RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
CD48-202ENST00000368046 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
CD48-202ENST00000368046 KIF3BO15066 747 aa15.19■□□□□ 0.02
CD48-202ENST00000368046 PPARGC1BQ86YN6 1023 aaKnown RBP15.19■□□□□ 0.02
CD48-202ENST00000368046 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
CD48-202ENST00000368046 RIMS1Q86UR5 1692 aaKnown RBP15.18■□□□□ 0.02
CD48-202ENST00000368046 TCOF1Q13428 1488 aaKnown RBP15.17■□□□□ 0.02
CD48-202ENST00000368046 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
CD48-202ENST00000368046 ABCC5O15440 1437 aa15.17■□□□□ 0.02
CD48-202ENST00000368046 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
CD48-202ENST00000368046 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
CD48-202ENST00000368046 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
CD48-202ENST00000368046 PTPN23Q9H3S7 1636 aa15.15■□□□□ 0.02
CD48-202ENST00000368046 ADGBQ8N7X0 1667 aa15.14■□□□□ 0.01
CD48-202ENST00000368046 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
CD48-202ENST00000368046 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
CD48-202ENST00000368046 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
CD48-202ENST00000368046 DAPK1P53355 1430 aa15.13■□□□□ 0.01
CD48-202ENST00000368046 MAST1Q9Y2H9 1570 aa15.13■□□□□ 0.01
CD48-202ENST00000368046 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
CD48-202ENST00000368046 ANKRD30AQ9BXX3 1397 aa15.1■□□□□ 0.01
CD48-202ENST00000368046 SHANK2Q9UPX8 1470 aa15.09■□□□□ 0.01
CD48-202ENST00000368046 SLC4A2P04920 1241 aa15.08■□□□□ 0
CD48-202ENST00000368046 HSPA2P54652 639 aa15.08■□□□□ 0
CD48-202ENST00000368046 KIF15Q9NS87 1388 aa15.08■□□□□ 0
CD48-202ENST00000368046 NCOA1Q15788 1441 aa15.08■□□□□ 0
CD48-202ENST00000368046 LMTK3Q96Q04 1460 aa15.08■□□□□ 0
CD48-202ENST00000368046 DUOX2Q9NRD8 1548 aa15.07■□□□□ 0
CD48-202ENST00000368046 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
CD48-202ENST00000368046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.06■□□□□ 0
CD48-202ENST00000368046 NPATQ14207 1427 aa15.05■□□□□ -0
CD48-202ENST00000368046 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
CD48-202ENST00000368046 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
CD48-202ENST00000368046 C3P01024 1663 aa15.03■□□□□ -0
CD48-202ENST00000368046 ERBINQ96RT1 1412 aa15.03■□□□□ -0
CD48-202ENST00000368046 FBXO31Q5XUX0 539 aaPredicted RBP15.03■□□□□ -0
CD48-202ENST00000368046 PTPRKQ15262 1439 aa15.02■□□□□ -0
CD48-202ENST00000368046 SETD1BQ9UPS6 1966 aaKnown RBP15.02■□□□□ -0
CD48-202ENST00000368046 ITGAEP38570 1179 aa15.02■□□□□ -0
CD48-202ENST00000368046 MROH2AA6NES4 1674 aa15.02□□□□□ -0.01
CD48-202ENST00000368046 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
CD48-202ENST00000368046 CLTCQ00610 1675 aaKnown RBP15.01□□□□□ -0.01
CD48-202ENST00000368046 CHRDL2Q6WN34 429 aa15.01□□□□□ -0.01
CD48-202ENST00000368046 FAM135AQ9P2D6 1515 aa15.01□□□□□ -0.01
CD48-202ENST00000368046 CROCC2H7BZ55 1655 aa15□□□□□ -0.01
CD48-202ENST00000368046 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
CD48-202ENST00000368046 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
CD48-202ENST00000368046 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
CD48-202ENST00000368046 KANK1Q14678 1352 aa14.98□□□□□ -0.01
CD48-202ENST00000368046 PREX1Q8TCU6 1659 aa14.97□□□□□ -0.01
CD48-202ENST00000368046 RRBP1Q9P2E9 1410 aaKnown RBP14.97□□□□□ -0.01
CD48-202ENST00000368046 ANKRD50Q9ULJ7 1429 aa14.97□□□□□ -0.01
CD48-202ENST00000368046 PZPP20742 1482 aa14.96□□□□□ -0.01
CD48-202ENST00000368046 RNF17Q9BXT8 1623 aaKnown RBP14.96□□□□□ -0.01
CD48-202ENST00000368046 TNRQ92752 1358 aa14.95□□□□□ -0.02
CD48-202ENST00000368046 ABCC3O15438 1527 aa14.94□□□□□ -0.02
CD48-202ENST00000368046 ARHGAP31Q2M1Z3 1444 aa14.92□□□□□ -0.02
CD48-202ENST00000368046 MROH1Q8NDA8 1641 aa14.92□□□□□ -0.02
CD48-202ENST00000368046 THEMISQ8N1K5 641 aaPredicted RBP14.92□□□□□ -0.02
CD48-202ENST00000368046 PKD2Q13563 968 aa14.9□□□□□ -0.02
CD48-202ENST00000368046 PRDM15P57071 1507 aaPredicted RBP14.9□□□□□ -0.02
CD48-202ENST00000368046 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
CD48-202ENST00000368046 ZC3H13Q5T200 1668 aaKnown RBP14.89□□□□□ -0.03
CD48-202ENST00000368046 NCKAP5LQ9HCH0 1330 aa14.89□□□□□ -0.03
CD48-202ENST00000368046 NLRP1Q9C000 1473 aa14.88□□□□□ -0.03
CD48-202ENST00000368046 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
CD48-202ENST00000368046 LMTK2Q8IWU2 1503 aa14.87□□□□□ -0.03
CD48-202ENST00000368046 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
CD48-202ENST00000368046 PTPRTO14522 1441 aa14.86□□□□□ -0.03
CD48-202ENST00000368046 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
CD48-202ENST00000368046 ANKLE2Q86XL3 938 aa14.86□□□□□ -0.03
CD48-202ENST00000368046 ERVK-7P63135 1459 aa14.86□□□□□ -0.03
CD48-202ENST00000368046 NUP155O75694 1391 aa14.85□□□□□ -0.03
CD48-202ENST00000368046 SPATA31D1Q6ZQQ2 1576 aa14.85□□□□□ -0.03
CD48-202ENST00000368046 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
CD48-202ENST00000368046 CAMSAP1Q5T5Y3 1602 aa14.85□□□□□ -0.03
CD48-202ENST00000368046 MYO3AQ8NEV4 1616 aa14.84□□□□□ -0.03
CD48-202ENST00000368046 PLA2R1Q13018 1463 aa14.84□□□□□ -0.03
CD48-202ENST00000368046 IDI1Q13907 227 aa14.84□□□□□ -0.03
CD48-202ENST00000368046 SLC52A1Q9NWF4 448 aa14.84□□□□□ -0.03
CD48-202ENST00000368046 STRCQ7RTU9 1775 aa14.83□□□□□ -0.03
CD48-202ENST00000368046 SP7Q8TDD2 431 aaPredicted RBP14.83□□□□□ -0.04
CD48-202ENST00000368046 CEP152O94986 1710 aa14.83□□□□□ -0.04
CD48-202ENST00000368046 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
CD48-202ENST00000368046 NAIPQ13075 1403 aa14.82□□□□□ -0.04
CD48-202ENST00000368046 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
CD48-202ENST00000368046 ZNF142P52746 1687 aaPredicted RBP14.81□□□□□ -0.04
CD48-202ENST00000368046 NOS1P29475 1434 aa14.8□□□□□ -0.04
CD48-202ENST00000368046 RPRD2Q5VT52 1461 aaKnown RBP14.79□□□□□ -0.04
CD48-202ENST00000368046 CERKQ8TCT0 537 aa14.79□□□□□ -0.04
CD48-202ENST00000368046 HFM1A2PYH4 1435 aa14.78□□□□□ -0.04
CD48-202ENST00000368046 TRIM52Q96A61 297 aa14.78□□□□□ -0.04
CD48-202ENST00000368046 UNC13BO14795 1591 aa14.77□□□□□ -0.04
CD48-202ENST00000368046 EFCAB6Q5THR3 1501 aa14.77□□□□□ -0.04
CD48-202ENST00000368046 TXNDC2Q86VQ3 553 aa14.77□□□□□ -0.05
CD48-202ENST00000368046 EID1Q9Y6B2 187 aa14.77□□□□□ -0.05
CD48-202ENST00000368046 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
CD48-202ENST00000368046 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
CD48-202ENST00000368046 LTKP29376 864 aa14.75□□□□□ -0.05
CD48-202ENST00000368046 FBXO41Q8TF61 875 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms