RNA–Protein interactions for RNA: ENST00000368385.8

TRIM46-204, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 1,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-204ENST00000368385 COL17A1Q9UMD9 1497 aaPredicted RBP28.07■■■□□ 2.08
TRIM46-204ENST00000368385 MSH5O43196 834 aa28.06■■■□□ 2.08
TRIM46-204ENST00000368385 KIAA1107Q9UPP5 1409 aa28.05■■■□□ 2.08
TRIM46-204ENST00000368385 RICTORQ6R327 1708 aa28.05■■■□□ 2.08
TRIM46-204ENST00000368385 PLEKHH2Q8IVE3 1493 aa28.04■■■□□ 2.08
TRIM46-204ENST00000368385 SMG6Q86US8 1419 aaKnown RBP28.02■■■□□ 2.08
TRIM46-204ENST00000368385 SCAPERQ9BY12 1400 aa28.02■■■□□ 2.08
TRIM46-204ENST00000368385 DHX29Q7Z478 1369 aaKnown RBP28.02■■■□□ 2.08
TRIM46-204ENST00000368385 ZNF777Q9ULD5 760 aaPredicted RBP28.02■■■□□ 2.08
TRIM46-204ENST00000368385 UHRF1BP1Q6BDS2 1440 aa28■■■□□ 2.07
TRIM46-204ENST00000368385 KDM5CP41229 1560 aa28■■■□□ 2.07
TRIM46-204ENST00000368385 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
TRIM46-204ENST00000368385 IRX6P78412 446 aaPredicted RBP28■■■□□ 2.07
TRIM46-204ENST00000368385 FAM9BQ8IZU0 186 aa27.98■■■□□ 2.07
TRIM46-204ENST00000368385 SYCP2Q9BX26 1530 aa27.98■■■□□ 2.07
TRIM46-204ENST00000368385 POGZQ7Z3K3 1410 aa27.98■■■□□ 2.07
TRIM46-204ENST00000368385 ZNF644Q9H582 1327 aaPredicted RBP27.97■■■□□ 2.07
TRIM46-204ENST00000368385 ARHGEF12Q9NZN5 1544 aa27.96■■■□□ 2.07
TRIM46-204ENST00000368385 ROCK2O75116 1388 aaKnown RBP27.96■■■□□ 2.07
TRIM46-204ENST00000368385 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
TRIM46-204ENST00000368385 ZNF518AQ6AHZ1 1483 aa27.95■■■□□ 2.06
TRIM46-204ENST00000368385 SHANK2Q9UPX8 1470 aa27.95■■■□□ 2.06
TRIM46-204ENST00000368385 KDM5DQ9BY66 1539 aa27.94■■■□□ 2.06
TRIM46-204ENST00000368385 RNF123Q5XPI4 1314 aa27.93■■■□□ 2.06
TRIM46-204ENST00000368385 RALGAPBQ86X10 1494 aa27.93■■■□□ 2.06
TRIM46-204ENST00000368385 RAPGEF3O95398 923 aa27.93■■■□□ 2.06
TRIM46-204ENST00000368385 USP47Q96K76 1375 aa27.93■■■□□ 2.06
TRIM46-204ENST00000368385 ZMYM4Q5VZL5 1548 aa27.93■■■□□ 2.06
TRIM46-204ENST00000368385 ANKRD30AQ9BXX3 1397 aa27.92■■■□□ 2.06
TRIM46-204ENST00000368385 ARHGEF5Q12774 1597 aa27.89■■■□□ 2.06
TRIM46-204ENST00000368385 TRAPPC8Q9Y2L5 1435 aa27.89■■■□□ 2.06
TRIM46-204ENST00000368385 HNRNPMP52272 730 aaKnown RBP eCLIP27.87■■■□□ 2.05
TRIM46-204ENST00000368385 MYT1LQ9UL68 1186 aa27.87■■■□□ 2.05
TRIM46-204ENST00000368385 KTN1Q86UP2 1357 aaKnown RBP27.85■■■□□ 2.05
TRIM46-204ENST00000368385 MAGI2Q86UL8 1455 aa27.85■■■□□ 2.05
TRIM46-204ENST00000368385 HECW2Q9P2P5 1572 aa27.85■■■□□ 2.05
TRIM46-204ENST00000368385 NUDCQ9Y266 331 aa27.85■■■□□ 2.05
TRIM46-204ENST00000368385 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
TRIM46-204ENST00000368385 RSPH4AQ5TD94 716 aa27.84■■■□□ 2.05
TRIM46-204ENST00000368385 CCDC141Q6ZP82 1450 aa27.84■■■□□ 2.05
TRIM46-204ENST00000368385 AFAP1Q8N556 730 aa27.83■■■□□ 2.05
TRIM46-204ENST00000368385 MLH3Q9UHC1 1453 aa27.81■■■□□ 2.04
TRIM46-204ENST00000368385 ERICH6Q7L0X2 663 aa27.8■■■□□ 2.04
TRIM46-204ENST00000368385 ZFYVE16Q7Z3T8 1539 aa27.8■■■□□ 2.04
TRIM46-204ENST00000368385 ARHGEF40Q8TER5 1519 aa27.8■■■□□ 2.04
TRIM46-204ENST00000368385 PKD2Q13563 968 aa27.78■■■□□ 2.04
TRIM46-204ENST00000368385 B4GALNT3Q6L9W6 998 aa27.78■■■□□ 2.04
TRIM46-204ENST00000368385 BCL11AQ9H165 835 aa27.78■■■□□ 2.04
TRIM46-204ENST00000368385 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
TRIM46-204ENST00000368385 INO80Q9ULG1 1556 aaPredicted RBP27.78■■■□□ 2.04
TRIM46-204ENST00000368385 E9PCH4 1651 aa27.76■■■□□ 2.03
TRIM46-204ENST00000368385 KIF15Q9NS87 1388 aa27.76■■■□□ 2.03
TRIM46-204ENST00000368385 ATP7AQ04656 1500 aa27.76■■■□□ 2.03
TRIM46-204ENST00000368385 SPAG9O60271 1321 aaKnown RBP27.74■■■□□ 2.03
TRIM46-204ENST00000368385 LRPPRCP42704 1394 aaKnown RBP27.74■■■□□ 2.03
TRIM46-204ENST00000368385 MAST1Q9Y2H9 1570 aa27.74■■■□□ 2.03
TRIM46-204ENST00000368385 C9orf84Q5VXU9 1444 aa27.73■■■□□ 2.03
TRIM46-204ENST00000368385 PNISRQ8TF01 805 aaKnown RBP27.73■■■□□ 2.03
TRIM46-204ENST00000368385 RTEL1-TNFRSF6BF6WH68 1400 aa27.73■■■□□ 2.03
TRIM46-204ENST00000368385 YEATS2Q9ULM3 1422 aa27.72■■■□□ 2.03
TRIM46-204ENST00000368385 BRD4O60885 1362 aaPredicted RBP27.72■■■□□ 2.03
TRIM46-204ENST00000368385 ABCA6Q8N139 1617 aa27.72■■■□□ 2.03
TRIM46-204ENST00000368385 DIP2CQ9Y2E4 1556 aa27.71■■■□□ 2.03
TRIM46-204ENST00000368385 TSPY4P0CV99 314 aa27.7■■■□□ 2.03
TRIM46-204ENST00000368385 TSPY10P0CW01 314 aa27.7■■■□□ 2.03
TRIM46-204ENST00000368385 RALBP1Q15311 655 aa27.66■■■□□ 2.02
TRIM46-204ENST00000368385 NUP155O75694 1391 aa27.66■■■□□ 2.02
TRIM46-204ENST00000368385 ATP10AO60312 1499 aa27.66■■■□□ 2.02
TRIM46-204ENST00000368385 REREQ9P2R6 1566 aa27.66■■■□□ 2.02
TRIM46-204ENST00000368385 PLXNC1O60486 1568 aa27.64■■■□□ 2.02
TRIM46-204ENST00000368385 MYBBP1AQ9BQG0 1328 aaKnown RBP27.63■■■□□ 2.01
TRIM46-204ENST00000368385 CARD11Q9BXL7 1154 aa27.61■■■□□ 2.01
TRIM46-204ENST00000368385 TMC1Q8TDI8 760 aa27.6■■■□□ 2.01
TRIM46-204ENST00000368385 LAMC1P11047 1609 aa27.59■■■□□ 2.01
TRIM46-204ENST00000368385 INSRP06213 1382 aa27.59■■■□□ 2.01
TRIM46-204ENST00000368385 SIGLEC1Q9BZZ2 1709 aa27.58■■■□□ 2.01
TRIM46-204ENST00000368385 TRPM1Q7Z4N2 1603 aa27.57■■■□□ 2
TRIM46-204ENST00000368385 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
TRIM46-204ENST00000368385 CCDC136Q96JN2 1154 aa27.57■■■□□ 2
TRIM46-204ENST00000368385 A2MP01023 1474 aa27.56■■■□□ 2
TRIM46-204ENST00000368385 NOP58Q9Y2X3 529 aaKnown RBP27.55■■■□□ 2
TRIM46-204ENST00000368385 AGLP35573 1532 aa27.53■■■□□ 2
TRIM46-204ENST00000368385 FAM135AQ9P2D6 1515 aa27.53■■■□□ 2
TRIM46-204ENST00000368385 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
TRIM46-204ENST00000368385 PARD3Q8TEW0 1356 aa27.52■■■□□ 2
TRIM46-204ENST00000368385 PDE3BQ13370 1112 aa27.51■■□□□ 1.99
TRIM46-204ENST00000368385 UNC13BO14795 1591 aa27.5■■□□□ 1.99
TRIM46-204ENST00000368385 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
TRIM46-204ENST00000368385 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
TRIM46-204ENST00000368385 ST20-MTHFSA0A0A6YYL1 179 aa27.5■■□□□ 1.99
TRIM46-204ENST00000368385 POLR3GLQ9BT43 218 aa27.5■■□□□ 1.99
TRIM46-204ENST00000368385 WASHC2CQ9Y4E1 1318 aa27.48■■□□□ 1.99
TRIM46-204ENST00000368385 EIF2AK4Q9P2K8 1649 aaKnown RBP27.47■■□□□ 1.99
TRIM46-204ENST00000368385 NLRP13Q86W25 1043 aa27.46■■□□□ 1.99
TRIM46-204ENST00000368385 PRDM15P57071 1507 aaPredicted RBP27.43■■□□□ 1.98
TRIM46-204ENST00000368385 ANP32AP39687 249 aaKnown RBP27.43■■□□□ 1.98
TRIM46-204ENST00000368385 RRP1P56182 461 aaKnown RBP27.43■■□□□ 1.98
TRIM46-204ENST00000368385 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
TRIM46-204ENST00000368385 IPO9Q96P70 1041 aaKnown RBP27.42■■□□□ 1.98
TRIM46-204ENST00000368385 ERBINQ96RT1 1412 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms