000369278 SEC24BO95487 1268 aa9.58□□□□□ -0.88
UFL1-201ENST00000369278 PDE3BQ13370 1112 aa9.58□□□□□ -0.88
UFL1-201ENST00000369278 CLCN1P35523 988 aa9.58□□□□□ -0.88
UFL1-201ENST00000369278 CCAR2Q8N163 923 aaKnown RBP9.58□□□□□ -0.88
UFL1-201ENST00000369278 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
UFL1-201ENST00000369278 ARHGAP35Q9NRY4 1499 aa9.57□□□□□ -0.88
UFL1-201ENST00000369278 PDZRN3Q9UPQ7 1066 aa9.57□□□□□ -0.88
UFL1-201ENST00000369278 FHAD1B1AJZ9 1412 aa9.57□□□□□ -0.88
UFL1-201ENST00000369278 ZRSR1Q15695 479 aaKnown RBP9.57□□□□□ -0.88
UFL1-201ENST00000369278 ZNF830Q96NB3 372 aaPredicted RBP9.57□□□□□ -0.88
UFL1-201ENST00000369278 DHX37Q8IY37 1157 aaKnown RBP9.57□□□□□ -0.88
UFL1-201ENST00000369278 PMFBP1Q8TBY8 1022 aa9.57□□□□□ -0.88
UFL1-201ENST00000369278 SOX12O15370 315 aa9.56□□□□□ -0.88
UFL1-201ENST00000369278 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
UFL1-201ENST00000369278 CFDP1Q9UEE9 299 aaPredicted RBP9.56□□□□□ -0.88
UFL1-201ENST00000369278 ZSCAN30Q86W11 494 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 TMF1P82094 1093 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 AAMPQ13685 434 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 APPP05067 770 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 KCNJ4P48050 445 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 IFT57Q9NWB7 429 aa9.55□□□□□ -0.88
UFL1-201ENST00000369278 SMARCA4P51532 1647 aa9.54□□□□□ -0.88
UFL1-201ENST00000369278 PRDM4Q9UKN5 801 aa9.54□□□□□ -0.88
UFL1-201ENST00000369278 USP47Q96K76 1375 aa9.54□□□□□ -0.88
UFL1-201ENST00000369278 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
UFL1-201ENST00000369278 ROCK2O75116 1388 aaKnown RBP9.53□□□□□ -0.88
UFL1-201ENST00000369278 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
UFL1-201ENST00000369278 MAP7D2Q96T17 732 aa9.53□□□□□ -0.88
UFL1-201ENST00000369278 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
UFL1-201ENST00000369278 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
UFL1-201ENST00000369278 SKOR2Q2VWA4 1001 aaPredicted RBP9.53□□□□□ -0.88
UFL1-201ENST00000369278 PLPPR3Q6T4P5 718 aa9.53□□□□□ -0.88
UFL1-201ENST00000369278 SYCE3A1L190 88 aa9.52□□□□□ -0.88
UFL1-201ENST00000369278 CCDC173Q0VFZ6 552 aa9.52□□□□□ -0.88
UFL1-201ENST00000369278 CERS3Q8IU89 383 aa9.52□□□□□ -0.88
UFL1-201ENST00000369278 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.88
UFL1-201ENST00000369278 TIAM1Q13009 1591 aa9.52□□□□□ -0.89
UFL1-201ENST00000369278 TRIM6-TRIM34B2RNG4 842 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms