RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 PARD3Q8TEW0 1356 aa24.29■■□□□ 1.48
PRDM1-202ENST00000369091 CUL7Q14999 1698 aa24.27■■□□□ 1.48
PRDM1-202ENST00000369091 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
PRDM1-202ENST00000369091 SEC24BO95487 1268 aa24.27■■□□□ 1.48
PRDM1-202ENST00000369091 CLCN1P35523 988 aa24.27■■□□□ 1.48
PRDM1-202ENST00000369091 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
PRDM1-202ENST00000369091 E9PCH4 1651 aa24.26■■□□□ 1.47
PRDM1-202ENST00000369091 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
PRDM1-202ENST00000369091 ABCC5O15440 1437 aa24.25■■□□□ 1.47
PRDM1-202ENST00000369091 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
PRDM1-202ENST00000369091 CC2D1BQ5T0F9 858 aaKnown RBP24.25■■□□□ 1.47
PRDM1-202ENST00000369091 GZF1Q9H116 711 aaPredicted RBP24.25■■□□□ 1.47
PRDM1-202ENST00000369091 RALGAPBQ86X10 1494 aa24.24■■□□□ 1.47
PRDM1-202ENST00000369091 KDM2AQ9Y2K7 1162 aa24.24■■□□□ 1.47
PRDM1-202ENST00000369091 CDK13Q14004 1512 aaKnown RBP24.23■■□□□ 1.47
PRDM1-202ENST00000369091 GOLGA6L3A6NEY3 463 aa24.22■■□□□ 1.47
PRDM1-202ENST00000369091 PKD2Q13563 968 aa24.21■■□□□ 1.47
PRDM1-202ENST00000369091 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.46
PRDM1-202ENST00000369091 ERCC6Q03468 1493 aa24.2■■□□□ 1.46
PRDM1-202ENST00000369091 ZMYM4Q5VZL5 1548 aa24.19■■□□□ 1.46
PRDM1-202ENST00000369091 ANTXR1Q9H6X2 564 aa24.19■■□□□ 1.46
PRDM1-202ENST00000369091 BECN1Q14457 450 aa24.18■■□□□ 1.46
PRDM1-202ENST00000369091 FSD2A1L4K1 749 aa24.17■■□□□ 1.46
PRDM1-202ENST00000369091 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
PRDM1-202ENST00000369091 DUSP27Q5VZP5 1158 aa24.16■■□□□ 1.46
PRDM1-202ENST00000369091 UHRF1BP1Q6BDS2 1440 aa24.16■■□□□ 1.46
PRDM1-202ENST00000369091 EPRSP07814 1512 aaKnown RBP24.16■■□□□ 1.46
PRDM1-202ENST00000369091 LAMC3Q9Y6N6 1575 aa24.15■■□□□ 1.46
PRDM1-202ENST00000369091 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
PRDM1-202ENST00000369091 PER1O15534 1290 aaPredicted RBP24.14■■□□□ 1.46
PRDM1-202ENST00000369091 SPRYD3Q8NCJ5 442 aa24.14■■□□□ 1.46
PRDM1-202ENST00000369091 PLEKHH1Q9ULM0 1364 aa24.14■■□□□ 1.46
PRDM1-202ENST00000369091 IGHDP01880 384 aa24.14■■□□□ 1.45
PRDM1-202ENST00000369091 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
PRDM1-202ENST00000369091 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
PRDM1-202ENST00000369091 PLEKHH2Q8IVE3 1493 aa24.11■■□□□ 1.45
PRDM1-202ENST00000369091 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
PRDM1-202ENST00000369091 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PRDM1-202ENST00000369091 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
PRDM1-202ENST00000369091 PLEKHG5O94827 1062 aa24.09■■□□□ 1.45
PRDM1-202ENST00000369091 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
PRDM1-202ENST00000369091 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.45
PRDM1-202ENST00000369091 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.45
PRDM1-202ENST00000369091 PODXL2Q9NZ53 605 aa24.08■■□□□ 1.44
PRDM1-202ENST00000369091 TBC1D2Q9BYX2 928 aa24.07■■□□□ 1.44
PRDM1-202ENST00000369091 PDS5BQ9NTI5 1447 aa24.07■■□□□ 1.44
PRDM1-202ENST00000369091 MCM4P33991 863 aa24.06■■□□□ 1.44
PRDM1-202ENST00000369091 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
PRDM1-202ENST00000369091 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
PRDM1-202ENST00000369091 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
PRDM1-202ENST00000369091 INSRP06213 1382 aa24.04■■□□□ 1.44
PRDM1-202ENST00000369091 ESPNB1AK53 854 aa24.04■■□□□ 1.44
PRDM1-202ENST00000369091 BCAR3O75815 825 aa24.03■■□□□ 1.44
PRDM1-202ENST00000369091 EIF3AQ14152 1382 aaKnown RBP24.02■■□□□ 1.44
PRDM1-202ENST00000369091 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
PRDM1-202ENST00000369091 GOLGA2Q08379 1002 aa24.02■■□□□ 1.44
PRDM1-202ENST00000369091 PANK3Q9H999 370 aa24.01■■□□□ 1.43
PRDM1-202ENST00000369091 TRAK2O60296 914 aa24■■□□□ 1.43
PRDM1-202ENST00000369091 MRE11P49959 708 aa23.99■■□□□ 1.43
PRDM1-202ENST00000369091 ZNF521Q96K83 1311 aa23.99■■□□□ 1.43
PRDM1-202ENST00000369091 MYH16Q9H6N6 1097 aa23.98■■□□□ 1.43
PRDM1-202ENST00000369091 GRPEL1Q9HAV7 217 aa23.98■■□□□ 1.43
PRDM1-202ENST00000369091 SPINK5Q9NQ38 1064 aaPredicted RBP23.98■■□□□ 1.43
PRDM1-202ENST00000369091 ARHGEF12Q9NZN5 1544 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 DISP3Q9P2K9 1392 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 GAPVD1Q14C86 1478 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 TBC1D32Q96NH3 1257 aa23.97■■□□□ 1.43
PRDM1-202ENST00000369091 SLFN5Q08AF3 891 aa23.96■■□□□ 1.43
PRDM1-202ENST00000369091 MAPK8IP3Q9UPT6 1336 aa23.95■■□□□ 1.42
PRDM1-202ENST00000369091 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
PRDM1-202ENST00000369091 NBPF1Q3BBV0 1214 aa23.95■■□□□ 1.42
PRDM1-202ENST00000369091 WDR62O43379 1518 aa23.94■■□□□ 1.42
PRDM1-202ENST00000369091 CCDC146Q8IYE0 955 aa23.93■■□□□ 1.42
PRDM1-202ENST00000369091 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
PRDM1-202ENST00000369091 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
PRDM1-202ENST00000369091 CAMSAP2Q08AD1 1489 aa23.91■■□□□ 1.42
PRDM1-202ENST00000369091 NUP155O75694 1391 aa23.91■■□□□ 1.42
PRDM1-202ENST00000369091 TPM2P07951 284 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 PANK1Q8TE04 598 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 PDCL3Q9H2J4 239 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 COG6Q9Y2V7 657 aa23.9■■□□□ 1.42
PRDM1-202ENST00000369091 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.42
PRDM1-202ENST00000369091 TRIM44Q96DX7 344 aaPredicted RBP23.89■■□□□ 1.42
PRDM1-202ENST00000369091 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
PRDM1-202ENST00000369091 PPP2R1AP30153 589 aa23.86■■□□□ 1.41
PRDM1-202ENST00000369091 KIAA1211Q6ZU35 1233 aa23.86■■□□□ 1.41
PRDM1-202ENST00000369091 CHMP5Q9NZZ3 219 aa23.86■■□□□ 1.41
PRDM1-202ENST00000369091 ADGBQ8N7X0 1667 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 GAS2L3Q86XJ1 694 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 TESK2Q96S53 571 aa23.85■■□□□ 1.41
PRDM1-202ENST00000369091 TRMT2AQ8IZ69 625 aaKnown RBP23.85■■□□□ 1.41
PRDM1-202ENST00000369091 NKTRP30414 1462 aaKnown RBP23.85■■□□□ 1.41
PRDM1-202ENST00000369091 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
PRDM1-202ENST00000369091 DMRT2Q9Y5R5 561 aa23.84■■□□□ 1.41
PRDM1-202ENST00000369091 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
PRDM1-202ENST00000369091 RBM10P98175 930 aaKnown RBP23.83■■□□□ 1.41
PRDM1-202ENST00000369091 PRDM4Q9UKN5 801 aa23.83■■□□□ 1.41
PRDM1-202ENST00000369091 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
PRDM1-202ENST00000369091 CENPJQ9HC77 1338 aaPredicted RBP23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms