RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
LAMA4-204ENST00000368640 PLXNC1O60486 1568 aa17.61■□□□□ 0.41
LAMA4-204ENST00000368640 FRMPD1Q5SYB0 1578 aa17.61■□□□□ 0.41
LAMA4-204ENST00000368640 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
LAMA4-204ENST00000368640 ADGRL2O95490 1459 aa17.6■□□□□ 0.41
LAMA4-204ENST00000368640 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.4
LAMA4-204ENST00000368640 KIDINS220Q9ULH0 1771 aa17.58■□□□□ 0.4
LAMA4-204ENST00000368640 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
LAMA4-204ENST00000368640 DUOX2Q9NRD8 1548 aa17.56■□□□□ 0.4
LAMA4-204ENST00000368640 NCOA1Q15788 1441 aa17.55■□□□□ 0.4
LAMA4-204ENST00000368640 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
LAMA4-204ENST00000368640 ATP10AO60312 1499 aa17.55■□□□□ 0.4
LAMA4-204ENST00000368640 RIMS1Q86UR5 1692 aaKnown RBP17.54■□□□□ 0.4
LAMA4-204ENST00000368640 A2MP01023 1474 aa17.53■□□□□ 0.4
LAMA4-204ENST00000368640 REREQ9P2R6 1566 aa17.53■□□□□ 0.4
LAMA4-204ENST00000368640 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
LAMA4-204ENST00000368640 MLECQ14165 292 aa17.52■□□□□ 0.4
LAMA4-204ENST00000368640 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
LAMA4-204ENST00000368640 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
LAMA4-204ENST00000368640 ERBINQ96RT1 1412 aa17.52■□□□□ 0.4
LAMA4-204ENST00000368640 GCC2Q8IWJ2 1684 aa17.52■□□□□ 0.39
LAMA4-204ENST00000368640 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
LAMA4-204ENST00000368640 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
LAMA4-204ENST00000368640 EIF2AK4Q9P2K8 1649 aaKnown RBP17.5■□□□□ 0.39
LAMA4-204ENST00000368640 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
LAMA4-204ENST00000368640 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
LAMA4-204ENST00000368640 YEATS2Q9ULM3 1422 aa17.48■□□□□ 0.39
LAMA4-204ENST00000368640 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
LAMA4-204ENST00000368640 AGLP35573 1532 aa17.46■□□□□ 0.39
LAMA4-204ENST00000368640 NAIPQ13075 1403 aa17.46■□□□□ 0.39
LAMA4-204ENST00000368640 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
LAMA4-204ENST00000368640 KANK1Q14678 1352 aa17.44■□□□□ 0.38
LAMA4-204ENST00000368640 HRCP23327 699 aa17.43■□□□□ 0.38
LAMA4-204ENST00000368640 ESF1Q9H501 851 aaKnown RBP17.43■□□□□ 0.38
LAMA4-204ENST00000368640 KIF3BO15066 747 aa17.42■□□□□ 0.38
LAMA4-204ENST00000368640 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
LAMA4-204ENST00000368640 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
LAMA4-204ENST00000368640 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
LAMA4-204ENST00000368640 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
LAMA4-204ENST00000368640 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
LAMA4-204ENST00000368640 GGT6Q6P531 493 aa17.36■□□□□ 0.37
LAMA4-204ENST00000368640 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
LAMA4-204ENST00000368640 UNC13BO14795 1591 aa17.35■□□□□ 0.37
LAMA4-204ENST00000368640 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
LAMA4-204ENST00000368640 DEPDC5O75140 1603 aa17.35■□□□□ 0.37
LAMA4-204ENST00000368640 SIGLEC1Q9BZZ2 1709 aa17.33■□□□□ 0.37
LAMA4-204ENST00000368640 PRDM15P57071 1507 aaPredicted RBP17.33■□□□□ 0.37
LAMA4-204ENST00000368640 CNTLNQ9NXG0 1405 aa17.33■□□□□ 0.36
LAMA4-204ENST00000368640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.36
LAMA4-204ENST00000368640 KDM5DQ9BY66 1539 aa17.32■□□□□ 0.36
LAMA4-204ENST00000368640 NUP155O75694 1391 aa17.32■□□□□ 0.36
LAMA4-204ENST00000368640 WASHC2CQ9Y4E1 1318 aa17.32■□□□□ 0.36
LAMA4-204ENST00000368640 FER1L4A9Z1Z3 1794 aa17.32■□□□□ 0.36
LAMA4-204ENST00000368640 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
LAMA4-204ENST00000368640 PREX1Q8TCU6 1659 aa17.29■□□□□ 0.36
LAMA4-204ENST00000368640 PTPRTO14522 1441 aa17.29■□□□□ 0.36
LAMA4-204ENST00000368640 IQGAP3Q86VI3 1631 aa17.29■□□□□ 0.36
LAMA4-204ENST00000368640 STRCQ7RTU9 1775 aa17.27■□□□□ 0.35
LAMA4-204ENST00000368640 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
LAMA4-204ENST00000368640 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
LAMA4-204ENST00000368640 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
LAMA4-204ENST00000368640 TET3O43151 1660 aa17.25■□□□□ 0.35
LAMA4-204ENST00000368640 MROH1Q8NDA8 1641 aa17.24■□□□□ 0.35
LAMA4-204ENST00000368640 VWDEQ8N2E2 1590 aa17.23■□□□□ 0.35
LAMA4-204ENST00000368640 CLTCQ00610 1675 aaKnown RBP17.23■□□□□ 0.35
LAMA4-204ENST00000368640 ABCC3O15438 1527 aa17.23■□□□□ 0.35
LAMA4-204ENST00000368640 CEP152O94986 1710 aa17.23■□□□□ 0.35
LAMA4-204ENST00000368640 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
LAMA4-204ENST00000368640 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
LAMA4-204ENST00000368640 SETD1BQ9UPS6 1966 aaKnown RBP17.21■□□□□ 0.35
LAMA4-204ENST00000368640 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.34
LAMA4-204ENST00000368640 IQSEC2Q5JU85 1478 aa17.2■□□□□ 0.34
LAMA4-204ENST00000368640 MPHOSPH9Q99550 1183 aa17.2■□□□□ 0.34
LAMA4-204ENST00000368640 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
LAMA4-204ENST00000368640 EFCAB6Q5THR3 1501 aa17.2■□□□□ 0.34
LAMA4-204ENST00000368640 UBAP1LF5GYI3 381 aa17.18■□□□□ 0.34
LAMA4-204ENST00000368640 PZPP20742 1482 aa17.17■□□□□ 0.34
LAMA4-204ENST00000368640 ZMYM3Q14202 1370 aa17.16■□□□□ 0.34
LAMA4-204ENST00000368640 PKD2Q13563 968 aa17.16■□□□□ 0.34
LAMA4-204ENST00000368640 E9PCH4 1651 aa17.13■□□□□ 0.33
LAMA4-204ENST00000368640 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
LAMA4-204ENST00000368640 C3P01024 1663 aa17.12■□□□□ 0.33
LAMA4-204ENST00000368640 NPATQ14207 1427 aa17.12■□□□□ 0.33
LAMA4-204ENST00000368640 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
LAMA4-204ENST00000368640 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
LAMA4-204ENST00000368640 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
LAMA4-204ENST00000368640 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
LAMA4-204ENST00000368640 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
LAMA4-204ENST00000368640 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
LAMA4-204ENST00000368640 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
LAMA4-204ENST00000368640 ERVK-7P63135 1459 aa17.08■□□□□ 0.32
LAMA4-204ENST00000368640 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.32
LAMA4-204ENST00000368640 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
LAMA4-204ENST00000368640 TRPM2O94759 1503 aa17.06■□□□□ 0.32
LAMA4-204ENST00000368640 TNRQ92752 1358 aa17.06■□□□□ 0.32
LAMA4-204ENST00000368640 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
LAMA4-204ENST00000368640 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
LAMA4-204ENST00000368640 NOS1P29475 1434 aa17.04■□□□□ 0.32
LAMA4-204ENST00000368640 KIF1BO60333 1816 aa17.03■□□□□ 0.32
LAMA4-204ENST00000368640 HSPA1LP34931 641 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms