RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 PARD3Q8TEW0 1356 aa24.29■■□□□ 1.48
PRDM1-202ENST00000369091 CUL7Q14999 1698 aa24.27■■□□□ 1.48
PRDM1-202ENST00000369091 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
PRDM1-202ENST00000369091 SEC24BO95487 1268 aa24.27■■□□□ 1.48
PRDM1-202ENST00000369091 CLCN1P35523 988 aa24.27■■□□□ 1.48
PRDM1-202ENST00000369091 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
PRDM1-202ENST00000369091 E9PCH4 1651 aa24.26■■□□□ 1.47
PRDM1-202ENST00000369091 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
PRDM1-202ENST00000369091 ABCC5O15440 1437 aa24.25■■□□□ 1.47
PRDM1-202ENST00000369091 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
PRDM1-202ENST00000369091 CC2D1BQ5T0F9 858 aaKnown RBP24.25■■□□□ 1.47
PRDM1-202ENST00000369091 GZF1Q9H116 711 aaPredicted RBP24.25■■□□□ 1.47
PRDM1-202ENST00000369091 RALGAPBQ86X10 1494 aa24.24■■□□□ 1.47
PRDM1-202ENST00000369091 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
PRDM1-202ENST00000369091 CDK13Q14004 1512 aaKnown RBP24.23■■□□□ 1.47
PRDM1-202ENST00000369091 GOLGA6L3A6NEY3 463 aa24.22■■□□□ 1.47
PRDM1-202ENST00000369091 PKD2Q13563 968 aa24.21■■□□□ 1.47
PRDM1-202ENST00000369091 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.46
PRDM1-202ENST00000369091 ERCC6Q03468 1493 aa24.2■■□□□ 1.46
PRDM1-202ENST00000369091 ZMYM4Q5VZL5 1548 aa24.19■■□□□ 1.46
PRDM1-202ENST00000369091 ANTXR1Q9H6X2 564 aa24.19■■□□□ 1.46
PRDM1-202ENST00000369091 BECN1Q14457 450 aa24.18■■□□□ 1.46
PRDM1-202ENST00000369091 FSD2A1L4K1 749 aa24.17■■□□□ 1.46
PRDM1-202ENST00000369091 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
PRDM1-202ENST00000369091 DUSP27Q5VZP5 1158 aa24.16■■□□□ 1.46
PRDM1-202ENST00000369091 UHRF1BP1Q6BDS2 1440 aa24.16■■□□□ 1.46
PRDM1-202ENST00000369091 EPRSP07814 1512 aaKnown RBP24.16■■□□□ 1.46
PRDM1-202ENST00000369091 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
PRDM1-202ENST00000369091 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
PRDM1-202ENST00000369091 PER1O15534 1290 aaPredicted RBP24.14■■□□□ 1.46
PRDM1-202ENST00000369091 SPRYD3Q8NCJ5 442 aa24.14■■□□□ 1.46
PRDM1-202ENST00000369091 PLEKHH1Q9ULM0 1364 aa24.14■■□□□ 1.46
PRDM1-202ENST00000369091 IGHDP01880 384 aa24.14■■□□□ 1.45
PRDM1-202ENST00000369091 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
PRDM1-202ENST00000369091 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
PRDM1-202ENST00000369091 PLEKHH2Q8IVE3 1493 aa24.11■■□□□ 1.45
PRDM1-202ENST00000369091 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
PRDM1-202ENST00000369091 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PRDM1-202ENST00000369091 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
PRDM1-202ENST00000369091 PLEKHG5O94827 1062 aa24.09■■□□□ 1.45
PRDM1-202ENST00000369091 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
PRDM1-202ENST00000369091 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
PRDM1-202ENST00000369091 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.45
PRDM1-202ENST00000369091 PODXL2Q9NZ53 605 aa24.08■■□□□ 1.44
PRDM1-202ENST00000369091 TBC1D2Q9BYX2 928 aa24.07■■□□□ 1.44
PRDM1-202ENST00000369091 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
PRDM1-202ENST00000369091 MCM4P33991 863 aa24.06■■□□□ 1.44
PRDM1-202ENST00000369091 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
PRDM1-202ENST00000369091 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
PRDM1-202ENST00000369091 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
PRDM1-202ENST00000369091 INSRP06213 1382 aa24.04■■□□□ 1.44
PRDM1-202ENST00000369091 ESPNB1AK53 854 aa24.04■■□□□ 1.44
PRDM1-202ENST00000369091 BCAR3O75815 825 aa24.03■■□□□ 1.44
PRDM1-202ENST00000369091 EIF3AQ14152 1382 aaKnown RBP24.02■■□□□ 1.44
PRDM1-202ENST00000369091 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
PRDM1-202ENST00000369091 GOLGA2Q08379 1002 aa24.02■■□□□ 1.44
PRDM1-202ENST00000369091 PANK3Q9H999 370 aa24.01■■□□□ 1.43
PRDM1-202ENST00000369091 TRAK2O60296 914 aa24■■□□□ 1.43
PRDM1-202ENST00000369091 MRE11P49959 708 aa23.99■■□□□ 1.43
PRDM1-202ENST00000369091 ZNF521Q96K83 1311 aa23.99■■□□□ 1.43
PRDM1-202ENST00000369091 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
PRDM1-202ENST00000369091 GRPEL1Q9HAV7 217 aa23.98■■□□□ 1.43
PRDM1-202ENST00000369091 SPINK5Q9NQ38 1064 aaPredicted RBP23.98■■□□□ 1.43
PRDM1-202ENST00000369091 ARHGEF12Q9NZN5 1544 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 DISP3Q9P2K9 1392 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 TBC1D32Q96NH3 1257 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 SLFN5Q08AF3 891 aa23.96■■□□□ 1.43
PRDM1-202ENST00000369091 MAPK8IP3Q9UPT6 1336 aa23.95■■□□□ 1.42
PRDM1-202ENST00000369091 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
PRDM1-202ENST00000369091 NBPF1Q3BBV0 1214 aa23.95■■□□□ 1.42
PRDM1-202ENST00000369091 WDR62O43379 1518 aa23.94■■□□□ 1.42
PRDM1-202ENST00000369091 CCDC146Q8IYE0 955 aa23.93■■□□□ 1.42
PRDM1-202ENST00000369091 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
PRDM1-202ENST00000369091 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
PRDM1-202ENST00000369091 CAMSAP2Q08AD1 1489 aa23.91■■□□□ 1.42
PRDM1-202ENST00000369091 NUP155O75694 1391 aa23.91■■□□□ 1.42
PRDM1-202ENST00000369091 TPM2P07951 284 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 PANK1Q8TE04 598 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 PDCL3Q9H2J4 239 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 COG6Q9Y2V7 657 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.42
PRDM1-202ENST00000369091 TRIM44Q96DX7 344 aaPredicted RBP23.89■■□□□ 1.42
PRDM1-202ENST00000369091 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
PRDM1-202ENST00000369091 PPP2R1AP30153 589 aa23.86■■□□□ 1.41
PRDM1-202ENST00000369091 KIAA1211Q6ZU35 1233 aa23.86■■□□□ 1.41
PRDM1-202ENST00000369091 CHMP5Q9NZZ3 219 aa23.86■■□□□ 1.41
PRDM1-202ENST00000369091 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 GAS2L3Q86XJ1 694 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 TESK2Q96S53 571 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 TRMT2AQ8IZ69 625 aaKnown RBP23.85■■□□□ 1.41
PRDM1-202ENST00000369091 NKTRP30414 1462 aaKnown RBP23.85■■□□□ 1.41
PRDM1-202ENST00000369091 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
PRDM1-202ENST00000369091 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
PRDM1-202ENST00000369091 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
PRDM1-202ENST00000369091 RBM10P98175 930 aaKnown RBP23.83■■□□□ 1.41
PRDM1-202ENST00000369091 PRDM4Q9UKN5 801 aa23.83■■□□□ 1.41
PRDM1-202ENST00000369091 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
PRDM1-202ENST00000369091 CENPJQ9HC77 1338 aaPredicted RBP23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms