RNA–Protein interactions for RNA: ENST00000368864.8

RPF2-201, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 5

Gene RPF2, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-201ENST00000368864 FOSBP53539 338 aa12.24□□□□□ -0.45
RPF2-201ENST00000368864 RBM26Q5T8P6 1007 aaKnown RBP12.24□□□□□ -0.45
RPF2-201ENST00000368864 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
RPF2-201ENST00000368864 KDM4FA0A1W2PPD8 638 aa12.23□□□□□ -0.45
RPF2-201ENST00000368864 CERKQ8TCT0 537 aa12.22□□□□□ -0.45
RPF2-201ENST00000368864 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
RPF2-201ENST00000368864 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
RPF2-201ENST00000368864 PCDHGA10Q9Y5H3 936 aa12.21□□□□□ -0.45
RPF2-201ENST00000368864 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.462e-6■■■■□ 20
RPF2-201ENST00000368864 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
RPF2-201ENST00000368864 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
RPF2-201ENST00000368864 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
RPF2-201ENST00000368864 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
RPF2-201ENST00000368864 HIC1Q14526 733 aa12.18□□□□□ -0.46
RPF2-201ENST00000368864 ERBB3P21860 1342 aa12.17□□□□□ -0.46
RPF2-201ENST00000368864 EMP3P54852 163 aa12.17□□□□□ -0.46
RPF2-201ENST00000368864 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
RPF2-201ENST00000368864 WIZO95785 1651 aa12.16□□□□□ -0.46
RPF2-201ENST00000368864 KRI1Q8N9T8 703 aaKnown RBP12.16□□□□□ -0.46
RPF2-201ENST00000368864 PRKCSHP14314 528 aaPredicted RBP12.15□□□□□ -0.46
RPF2-201ENST00000368864 ZMYND10O75800 440 aa12.14□□□□□ -0.47
RPF2-201ENST00000368864 PTPREP23469 700 aa12.14□□□□□ -0.47
RPF2-201ENST00000368864 ST18O60284 1047 aa12.13□□□□□ -0.47
RPF2-201ENST00000368864 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
RPF2-201ENST00000368864 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
RPF2-201ENST00000368864 GNPATO15228 680 aa12.12□□□□□ -0.47
RPF2-201ENST00000368864 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
RPF2-201ENST00000368864 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
RPF2-201ENST00000368864 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
RPF2-201ENST00000368864 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
RPF2-201ENST00000368864 PTGDRQ13258 359 aa12.11□□□□□ -0.47
RPF2-201ENST00000368864 C6orf132Q5T0Z8 1188 aa12.1□□□□□ -0.47
RPF2-201ENST00000368864 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
RPF2-201ENST00000368864 PBX2P40425 430 aa12.09□□□□□ -0.47
RPF2-201ENST00000368864 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
RPF2-201ENST00000368864 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
RPF2-201ENST00000368864 MINK1Q8N4C8 1332 aaPredicted RBP12.09□□□□□ -0.47
RPF2-201ENST00000368864 MAP2K5Q13163 448 aa12.08□□□□□ -0.48
RPF2-201ENST00000368864 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
RPF2-201ENST00000368864 AK7Q96M32 723 aa12.07□□□□□ -0.48
RPF2-201ENST00000368864 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
RPF2-201ENST00000368864 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
RPF2-201ENST00000368864 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
RPF2-201ENST00000368864 NCAPD3P42695 1498 aa12.04□□□□□ -0.48
RPF2-201ENST00000368864 GPR37O15354 613 aa12.04□□□□□ -0.48
RPF2-201ENST00000368864 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
RPF2-201ENST00000368864 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
RPF2-201ENST00000368864 KCNK17Q96T54 332 aa12.03□□□□□ -0.48
RPF2-201ENST00000368864 CDHR5Q9HBB8 845 aa12.03□□□□□ -0.48
RPF2-201ENST00000368864 MARVELD3Q96A59 401 aa12.02□□□□□ -0.49
RPF2-201ENST00000368864 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
RPF2-201ENST00000368864 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
RPF2-201ENST00000368864 PRSS12P56730 875 aa12□□□□□ -0.49
RPF2-201ENST00000368864 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
RPF2-201ENST00000368864 ARHGAP33O14559 1287 aa11.99□□□□□ -0.49
RPF2-201ENST00000368864 NBPF26B4DH59 902 aa11.98□□□□□ -0.49
RPF2-201ENST00000368864 IRF6O14896 467 aa11.98□□□□□ -0.49
RPF2-201ENST00000368864 OATP04181 439 aa11.98□□□□□ -0.49
RPF2-201ENST00000368864 PACS2Q86VP3 889 aa11.98□□□□□ -0.49
RPF2-201ENST00000368864 ZNF687Q8N1G0 1237 aa11.98□□□□□ -0.49
RPF2-201ENST00000368864 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
RPF2-201ENST00000368864 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
RPF2-201ENST00000368864 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
RPF2-201ENST00000368864 PADI6Q6TGC4 694 aa11.96□□□□□ -0.49
RPF2-201ENST00000368864 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
RPF2-201ENST00000368864 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
RPF2-201ENST00000368864 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
RPF2-201ENST00000368864 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
RPF2-201ENST00000368864 SLC4A5Q9BY07 1137 aa11.93□□□□□ -0.5
RPF2-201ENST00000368864 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
RPF2-201ENST00000368864 COL9A1P20849 921 aa11.91□□□□□ -0.5
RPF2-201ENST00000368864 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
RPF2-201ENST00000368864 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
RPF2-201ENST00000368864 NBPF3Q9H094 633 aa11.9□□□□□ -0.5
RPF2-201ENST00000368864 TRIM66O15016 1216 aa11.89□□□□□ -0.51
RPF2-201ENST00000368864 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
RPF2-201ENST00000368864 TTC13Q8NBP0 860 aa11.89□□□□□ -0.51
RPF2-201ENST00000368864 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
RPF2-201ENST00000368864 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
RPF2-201ENST00000368864 TK2O00142 265 aa11.87□□□□□ -0.51
RPF2-201ENST00000368864 FECHP22830 423 aa11.87□□□□□ -0.51
RPF2-201ENST00000368864 CLCN1P35523 988 aa11.87□□□□□ -0.51
RPF2-201ENST00000368864 AMHR2Q16671 573 aa11.87□□□□□ -0.51
RPF2-201ENST00000368864 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
RPF2-201ENST00000368864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
RPF2-201ENST00000368864 PSEN2P49810 448 aa11.86□□□□□ -0.51
RPF2-201ENST00000368864 RABGEF1Q9UJ41 708 aa11.86□□□□□ -0.51
RPF2-201ENST00000368864 HDGFP51858 240 aaKnown RBP11.85□□□□□ -0.51
RPF2-201ENST00000368864 PDE4DQ08499 809 aa11.85□□□□□ -0.51
RPF2-201ENST00000368864 METTL3Q86U44 580 aaKnown RBP11.85□□□□□ -0.51
RPF2-201ENST00000368864 PNMA3Q9UL41 463 aa11.84□□□□□ -0.51
RPF2-201ENST00000368864 LSM11P83369 360 aaKnown RBP eCLIP11.83□□□□□ -0.52
RPF2-201ENST00000368864 TATDN2Q93075 761 aa11.83□□□□□ -0.52
RPF2-201ENST00000368864 TSKSQ9UJT2 592 aa11.83□□□□□ -0.52
RPF2-201ENST00000368864 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
RPF2-201ENST00000368864 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
RPF2-201ENST00000368864 DNAJB2P25686 324 aa11.82□□□□□ -0.52
RPF2-201ENST00000368864 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
RPF2-201ENST00000368864 KIAA1468Q9P260 1216 aa11.82□□□□□ -0.52
RPF2-201ENST00000368864 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms