RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 GCC2Q8IWJ2 1684 aa14.45□□□□□ -0.1
NECTIN4-201ENST00000368012 ANKRD30AQ9BXX3 1397 aa14.44□□□□□ -0.1
NECTIN4-201ENST00000368012 KIAA1107Q9UPP5 1409 aa14.43□□□□□ -0.1
NECTIN4-201ENST00000368012 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
NECTIN4-201ENST00000368012 PZPP20742 1482 aa14.43□□□□□ -0.1
NECTIN4-201ENST00000368012 ADAMTS8Q9UP79 889 aa14.42□□□□□ -0.1
NECTIN4-201ENST00000368012 WDR62O43379 1518 aa14.42□□□□□ -0.1
NECTIN4-201ENST00000368012 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
NECTIN4-201ENST00000368012 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
NECTIN4-201ENST00000368012 NUP153P49790 1475 aaKnown RBP14.41□□□□□ -0.1
NECTIN4-201ENST00000368012 SLKQ9H2G2 1235 aaPredicted RBP14.41□□□□□ -0.1
NECTIN4-201ENST00000368012 TMF1P82094 1093 aa14.4□□□□□ -0.1
NECTIN4-201ENST00000368012 JPH4Q96JJ6 628 aa14.4□□□□□ -0.1
NECTIN4-201ENST00000368012 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
NECTIN4-201ENST00000368012 BACH2Q9BYV9 841 aa14.4□□□□□ -0.1
NECTIN4-201ENST00000368012 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
NECTIN4-201ENST00000368012 CAMSAP2Q08AD1 1489 aa14.39□□□□□ -0.11
NECTIN4-201ENST00000368012 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.38□□□□□ -0.11
NECTIN4-201ENST00000368012 RNF123Q5XPI4 1314 aa14.37□□□□□ -0.11
NECTIN4-201ENST00000368012 BCL2L13Q9BXK5 485 aa14.37□□□□□ -0.11
NECTIN4-201ENST00000368012 RRP7AQ9Y3A4 280 aaKnown RBP14.37□□□□□ -0.11
NECTIN4-201ENST00000368012 CLUAP1Q96AJ1 413 aa14.36□□□□□ -0.11
NECTIN4-201ENST00000368012 TROQ12816 1431 aaPredicted RBP14.36□□□□□ -0.11
NECTIN4-201ENST00000368012 BCORL1Q5H9F3 1711 aa14.36□□□□□ -0.11
NECTIN4-201ENST00000368012 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
NECTIN4-201ENST00000368012 APAF1O14727 1248 aa14.35□□□□□ -0.11
NECTIN4-201ENST00000368012 DNMT1P26358 1616 aaKnown RBP14.34□□□□□ -0.11
NECTIN4-201ENST00000368012 NFKBIBQ15653 356 aa14.34□□□□□ -0.11
NECTIN4-201ENST00000368012 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
NECTIN4-201ENST00000368012 GPATCH8Q9UKJ3 1502 aaKnown RBP14.34□□□□□ -0.11
NECTIN4-201ENST00000368012 DISP1Q96F81 1524 aa14.33□□□□□ -0.11
NECTIN4-201ENST00000368012 BRD4O60885 1362 aaPredicted RBP14.33□□□□□ -0.12
NECTIN4-201ENST00000368012 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
NECTIN4-201ENST00000368012 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
NECTIN4-201ENST00000368012 ARID4BQ4LE39 1312 aaPredicted RBP14.32□□□□□ -0.12
NECTIN4-201ENST00000368012 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
NECTIN4-201ENST00000368012 BCAR3O75815 825 aa14.31□□□□□ -0.12
NECTIN4-201ENST00000368012 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
NECTIN4-201ENST00000368012 GZF1Q9H116 711 aaPredicted RBP14.31□□□□□ -0.12
NECTIN4-201ENST00000368012 ADAMTS12P58397 1594 aa14.31□□□□□ -0.12
NECTIN4-201ENST00000368012 GSE1Q14687 1217 aa14.31□□□□□ -0.12
NECTIN4-201ENST00000368012 COG6Q9Y2V7 657 aa14.31□□□□□ -0.12
NECTIN4-201ENST00000368012 CCDC144AA2RUR9 1427 aa14.29□□□□□ -0.12
NECTIN4-201ENST00000368012 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
NECTIN4-201ENST00000368012 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
NECTIN4-201ENST00000368012 LRPPRCP42704 1394 aaKnown RBP14.27□□□□□ -0.12
NECTIN4-201ENST00000368012 MBD5Q9P267 1494 aa14.27□□□□□ -0.12
NECTIN4-201ENST00000368012 KIAA0556O60303 1618 aa14.27□□□□□ -0.13
NECTIN4-201ENST00000368012 MS4A1P11836 297 aa14.27□□□□□ -0.13
NECTIN4-201ENST00000368012 PANK1Q8TE04 598 aa14.27□□□□□ -0.13
NECTIN4-201ENST00000368012 PBRM1Q86U86 1689 aa14.27□□□□□ -0.13
NECTIN4-201ENST00000368012 NUTM2DQ5VT03 806 aaPredicted RBP14.27□□□□□ -0.13
NECTIN4-201ENST00000368012 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
NECTIN4-201ENST00000368012 KIF14Q15058 1648 aa14.26□□□□□ -0.13
NECTIN4-201ENST00000368012 RAPGEF6Q8TEU7 1601 aa14.26□□□□□ -0.13
NECTIN4-201ENST00000368012 UPF2Q9HAU5 1272 aaKnown RBP14.25□□□□□ -0.13
NECTIN4-201ENST00000368012 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
NECTIN4-201ENST00000368012 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
NECTIN4-201ENST00000368012 KDM5CP41229 1560 aa14.25□□□□□ -0.13
NECTIN4-201ENST00000368012 GRIN2AQ12879 1464 aa14.24□□□□□ -0.13
NECTIN4-201ENST00000368012 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
NECTIN4-201ENST00000368012 PPP2R1AP30153 589 aa14.24□□□□□ -0.13
NECTIN4-201ENST00000368012 CENPQQ7L2Z9 268 aaPredicted RBP14.24□□□□□ -0.13
NECTIN4-201ENST00000368012 DISP3Q9P2K9 1392 aa14.23□□□□□ -0.13
NECTIN4-201ENST00000368012 CARMIL2Q6F5E8 1435 aa14.23□□□□□ -0.13
NECTIN4-201ENST00000368012 USP35Q9P2H5 1018 aa14.21□□□□□ -0.13
NECTIN4-201ENST00000368012 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
NECTIN4-201ENST00000368012 IFT140Q96RY7 1462 aa14.19□□□□□ -0.14
NECTIN4-201ENST00000368012 PARD3Q8TEW0 1356 aa14.19□□□□□ -0.14
NECTIN4-201ENST00000368012 U2SURPO15042 1029 aaKnown RBP14.19□□□□□ -0.14
NECTIN4-201ENST00000368012 BECN1Q14457 450 aa14.19□□□□□ -0.14
NECTIN4-201ENST00000368012 TESK2Q96S53 571 aa14.19□□□□□ -0.14
NECTIN4-201ENST00000368012 MORC1Q86VD1 984 aa14.18□□□□□ -0.14
NECTIN4-201ENST00000368012 TRAK1Q9UPV9 953 aa14.18□□□□□ -0.14
NECTIN4-201ENST00000368012 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
NECTIN4-201ENST00000368012 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
NECTIN4-201ENST00000368012 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
NECTIN4-201ENST00000368012 CDCA8Q53HL2 280 aa14.17□□□□□ -0.14
NECTIN4-201ENST00000368012 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
NECTIN4-201ENST00000368012 DUSP27Q5VZP5 1158 aa14.16□□□□□ -0.14
NECTIN4-201ENST00000368012 MAGI1Q96QZ7 1491 aaPredicted RBP14.16□□□□□ -0.14
NECTIN4-201ENST00000368012 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
NECTIN4-201ENST00000368012 KIF3BO15066 747 aa14.16□□□□□ -0.14
NECTIN4-201ENST00000368012 MFAP1P55081 439 aaKnown RBP14.16□□□□□ -0.14
NECTIN4-201ENST00000368012 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
NECTIN4-201ENST00000368012 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
NECTIN4-201ENST00000368012 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
NECTIN4-201ENST00000368012 ATP10BO94823 1461 aa14.15□□□□□ -0.14
NECTIN4-201ENST00000368012 IGHDP01880 384 aa14.15□□□□□ -0.14
NECTIN4-201ENST00000368012 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
NECTIN4-201ENST00000368012 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
NECTIN4-201ENST00000368012 PRAG1Q86YV5 1406 aa14.14□□□□□ -0.15
NECTIN4-201ENST00000368012 POLR1AO95602 1720 aaPredicted RBP14.14□□□□□ -0.15
NECTIN4-201ENST00000368012 POGKQ9P215 609 aa14.14□□□□□ -0.15
NECTIN4-201ENST00000368012 TNNQ9UQP3 1299 aa14.13□□□□□ -0.15
NECTIN4-201ENST00000368012 SEC24BO95487 1268 aa14.12□□□□□ -0.15
NECTIN4-201ENST00000368012 STK26Q9P289 416 aa14.12□□□□□ -0.15
NECTIN4-201ENST00000368012 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
NECTIN4-201ENST00000368012 PLEKHH1Q9ULM0 1364 aa14.12□□□□□ -0.15
NECTIN4-201ENST00000368012 ERBINQ96RT1 1412 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms