RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 UHRF1BP1Q6BDS2 1440 aa19.31■□□□□ 0.68
SNHG28-201ENST00000368102 USP47Q96K76 1375 aa19.31■□□□□ 0.68
SNHG28-201ENST00000368102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNHG28-201ENST00000368102 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
SNHG28-201ENST00000368102 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
SNHG28-201ENST00000368102 DCAF11Q8TEB1 546 aa19.27■□□□□ 0.68
SNHG28-201ENST00000368102 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
SNHG28-201ENST00000368102 RALGAPBQ86X10 1494 aa19.26■□□□□ 0.67
SNHG28-201ENST00000368102 UNC13BO14795 1591 aa19.26■□□□□ 0.67
SNHG28-201ENST00000368102 CARD11Q9BXL7 1154 aa19.25■□□□□ 0.67
SNHG28-201ENST00000368102 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
SNHG28-201ENST00000368102 DUOX2Q9NRD8 1548 aa19.24■□□□□ 0.67
SNHG28-201ENST00000368102 TRAPPC8Q9Y2L5 1435 aa19.24■□□□□ 0.67
SNHG28-201ENST00000368102 POLR1AO95602 1720 aaPredicted RBP19.24■□□□□ 0.67
SNHG28-201ENST00000368102 CCDC144AA2RUR9 1427 aa19.24■□□□□ 0.67
SNHG28-201ENST00000368102 ABCC1P33527 1531 aa19.23■□□□□ 0.67
SNHG28-201ENST00000368102 KDM5CP41229 1560 aa19.23■□□□□ 0.67
SNHG28-201ENST00000368102 PLA2R1Q13018 1463 aa19.22■□□□□ 0.67
SNHG28-201ENST00000368102 ERBINQ96RT1 1412 aa19.22■□□□□ 0.67
SNHG28-201ENST00000368102 ERICH6BQ5W0A0 696 aa19.2■□□□□ 0.66
SNHG28-201ENST00000368102 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
SNHG28-201ENST00000368102 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
SNHG28-201ENST00000368102 WDR7Q9Y4E6 1490 aa19.19■□□□□ 0.66
SNHG28-201ENST00000368102 IQGAP3Q86VI3 1631 aa19.19■□□□□ 0.66
SNHG28-201ENST00000368102 DHX29Q7Z478 1369 aaKnown RBP19.18■□□□□ 0.66
SNHG28-201ENST00000368102 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
SNHG28-201ENST00000368102 ARID4BQ4LE39 1312 aaPredicted RBP19.18■□□□□ 0.66
SNHG28-201ENST00000368102 MSH5O43196 834 aa19.18■□□□□ 0.66
SNHG28-201ENST00000368102 ARAP3Q8WWN8 1544 aa19.17■□□□□ 0.66
SNHG28-201ENST00000368102 MAGI2Q86UL8 1455 aa19.17■□□□□ 0.66
SNHG28-201ENST00000368102 ST20-MTHFSA0A0A6YYL1 179 aa19.16■□□□□ 0.66
SNHG28-201ENST00000368102 RIMBP3CA6NJZ7 1639 aa19.16■□□□□ 0.66
SNHG28-201ENST00000368102 RIMBP3BA6NNM3 1639 aa19.16■□□□□ 0.66
SNHG28-201ENST00000368102 RIMBP3Q9UFD9 1639 aa19.16■□□□□ 0.66
SNHG28-201ENST00000368102 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
SNHG28-201ENST00000368102 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
SNHG28-201ENST00000368102 PRAG1Q86YV5 1406 aa19.14■□□□□ 0.65
SNHG28-201ENST00000368102 B4GALNT3Q6L9W6 998 aa19.14■□□□□ 0.65
SNHG28-201ENST00000368102 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
SNHG28-201ENST00000368102 ATP10AO60312 1499 aa19.12■□□□□ 0.65
SNHG28-201ENST00000368102 FANCAO15360 1455 aa19.11■□□□□ 0.65
SNHG28-201ENST00000368102 A2MP01023 1474 aa19.11■□□□□ 0.65
SNHG28-201ENST00000368102 ZFYVE16Q7Z3T8 1539 aa19.1■□□□□ 0.65
SNHG28-201ENST00000368102 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
SNHG28-201ENST00000368102 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
SNHG28-201ENST00000368102 ABCA9Q8IUA7 1624 aa19.08■□□□□ 0.64
SNHG28-201ENST00000368102 MYT1LQ9UL68 1186 aa19.07■□□□□ 0.64
SNHG28-201ENST00000368102 TRPM1Q7Z4N2 1603 aa19.07■□□□□ 0.64
SNHG28-201ENST00000368102 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
SNHG28-201ENST00000368102 SCAPERQ9BY12 1400 aa19.06■□□□□ 0.64
SNHG28-201ENST00000368102 PPP4R2Q9NY27 417 aa19.06■□□□□ 0.64
SNHG28-201ENST00000368102 GPRASP1Q5JY77 1395 aa19.05■□□□□ 0.64
SNHG28-201ENST00000368102 ADGRL1O94910 1474 aa19.05■□□□□ 0.64
SNHG28-201ENST00000368102 ATP7AQ04656 1500 aa19.04■□□□□ 0.64
SNHG28-201ENST00000368102 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNHG28-201ENST00000368102 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
SNHG28-201ENST00000368102 KIF3BO15066 747 aa19.01■□□□□ 0.63
SNHG28-201ENST00000368102 E9PCH4 1651 aa19■□□□□ 0.63
SNHG28-201ENST00000368102 KANK1Q14678 1352 aa18.98■□□□□ 0.63
SNHG28-201ENST00000368102 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
SNHG28-201ENST00000368102 SALL2Q9Y467 1007 aaPredicted RBP18.98■□□□□ 0.63
SNHG28-201ENST00000368102 DEPDC5O75140 1603 aa18.98■□□□□ 0.63
SNHG28-201ENST00000368102 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
SNHG28-201ENST00000368102 PTPRTO14522 1441 aa18.97■□□□□ 0.63
SNHG28-201ENST00000368102 EIF2AK4Q9P2K8 1649 aaKnown RBP18.97■□□□□ 0.63
SNHG28-201ENST00000368102 TRPM2O94759 1503 aa18.96■□□□□ 0.63
SNHG28-201ENST00000368102 PRDM15P57071 1507 aaPredicted RBP18.96■□□□□ 0.63
SNHG28-201ENST00000368102 TESK2Q96S53 571 aa18.96■□□□□ 0.63
SNHG28-201ENST00000368102 LAMC1P11047 1609 aa18.95■□□□□ 0.62
SNHG28-201ENST00000368102 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
SNHG28-201ENST00000368102 SMG6Q86US8 1419 aaKnown RBP18.93■□□□□ 0.62
SNHG28-201ENST00000368102 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
SNHG28-201ENST00000368102 TET3O43151 1660 aa18.92■□□□□ 0.62
SNHG28-201ENST00000368102 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
SNHG28-201ENST00000368102 COL17A1Q9UMD9 1497 aaPredicted RBP18.92■□□□□ 0.62
SNHG28-201ENST00000368102 RALBP1Q15311 655 aa18.91■□□□□ 0.62
SNHG28-201ENST00000368102 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
SNHG28-201ENST00000368102 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
SNHG28-201ENST00000368102 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
SNHG28-201ENST00000368102 CLTCL1P53675 1640 aa18.9■□□□□ 0.62
SNHG28-201ENST00000368102 KTN1Q86UP2 1357 aaKnown RBP18.9■□□□□ 0.62
SNHG28-201ENST00000368102 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
SNHG28-201ENST00000368102 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.61
SNHG28-201ENST00000368102 TMF1P82094 1093 aa18.89■□□□□ 0.61
SNHG28-201ENST00000368102 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
SNHG28-201ENST00000368102 PER1O15534 1290 aaPredicted RBP18.88■□□□□ 0.61
SNHG28-201ENST00000368102 KIDINS220Q9ULH0 1771 aa18.88■□□□□ 0.61
SNHG28-201ENST00000368102 MADDQ8WXG6 1647 aa18.87■□□□□ 0.61
SNHG28-201ENST00000368102 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
SNHG28-201ENST00000368102 CEP152O94986 1710 aa18.87■□□□□ 0.61
SNHG28-201ENST00000368102 BRD4O60885 1362 aaPredicted RBP18.86■□□□□ 0.61
SNHG28-201ENST00000368102 CC2D1BQ5T0F9 858 aaKnown RBP18.86■□□□□ 0.61
SNHG28-201ENST00000368102 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
SNHG28-201ENST00000368102 POGZQ7Z3K3 1410 aa18.84■□□□□ 0.61
SNHG28-201ENST00000368102 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
SNHG28-201ENST00000368102 PARD3Q8TEW0 1356 aa18.83■□□□□ 0.61
SNHG28-201ENST00000368102 PANK3Q9H999 370 aa18.83■□□□□ 0.6
SNHG28-201ENST00000368102 UGGT1Q9NYU2 1555 aa18.82■□□□□ 0.6
SNHG28-201ENST00000368102 CCDC136Q96JN2 1154 aa18.81■□□□□ 0.6
SNHG28-201ENST00000368102 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms