RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 INO80Q9ULG1 1556 aaPredicted RBP34.88■■■■□ 3.17
CLK2-203ENST00000368361 ATP7AQ04656 1500 aa34.87■■■■□ 3.17
CLK2-203ENST00000368361 CCDC7Q96M83 1385 aa34.84■■■■□ 3.17
CLK2-203ENST00000368361 RALGAPBQ86X10 1494 aa34.82■■■■□ 3.16
CLK2-203ENST00000368361 CCER2I3L3R5 266 aa34.82■■■■□ 3.16
CLK2-203ENST00000368361 DCAF11Q8TEB1 546 aa34.82■■■■□ 3.16
CLK2-203ENST00000368361 KDM2AQ9Y2K7 1162 aa34.81■■■■□ 3.16
CLK2-203ENST00000368361 POLR1AO95602 1720 aaPredicted RBP34.81■■■■□ 3.16
CLK2-203ENST00000368361 USP47Q96K76 1375 aa34.79■■■■□ 3.16
CLK2-203ENST00000368361 KDM5CP41229 1560 aa34.78■■■■□ 3.16
CLK2-203ENST00000368361 ATP10AO60312 1499 aa34.77■■■■□ 3.16
CLK2-203ENST00000368361 CNTLNQ9NXG0 1405 aa34.76■■■■□ 3.16
CLK2-203ENST00000368361 DEPDC5O75140 1603 aa34.76■■■■□ 3.15
CLK2-203ENST00000368361 CD109Q6YHK3 1445 aa34.75■■■■□ 3.15
CLK2-203ENST00000368361 MYT1LQ9UL68 1186 aa34.74■■■■□ 3.15
CLK2-203ENST00000368361 KIF7Q2M1P5 1343 aa34.74■■■■□ 3.15
CLK2-203ENST00000368361 E9PCH4 1651 aa34.71■■■■□ 3.15
CLK2-203ENST00000368361 RGL3Q3MIN7 710 aa34.7■■■■□ 3.15
CLK2-203ENST00000368361 CARD11Q9BXL7 1154 aa34.69■■■■□ 3.14
CLK2-203ENST00000368361 BCORL1Q5H9F3 1711 aa34.69■■■■□ 3.14
CLK2-203ENST00000368361 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
CLK2-203ENST00000368361 KIDINS220Q9ULH0 1771 aa34.68■■■■□ 3.14
CLK2-203ENST00000368361 CFAP74Q9C0B2 1584 aa34.68■■■■□ 3.14
CLK2-203ENST00000368361 A2MP01023 1474 aa34.67■■■■□ 3.14
CLK2-203ENST00000368361 DHX29Q7Z478 1369 aaKnown RBP34.66■■■■□ 3.14
CLK2-203ENST00000368361 PRAG1Q86YV5 1406 aa34.65■■■■□ 3.14
CLK2-203ENST00000368361 EIF2AK4Q9P2K8 1649 aaKnown RBP34.65■■■■□ 3.14
CLK2-203ENST00000368361 KIF3BO15066 747 aa34.63■■■■□ 3.13
CLK2-203ENST00000368361 TRPM1Q7Z4N2 1603 aa34.62■■■■□ 3.13
CLK2-203ENST00000368361 VWDEQ8N2E2 1590 aa34.61■■■■□ 3.13
CLK2-203ENST00000368361 TET3O43151 1660 aa34.6■■■■□ 3.13
CLK2-203ENST00000368361 ROCK2O75116 1388 aaKnown RBP34.6■■■■□ 3.13
CLK2-203ENST00000368361 KANK1Q14678 1352 aa34.59■■■■□ 3.13
CLK2-203ENST00000368361 POGZQ7Z3K3 1410 aa34.59■■■■□ 3.13
CLK2-203ENST00000368361 MROH1Q8NDA8 1641 aa34.58■■■■□ 3.13
CLK2-203ENST00000368361 PRDM15P57071 1507 aaPredicted RBP34.58■■■■□ 3.13
CLK2-203ENST00000368361 SPHKAPQ2M3C7 1700 aa34.57■■■■□ 3.12
CLK2-203ENST00000368361 TRPM2O94759 1503 aa34.56■■■■□ 3.12
CLK2-203ENST00000368361 CYB5RLQ6IPT4 315 aa34.53■■■■□ 3.12
CLK2-203ENST00000368361 PTPRTO14522 1441 aa34.53■■■■□ 3.12
CLK2-203ENST00000368361 ST20-MTHFSA0A0A6YYL1 179 aa34.52■■■■□ 3.12
CLK2-203ENST00000368361 ARID4BQ4LE39 1312 aaPredicted RBP34.51■■■■□ 3.11
CLK2-203ENST00000368361 MLH3Q9UHC1 1453 aa34.49■■■■□ 3.11
CLK2-203ENST00000368361 HECW2Q9P2P5 1572 aa34.49■■■■□ 3.11
CLK2-203ENST00000368361 NBPF1Q3BBV0 1214 aa34.48■■■■□ 3.11
CLK2-203ENST00000368361 PRKRIP1Q9H875 184 aaPredicted RBP34.48■■■■□ 3.11
CLK2-203ENST00000368361 CLTCL1P53675 1640 aa34.48■■■■□ 3.11
CLK2-203ENST00000368361 NEO1Q92859 1461 aa34.48■■■■□ 3.11
CLK2-203ENST00000368361 CEP152O94986 1710 aa34.48■■■■□ 3.11
CLK2-203ENST00000368361 POLR3GLQ9BT43 218 aa34.47■■■■□ 3.11
CLK2-203ENST00000368361 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
CLK2-203ENST00000368361 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
CLK2-203ENST00000368361 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
CLK2-203ENST00000368361 GPRASP1Q5JY77 1395 aa34.46■■■■□ 3.11
CLK2-203ENST00000368361 FRMPD1Q5SYB0 1578 aa34.43■■■■□ 3.1
CLK2-203ENST00000368361 LAMC1P11047 1609 aa34.42■■■■□ 3.1
CLK2-203ENST00000368361 RNF17Q9BXT8 1623 aaKnown RBP34.41■■■■□ 3.1
CLK2-203ENST00000368361 MAP3K4Q9Y6R4 1608 aa34.41■■■■□ 3.1
CLK2-203ENST00000368361 EFCAB6Q5THR3 1501 aa34.4■■■■□ 3.1
CLK2-203ENST00000368361 ABCA6Q8N139 1617 aa34.39■■■■□ 3.1
CLK2-203ENST00000368361 RAPGEF3O95398 923 aa34.38■■■■□ 3.09
CLK2-203ENST00000368361 PPRC1Q5VV67 1664 aaKnown RBP34.37■■■■□ 3.09
CLK2-203ENST00000368361 CCDC184Q52MB2 194 aa34.35■■■■□ 3.09
CLK2-203ENST00000368361 LMTK2Q8IWU2 1503 aa34.35■■■■□ 3.09
CLK2-203ENST00000368361 MADDQ8WXG6 1647 aa34.34■■■■□ 3.09
CLK2-203ENST00000368361 GLI2P10070 1586 aa34.31■■■■□ 3.08
CLK2-203ENST00000368361 UGGT1Q9NYU2 1555 aa34.31■■■■□ 3.08
CLK2-203ENST00000368361 RICTORQ6R327 1708 aa34.29■■■■□ 3.08
CLK2-203ENST00000368361 GGT6Q6P531 493 aa34.27■■■■□ 3.08
CLK2-203ENST00000368361 NEURL4Q96JN8 1562 aa34.26■■■■□ 3.08
CLK2-203ENST00000368361 DIP2CQ9Y2E4 1556 aa34.25■■■■□ 3.07
CLK2-203ENST00000368361 STAC3Q96MF2 364 aa34.24■■■■□ 3.07
CLK2-203ENST00000368361 MRS2Q9HD23 443 aa34.23■■■■□ 3.07
CLK2-203ENST00000368361 KIF1BO60333 1816 aa34.22■■■■□ 3.07
CLK2-203ENST00000368361 TESK2Q96S53 571 aa34.21■■■■□ 3.07
CLK2-203ENST00000368361 DIP2BQ9P265 1576 aa34.2■■■■□ 3.07
CLK2-203ENST00000368361 HNRNPUQ00839 825 aaKnown RBP eCLIP34.19■■■■□ 3.06
CLK2-203ENST00000368361 CNGB1Q14028 1251 aaPredicted RBP34.19■■■■□ 3.06
CLK2-203ENST00000368361 NPATQ14207 1427 aa34.19■■■■□ 3.06
CLK2-203ENST00000368361 COL17A1Q9UMD9 1497 aaPredicted RBP34.19■■■■□ 3.06
CLK2-203ENST00000368361 FAM69CQ0P6D2 419 aa34.19■■■■□ 3.06
CLK2-203ENST00000368361 ABCC3O15438 1527 aa34.17■■■■□ 3.06
CLK2-203ENST00000368361 MROH2AA6NES4 1674 aa34.15■■■■□ 3.06
CLK2-203ENST00000368361 DISP3Q9P2K9 1392 aa34.15■■■■□ 3.06
CLK2-203ENST00000368361 WASHC2CQ9Y4E1 1318 aa34.15■■■■□ 3.06
CLK2-203ENST00000368361 IQGAP1P46940 1657 aa34.15■■■■□ 3.06
CLK2-203ENST00000368361 YEATS2Q9ULM3 1422 aa34.14■■■■□ 3.06
CLK2-203ENST00000368361 CFAP65Q6ZU64 1925 aaKnown RBP34.14■■■■□ 3.06
CLK2-203ENST00000368361 FAM9BQ8IZU0 186 aa34.12■■■■□ 3.05
CLK2-203ENST00000368361 IFT172Q9UG01 1749 aa34.1■■■■□ 3.05
CLK2-203ENST00000368361 MYOM2P54296 1465 aa34.1■■■■□ 3.05
CLK2-203ENST00000368361 SUPT16HQ9Y5B9 1047 aaKnown RBP34.1■■■■□ 3.05
CLK2-203ENST00000368361 CAMSAP1Q5T5Y3 1602 aa34.1■■■■□ 3.05
CLK2-203ENST00000368361 KIAA1210Q9ULL0 1709 aa34.09■■■■□ 3.05
CLK2-203ENST00000368361 TSPOAP1O95153 1857 aa34.07■■■■□ 3.05
CLK2-203ENST00000368361 ADGRB3O60242 1522 aa34.07■■■■□ 3.04
CLK2-203ENST00000368361 SCAF11Q99590 1463 aaKnown RBP34.07■■■■□ 3.04
CLK2-203ENST00000368361 TMF1P82094 1093 aa34.06■■■■□ 3.04
CLK2-203ENST00000368361 ADGRF5Q8IZF2 1346 aa34.05■■■■□ 3.04
CLK2-203ENST00000368361 SIGLEC1Q9BZZ2 1709 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms