RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 TPM4P67936 248 aa10.3□□□□□ -0.76
SHPRH-203ENST00000367505 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
SHPRH-203ENST00000367505 CCDC34Q96HJ3 373 aa10.3□□□□□ -0.76
SHPRH-203ENST00000367505 EXOC6Q8TAG9 804 aa10.29□□□□□ -0.76
SHPRH-203ENST00000367505 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.761e-6■□□□□ 10.6
SHPRH-203ENST00000367505 PANK3Q9H999 370 aa10.29□□□□□ -0.76
SHPRH-203ENST00000367505 GGT6Q6P531 493 aa10.29□□□□□ -0.76
SHPRH-203ENST00000367505 CLUAP1Q96AJ1 413 aa10.29□□□□□ -0.76
SHPRH-203ENST00000367505 APBB1O00213 710 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 HSP90AA2PQ14568 343 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-203ENST00000367505 CUX1P39880 1505 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 ZKSCAN2Q63HK3 967 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 LMOD2Q6P5Q4 547 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
SHPRH-203ENST00000367505 STK26Q9P289 416 aa10.28□□□□□ -0.76
SHPRH-203ENST00000367505 CCDC7Q96M83 1385 aa10.27□□□□□ -0.76
SHPRH-203ENST00000367505 CNTLNQ9NXG0 1405 aa10.27□□□□□ -0.76
SHPRH-203ENST00000367505 CRBNQ96SW2 442 aa10.27□□□□□ -0.76
SHPRH-203ENST00000367505 KIF3AQ9Y496 699 aa10.27□□□□□ -0.76
SHPRH-203ENST00000367505 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
SHPRH-203ENST00000367505 ATP6V1DQ9Y5K8 247 aa10.27□□□□□ -0.77
SHPRH-203ENST00000367505 CHMP4CQ96CF2 233 aa10.26□□□□□ -0.77
SHPRH-203ENST00000367505 HNRNPMP52272 730 aaKnown RBP eCLIP10.26□□□□□ -0.772e-6■■■■■ 31.6
SHPRH-203ENST00000367505 MYOM3Q5VTT5 1437 aa10.26□□□□□ -0.77
SHPRH-203ENST00000367505 FGD6Q6ZV73 1430 aa10.25□□□□□ -0.77
SHPRH-203ENST00000367505 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
SHPRH-203ENST00000367505 KIF3BO15066 747 aa10.25□□□□□ -0.77
SHPRH-203ENST00000367505 DDX49Q9Y6V7 483 aaKnown RBP10.25□□□□□ -0.77
SHPRH-203ENST00000367505 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
SHPRH-203ENST00000367505 CHMP5Q9NZZ3 219 aa10.25□□□□□ -0.77
SHPRH-203ENST00000367505 DDX19BQ9UMR2 479 aa10.24□□□□□ -0.77
SHPRH-203ENST00000367505 KIF21BO75037 1637 aa10.24□□□□□ -0.77
SHPRH-203ENST00000367505 KIF16BQ96L93 1317 aa10.24□□□□□ -0.77
SHPRH-203ENST00000367505 BRD4O60885 1362 aaPredicted RBP10.23□□□□□ -0.77
SHPRH-203ENST00000367505 SOX12O15370 315 aa10.23□□□□□ -0.77
SHPRH-203ENST00000367505 PLIN1O60240 522 aa10.22□□□□□ -0.77
SHPRH-203ENST00000367505 LRRC9Q6ZRR7 1453 aa10.22□□□□□ -0.77
SHPRH-203ENST00000367505 REC8O95072 547 aa10.22□□□□□ -0.77
SHPRH-203ENST00000367505 TAOK2Q9UL54 1235 aa10.22□□□□□ -0.77
SHPRH-203ENST00000367505 KIF7Q2M1P5 1343 aa10.22□□□□□ -0.77
SHPRH-203ENST00000367505 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.77
SHPRH-203ENST00000367505 ERICH3Q5RHP9 1530 aa10.21□□□□□ -0.77
SHPRH-203ENST00000367505 COG6Q9Y2V7 657 aa10.21□□□□□ -0.78
SHPRH-203ENST00000367505 EVC2Q86UK5 1308 aa10.21□□□□□ -0.78
SHPRH-203ENST00000367505 ANKRD45Q5TZF3 282 aa10.21□□□□□ -0.78
SHPRH-203ENST00000367505 APAF1O14727 1248 aa10.2□□□□□ -0.78
SHPRH-203ENST00000367505 JPH4Q96JJ6 628 aa10.2□□□□□ -0.78
SHPRH-203ENST00000367505 IGF1RP08069 1367 aa10.2□□□□□ -0.78
SHPRH-203ENST00000367505 WASHC2AQ641Q2 1341 aa10.2□□□□□ -0.78
SHPRH-203ENST00000367505 WASHC2CQ9Y4E1 1318 aa10.2□□□□□ -0.78
SHPRH-203ENST00000367505 ROCK1Q13464 1354 aa10.19□□□□□ -0.78
SHPRH-203ENST00000367505 SLC4A3P48751 1232 aa10.19□□□□□ -0.78
SHPRH-203ENST00000367505 SLC4A10Q6U841 1118 aa10.19□□□□□ -0.78
SHPRH-203ENST00000367505 NUCB2P80303 420 aa10.19□□□□□ -0.78
SHPRH-203ENST00000367505 DZIP1LQ8IYY4 767 aaKnown RBP10.19□□□□□ -0.78
SHPRH-203ENST00000367505 NPHP1O15259 732 aa10.19□□□□□ -0.78
SHPRH-203ENST00000367505 GOLGA6L1Q8N7Z2 621 aa10.19□□□□□ -0.78
SHPRH-203ENST00000367505 VGFO15240 615 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-203ENST00000367505 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
SHPRH-203ENST00000367505 API5Q9BZZ5 524 aaKnown RBP10.18□□□□□ -0.78
SHPRH-203ENST00000367505 TNNT3P45378 269 aaPredicted RBP10.18□□□□□ -0.78
SHPRH-203ENST00000367505 FYCO1Q9BQS8 1478 aa10.18□□□□□ -0.78
SHPRH-203ENST00000367505 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
SHPRH-203ENST00000367505 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
SHPRH-203ENST00000367505 RRP7AQ9Y3A4 280 aaKnown RBP10.18□□□□□ -0.78
SHPRH-203ENST00000367505 CASKIN1Q8WXD9 1431 aa10.17□□□□□ -0.78
SHPRH-203ENST00000367505 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
SHPRH-203ENST00000367505 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.17□□□□□ -0.78
SHPRH-203ENST00000367505 NFKBIBQ15653 356 aa10.17□□□□□ -0.78
SHPRH-203ENST00000367505 RUNDC1Q96C34 613 aa10.17□□□□□ -0.78
SHPRH-203ENST00000367505 GORABQ5T7V8 394 aa10.17□□□□□ -0.78
SHPRH-203ENST00000367505 RUFY2Q8WXA3 655 aa10.16□□□□□ -0.78
SHPRH-203ENST00000367505 GOLGA6L19H0YKK7 550 aa10.16□□□□□ -0.78
SHPRH-203ENST00000367505 BCL2L13Q9BXK5 485 aa10.16□□□□□ -0.78
SHPRH-203ENST00000367505 MRE11P49959 708 aa10.16□□□□□ -0.78
SHPRH-203ENST00000367505 SF3A1Q15459 793 aaKnown RBP10.15□□□□□ -0.78
SHPRH-203ENST00000367505 MLECQ14165 292 aa10.15□□□□□ -0.78
SHPRH-203ENST00000367505 AMPHP49418 695 aa10.14□□□□□ -0.79
SHPRH-203ENST00000367505 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
SHPRH-203ENST00000367505 C22orf23Q9BZE7 217 aa10.14□□□□□ -0.79
SHPRH-203ENST00000367505 MTERF4Q7Z6M4 381 aaKnown RBP10.14□□□□□ -0.79
SHPRH-203ENST00000367505 ARID3AQ99856 593 aa10.14□□□□□ -0.79
SHPRH-203ENST00000367505 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-203ENST00000367505 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 BECN2A8MW95 431 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 TPM3P06753 285 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 INTS3Q68E01 1043 aaKnown RBP10.13□□□□□ -0.79
SHPRH-203ENST00000367505 NOL8Q76FK4 1167 aaKnown RBP10.13□□□□□ -0.79
SHPRH-203ENST00000367505 MAP7D2Q96T17 732 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 H3BQV1 296 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
SHPRH-203ENST00000367505 IFFO2Q5TF58 517 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 RILPL2Q969X0 211 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 COG3Q96JB2 828 aa10.13□□□□□ -0.79
SHPRH-203ENST00000367505 ISY1Q9ULR0 285 aaKnown RBP10.13□□□□□ -0.79
SHPRH-203ENST00000367505 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
SHPRH-203ENST00000367505 ZKSCAN1P17029 563 aaPredicted RBP10.13□□□□□ -0.79
SHPRH-203ENST00000367505 GAPVD1Q14C86 1478 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms