RNA–Protein interactions for RNA: ENST00000368498.6

GOPC-202, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,450 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-202ENST00000368498 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
GOPC-202ENST00000368498 KIF15Q9NS87 1388 aa16.75■□□□□ 0.27
GOPC-202ENST00000368498 ANKRD45Q5TZF3 282 aa16.74■□□□□ 0.27
GOPC-202ENST00000368498 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
GOPC-202ENST00000368498 KIF7Q2M1P5 1343 aa16.72■□□□□ 0.27
GOPC-202ENST00000368498 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
GOPC-202ENST00000368498 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
GOPC-202ENST00000368498 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.27
GOPC-202ENST00000368498 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.26
GOPC-202ENST00000368498 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
GOPC-202ENST00000368498 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
GOPC-202ENST00000368498 RBM10P98175 930 aaKnown RBP16.7■□□□□ 0.26
GOPC-202ENST00000368498 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
GOPC-202ENST00000368498 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
GOPC-202ENST00000368498 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
GOPC-202ENST00000368498 ST18O60284 1047 aa16.69■□□□□ 0.26
GOPC-202ENST00000368498 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
GOPC-202ENST00000368498 WIZO95785 1651 aa16.69■□□□□ 0.26
GOPC-202ENST00000368498 NACADO15069 1562 aa16.69■□□□□ 0.26
GOPC-202ENST00000368498 FHOD3Q2V2M9 1422 aa16.68■□□□□ 0.26
GOPC-202ENST00000368498 USP47Q96K76 1375 aa16.68■□□□□ 0.26
GOPC-202ENST00000368498 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
GOPC-202ENST00000368498 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
GOPC-202ENST00000368498 ZNF771Q7L3S4 317 aaPredicted RBP16.67■□□□□ 0.26
GOPC-202ENST00000368498 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
GOPC-202ENST00000368498 TRAK2O60296 914 aa16.66■□□□□ 0.26
GOPC-202ENST00000368498 CHMP3Q9Y3E7 222 aa16.66■□□□□ 0.26
GOPC-202ENST00000368498 RNF214Q8ND24 703 aa16.65■□□□□ 0.26
GOPC-202ENST00000368498 ZNF592Q92610 1267 aa16.65■□□□□ 0.26
GOPC-202ENST00000368498 MRE11P49959 708 aa16.65■□□□□ 0.26
GOPC-202ENST00000368498 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
GOPC-202ENST00000368498 E9PSI1 815 aa16.64■□□□□ 0.26
GOPC-202ENST00000368498 C22orf23Q9BZE7 217 aa16.64■□□□□ 0.26
GOPC-202ENST00000368498 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
GOPC-202ENST00000368498 ZKSCAN2Q63HK3 967 aa16.63■□□□□ 0.25
GOPC-202ENST00000368498 MCTP1Q6DN14 999 aa16.62■□□□□ 0.25
GOPC-202ENST00000368498 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
GOPC-202ENST00000368498 HNRNPMP52272 730 aaKnown RBP eCLIP16.62■□□□□ 0.25
GOPC-202ENST00000368498 GGT6Q6P531 493 aa16.62■□□□□ 0.25
GOPC-202ENST00000368498 PHLDB1Q86UU1 1377 aa16.62■□□□□ 0.25
GOPC-202ENST00000368498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.61■□□□□ 0.25
GOPC-202ENST00000368498 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
GOPC-202ENST00000368498 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.61■□□□□ 0.25
GOPC-202ENST00000368498 MPNDQ8N594 471 aa16.61■□□□□ 0.25
GOPC-202ENST00000368498 NUTM2DQ5VT03 806 aaPredicted RBP16.61■□□□□ 0.25
GOPC-202ENST00000368498 RILPL2Q969X0 211 aa16.61■□□□□ 0.25
GOPC-202ENST00000368498 PHF14O94880 888 aa16.6■□□□□ 0.25
GOPC-202ENST00000368498 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
GOPC-202ENST00000368498 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
GOPC-202ENST00000368498 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
GOPC-202ENST00000368498 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
GOPC-202ENST00000368498 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.25
GOPC-202ENST00000368498 CCDC18Q5T9S5 1454 aa16.58■□□□□ 0.24
GOPC-202ENST00000368498 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
GOPC-202ENST00000368498 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
GOPC-202ENST00000368498 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
GOPC-202ENST00000368498 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
GOPC-202ENST00000368498 HMMRO75330 724 aa16.56■□□□□ 0.24
GOPC-202ENST00000368498 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
GOPC-202ENST00000368498 CAVIN1Q6NZI2 390 aaKnown RBP16.55■□□□□ 0.24
GOPC-202ENST00000368498 HDGFL2Q7Z4V5 671 aaPredicted RBP16.55■□□□□ 0.24
GOPC-202ENST00000368498 CREBRFQ8IUR6 639 aa16.54■□□□□ 0.24
GOPC-202ENST00000368498 STK31Q9BXU1 1019 aa16.53■□□□□ 0.24
GOPC-202ENST00000368498 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
GOPC-202ENST00000368498 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
GOPC-202ENST00000368498 CSPP1Q1MSJ5 1256 aa16.52■□□□□ 0.24
GOPC-202ENST00000368498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
GOPC-202ENST00000368498 BECN2A8MW95 431 aa16.51■□□□□ 0.23
GOPC-202ENST00000368498 BCAR3O75815 825 aa16.51■□□□□ 0.23
GOPC-202ENST00000368498 ESPNB1AK53 854 aa16.51■□□□□ 0.23
GOPC-202ENST00000368498 PNISRQ8TF01 805 aaKnown RBP16.5■□□□□ 0.23
GOPC-202ENST00000368498 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
GOPC-202ENST00000368498 GOLGA6L19H0YKK7 550 aa16.5■□□□□ 0.23
GOPC-202ENST00000368498 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
GOPC-202ENST00000368498 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
GOPC-202ENST00000368498 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
GOPC-202ENST00000368498 MLECQ14165 292 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 GRPEL1Q9HAV7 217 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 KIF3BO15066 747 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 NUCB2P80303 420 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 GOLGA6L1Q8N7Z2 621 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
GOPC-202ENST00000368498 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
GOPC-202ENST00000368498 KANK1Q14678 1352 aa16.46■□□□□ 0.23
GOPC-202ENST00000368498 C11orf95C9JLR9 678 aaPredicted RBP16.46■□□□□ 0.23
GOPC-202ENST00000368498 TPM4P67936 248 aa16.46■□□□□ 0.23
GOPC-202ENST00000368498 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
GOPC-202ENST00000368498 ZNF644Q9H582 1327 aaPredicted RBP16.46■□□□□ 0.23
GOPC-202ENST00000368498 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
GOPC-202ENST00000368498 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
GOPC-202ENST00000368498 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
GOPC-202ENST00000368498 REC8O95072 547 aa16.45■□□□□ 0.22
GOPC-202ENST00000368498 TPM2P07951 284 aa16.45■□□□□ 0.22
GOPC-202ENST00000368498 MCM4P33991 863 aa16.45■□□□□ 0.22
GOPC-202ENST00000368498 ATP6V1DQ9Y5K8 247 aa16.44■□□□□ 0.22
GOPC-202ENST00000368498 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
GOPC-202ENST00000368498 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
GOPC-202ENST00000368498 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms