RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NYAP1Q6ZVC0 841 aa10.65□□□□□ -0.7
ECHDC1-201ENST00000368287 LAPTM4BQ86VI4 370 aa10.65□□□□□ -0.7
ECHDC1-201ENST00000368287 KCNC4Q03721 635 aa10.63□□□□□ -0.71
ECHDC1-201ENST00000368287 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
ECHDC1-201ENST00000368287 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
ECHDC1-201ENST00000368287 ZFRQ96KR1 1074 aaKnown RBP10.62□□□□□ -0.71
ECHDC1-201ENST00000368287 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
ECHDC1-201ENST00000368287 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
ECHDC1-201ENST00000368287 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
ECHDC1-201ENST00000368287 PHF14O94880 888 aa10.59□□□□□ -0.71
ECHDC1-201ENST00000368287 MFSD10Q14728 455 aa10.59□□□□□ -0.71
ECHDC1-201ENST00000368287 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
ECHDC1-201ENST00000368287 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
ECHDC1-201ENST00000368287 LAPTM4AQ15012 233 aa10.56□□□□□ -0.72
ECHDC1-201ENST00000368287 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-201ENST00000368287 TSR3Q9UJK0 312 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-201ENST00000368287 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
ECHDC1-201ENST00000368287 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
ECHDC1-201ENST00000368287 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
ECHDC1-201ENST00000368287 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
ECHDC1-201ENST00000368287 HPS5Q9UPZ3 1129 aa10.52□□□□□ -0.73
ECHDC1-201ENST00000368287 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
ECHDC1-201ENST00000368287 EPAS1Q99814 870 aa10.51□□□□□ -0.73
ECHDC1-201ENST00000368287 GFRA3O60609 400 aa10.5□□□□□ -0.73
ECHDC1-201ENST00000368287 TRAF7Q6Q0C0 670 aa10.48□□□□□ -0.73
ECHDC1-201ENST00000368287 RBM33Q96EV2 1170 aaKnown RBP10.47□□□□□ -0.73
ECHDC1-201ENST00000368287 LCE2BO14633 110 aa10.45□□□□□ -0.74
ECHDC1-201ENST00000368287 PPP4CP60510 307 aa10.43□□□□□ -0.74
ECHDC1-201ENST00000368287 DPYSL4O14531 572 aa10.42□□□□□ -0.74
ECHDC1-201ENST00000368287 PACS2Q86VP3 889 aa10.41□□□□□ -0.74
ECHDC1-201ENST00000368287 PRKD2Q9BZL6 878 aa10.41□□□□□ -0.74
ECHDC1-201ENST00000368287 NRG2O14511 850 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-201ENST00000368287 CADPS2Q86UW7 1296 aa10.4□□□□□ -0.74
ECHDC1-201ENST00000368287 DDX12PQ92771 950 aa10.4□□□□□ -0.74
ECHDC1-201ENST00000368287 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
ECHDC1-201ENST00000368287 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
ECHDC1-201ENST00000368287 TJAP1Q5JTD0 557 aa10.37□□□□□ -0.75
ECHDC1-201ENST00000368287 MAP3K7O43318 606 aa10.36□□□□□ -0.75
ECHDC1-201ENST00000368287 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
ECHDC1-201ENST00000368287 NBR1Q14596 966 aa10.35□□□□□ -0.75
ECHDC1-201ENST00000368287 MTRQ99707 1265 aa10.35□□□□□ -0.75
ECHDC1-201ENST00000368287 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
ECHDC1-201ENST00000368287 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
ECHDC1-201ENST00000368287 PPP1R18Q6NYC8 613 aa10.34□□□□□ -0.75
ECHDC1-201ENST00000368287 SAMD7Q7Z3H4 446 aa10.34□□□□□ -0.75
ECHDC1-201ENST00000368287 V9GY48 417 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-201ENST00000368287 SMAPO00193 183 aa10.32□□□□□ -0.76
ECHDC1-201ENST00000368287 DCAF8L2P0C7V8 631 aa10.31□□□□□ -0.76
ECHDC1-201ENST00000368287 ZNF787Q6DD87 383 aa10.3□□□□□ -0.76
ECHDC1-201ENST00000368287 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
ECHDC1-201ENST00000368287 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-201ENST00000368287 RNF40O75150 1001 aa10.28□□□□□ -0.76
ECHDC1-201ENST00000368287 PRSS12P56730 875 aa10.28□□□□□ -0.76
ECHDC1-201ENST00000368287 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
ECHDC1-201ENST00000368287 NBPF26B4DH59 902 aa10.27□□□□□ -0.77
ECHDC1-201ENST00000368287 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
ECHDC1-201ENST00000368287 PNMA3Q9UL41 463 aa10.26□□□□□ -0.77
ECHDC1-201ENST00000368287 PDIA6Q15084 440 aa10.25□□□□□ -0.77
ECHDC1-201ENST00000368287 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
ECHDC1-201ENST00000368287 TATDN2Q93075 761 aa10.25□□□□□ -0.77
ECHDC1-201ENST00000368287 FAM198AQ9UFP1 575 aa10.25□□□□□ -0.77
ECHDC1-201ENST00000368287 HDGFP51858 240 aaKnown RBP10.24□□□□□ -0.77
ECHDC1-201ENST00000368287 GGCXP38435 758 aa10.23□□□□□ -0.77
ECHDC1-201ENST00000368287 APLP1P51693 650 aa10.22□□□□□ -0.77
ECHDC1-201ENST00000368287 SPDYE16A6NNV3 312 aaPredicted RBP10.21□□□□□ -0.77
ECHDC1-201ENST00000368287 C3orf80F5H4A9 247 aa10.21□□□□□ -0.77
ECHDC1-201ENST00000368287 NKX2-3Q8TAU0 364 aa10.21□□□□□ -0.77
ECHDC1-201ENST00000368287 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
ECHDC1-201ENST00000368287 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
ECHDC1-201ENST00000368287 ZNF775Q96BV0 537 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-201ENST00000368287 COPS2P61201 443 aa10.18□□□□□ -0.78
ECHDC1-201ENST00000368287 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
ECHDC1-201ENST00000368287 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
ECHDC1-201ENST00000368287 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
ECHDC1-201ENST00000368287 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
ECHDC1-201ENST00000368287 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-201ENST00000368287 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
ECHDC1-201ENST00000368287 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-201ENST00000368287 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
ECHDC1-201ENST00000368287 ZPR1O75312 459 aa10.1□□□□□ -0.79
ECHDC1-201ENST00000368287 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
ECHDC1-201ENST00000368287 SLC19A1P41440 591 aa10.08□□□□□ -0.8
ECHDC1-201ENST00000368287 TRIM67Q6ZTA4 783 aa10.08□□□□□ -0.8
ECHDC1-201ENST00000368287 OSBPP22059 807 aa10.07□□□□□ -0.8
ECHDC1-201ENST00000368287 E2F4Q16254 413 aa10.07□□□□□ -0.8
ECHDC1-201ENST00000368287 PRR14Q9BWN1 585 aa10.07□□□□□ -0.8
ECHDC1-201ENST00000368287 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
ECHDC1-201ENST00000368287 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
ECHDC1-201ENST00000368287 RNF223E7ERA6 249 aa10.05□□□□□ -0.8
ECHDC1-201ENST00000368287 DGAT1O75907 488 aa10.05□□□□□ -0.8
ECHDC1-201ENST00000368287 MYT1Q01538 1121 aa10.05□□□□□ -0.8
ECHDC1-201ENST00000368287 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
ECHDC1-201ENST00000368287 ARIH1Q9Y4X5 557 aaPredicted RBP10.04□□□□□ -0.8
ECHDC1-201ENST00000368287 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
ECHDC1-201ENST00000368287 ZNF598Q86UK7 904 aaKnown RBP10.02□□□□□ -0.81
ECHDC1-201ENST00000368287 PRR20EP86478 221 aa10.01□□□□□ -0.81
ECHDC1-201ENST00000368287 PRR20CP86479 221 aa10.01□□□□□ -0.81
ECHDC1-201ENST00000368287 PRR20DP86480 221 aa10.01□□□□□ -0.81
ECHDC1-201ENST00000368287 PRR20BP86481 221 aa10.01□□□□□ -0.81
ECHDC1-201ENST00000368287 PRR20AP86496 221 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms