RNA–Protein interactions for RNA: ENST00000367064.7

CD55-204, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD55, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-204ENST00000367064 FAM135AQ9P2D6 1515 aa22.37■■□□□ 1.17
CD55-204ENST00000367064 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
CD55-204ENST00000367064 UNC13BO14795 1591 aa22.36■■□□□ 1.17
CD55-204ENST00000367064 PRKRIP1Q9H875 184 aaPredicted RBP22.35■■□□□ 1.17
CD55-204ENST00000367064 CARD11Q9BXL7 1154 aa22.34■■□□□ 1.17
CD55-204ENST00000367064 RGL3Q3MIN7 710 aa22.34■■□□□ 1.17
CD55-204ENST00000367064 FKBP8Q14318 412 aa22.33■■□□□ 1.17
CD55-204ENST00000367064 DUOX2Q9NRD8 1548 aa22.33■■□□□ 1.16
CD55-204ENST00000367064 TRAPPC8Q9Y2L5 1435 aa22.31■■□□□ 1.16
CD55-204ENST00000367064 BCORL1Q5H9F3 1711 aa22.3■■□□□ 1.16
CD55-204ENST00000367064 POLR1AO95602 1720 aaPredicted RBP22.29■■□□□ 1.16
CD55-204ENST00000367064 FANCAO15360 1455 aa22.29■■□□□ 1.16
CD55-204ENST00000367064 RTEL1-TNFRSF6BF6WH68 1400 aa22.29■■□□□ 1.16
CD55-204ENST00000367064 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
CD55-204ENST00000367064 RBM19Q9Y4C8 960 aaKnown RBP22.28■■□□□ 1.16
CD55-204ENST00000367064 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
CD55-204ENST00000367064 ERBINQ96RT1 1412 aa22.28■■□□□ 1.16
CD55-204ENST00000367064 CCDC144AA2RUR9 1427 aa22.28■■□□□ 1.16
CD55-204ENST00000367064 KDM5CP41229 1560 aa22.27■■□□□ 1.16
CD55-204ENST00000367064 MRS2Q9HD23 443 aa22.27■■□□□ 1.16
CD55-204ENST00000367064 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.16
CD55-204ENST00000367064 ZFYVE16Q7Z3T8 1539 aa22.27■■□□□ 1.16
CD55-204ENST00000367064 AFAP1Q8N556 730 aa22.27■■□□□ 1.15
CD55-204ENST00000367064 IQGAP3Q86VI3 1631 aa22.26■■□□□ 1.15
CD55-204ENST00000367064 RALGAPBQ86X10 1494 aa22.26■■□□□ 1.15
CD55-204ENST00000367064 INO80Q9ULG1 1556 aaPredicted RBP22.25■■□□□ 1.15
CD55-204ENST00000367064 ST20-MTHFSA0A0A6YYL1 179 aa22.25■■□□□ 1.15
CD55-204ENST00000367064 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
CD55-204ENST00000367064 NEFLP07196 543 aa22.22■■□□□ 1.15
CD55-204ENST00000367064 CFAP74Q9C0B2 1584 aa22.22■■□□□ 1.15
CD55-204ENST00000367064 ROCK2O75116 1388 aaKnown RBP22.22■■□□□ 1.15
CD55-204ENST00000367064 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
CD55-204ENST00000367064 SPAG9O60271 1321 aaKnown RBP22.21■■□□□ 1.15
CD55-204ENST00000367064 ADGRL1O94910 1474 aa22.2■■□□□ 1.14
CD55-204ENST00000367064 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
CD55-204ENST00000367064 ATP7AQ04656 1500 aa22.18■■□□□ 1.14
CD55-204ENST00000367064 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
CD55-204ENST00000367064 RIMBP3CA6NJZ7 1639 aa22.18■■□□□ 1.14
CD55-204ENST00000367064 RIMBP3BA6NNM3 1639 aa22.18■■□□□ 1.14
CD55-204ENST00000367064 RIMBP3Q9UFD9 1639 aa22.18■■□□□ 1.14
CD55-204ENST00000367064 DHX29Q7Z478 1369 aaKnown RBP22.16■■□□□ 1.14
CD55-204ENST00000367064 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
CD55-204ENST00000367064 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
CD55-204ENST00000367064 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.13
CD55-204ENST00000367064 MSH5O43196 834 aa22.14■■□□□ 1.13
CD55-204ENST00000367064 CD109Q6YHK3 1445 aa22.13■■□□□ 1.13
CD55-204ENST00000367064 EIF2AK4Q9P2K8 1649 aaKnown RBP22.12■■□□□ 1.13
CD55-204ENST00000367064 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
CD55-204ENST00000367064 A2MP01023 1474 aa22.12■■□□□ 1.13
CD55-204ENST00000367064 KIDINS220Q9ULH0 1771 aa22.11■■□□□ 1.13
CD55-204ENST00000367064 ATP10AO60312 1499 aa22.09■■□□□ 1.13
CD55-204ENST00000367064 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
CD55-204ENST00000367064 IRX6P78412 446 aaPredicted RBP22.09■■□□□ 1.13
CD55-204ENST00000367064 TRPM1Q7Z4N2 1603 aa22.08■■□□□ 1.13
CD55-204ENST00000367064 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.12
CD55-204ENST00000367064 GLI2P10070 1586 aa22.07■■□□□ 1.12
CD55-204ENST00000367064 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
CD55-204ENST00000367064 SENP3-EIF4A1A0A087X0R7 540 aa22.06■■□□□ 1.12
CD55-204ENST00000367064 NEO1Q92859 1461 aa22.05■■□□□ 1.12
CD55-204ENST00000367064 POGZQ7Z3K3 1410 aa22.05■■□□□ 1.12
CD55-204ENST00000367064 KIF3BO15066 747 aa22.04■■□□□ 1.12
CD55-204ENST00000367064 E9PCH4 1651 aa22.03■■□□□ 1.12
CD55-204ENST00000367064 MROH1Q8NDA8 1641 aa22.02■■□□□ 1.12
CD55-204ENST00000367064 TET3O43151 1660 aa22.02■■□□□ 1.12
CD55-204ENST00000367064 PRDM15P57071 1507 aaPredicted RBP22.02■■□□□ 1.12
CD55-204ENST00000367064 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
CD55-204ENST00000367064 HECW2Q9P2P5 1572 aa22■■□□□ 1.11
CD55-204ENST00000367064 ZBED9Q6R2W3 1325 aa22■■□□□ 1.11
CD55-204ENST00000367064 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
CD55-204ENST00000367064 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
CD55-204ENST00000367064 RNF17Q9BXT8 1623 aaKnown RBP21.97■■□□□ 1.11
CD55-204ENST00000367064 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
CD55-204ENST00000367064 SPHKAPQ2M3C7 1700 aa21.96■■□□□ 1.11
CD55-204ENST00000367064 KANK1Q14678 1352 aa21.95■■□□□ 1.11
CD55-204ENST00000367064 RICTORQ6R327 1708 aa21.95■■□□□ 1.1
CD55-204ENST00000367064 TESK2Q96S53 571 aa21.94■■□□□ 1.1
CD55-204ENST00000367064 TRPM2O94759 1503 aa21.94■■□□□ 1.1
CD55-204ENST00000367064 DISP3Q9P2K9 1392 aa21.94■■□□□ 1.1
CD55-204ENST00000367064 FRMPD1Q5SYB0 1578 aa21.94■■□□□ 1.1
CD55-204ENST00000367064 DIP2BQ9P265 1576 aa21.94■■□□□ 1.1
CD55-204ENST00000367064 ERICH6Q7L0X2 663 aa21.93■■□□□ 1.1
CD55-204ENST00000367064 PTPRTO14522 1441 aa21.93■■□□□ 1.1
CD55-204ENST00000367064 ABCA6Q8N139 1617 aa21.93■■□□□ 1.1
CD55-204ENST00000367064 PNISRQ8TF01 805 aaKnown RBP21.92■■□□□ 1.1
CD55-204ENST00000367064 LMTK2Q8IWU2 1503 aa21.91■■□□□ 1.1
CD55-204ENST00000367064 CEP152O94986 1710 aa21.91■■□□□ 1.1
CD55-204ENST00000367064 MYBBP1AQ9BQG0 1328 aaKnown RBP21.89■■□□□ 1.1
CD55-204ENST00000367064 CLTCL1P53675 1640 aa21.89■■□□□ 1.1
CD55-204ENST00000367064 RALBP1Q15311 655 aa21.89■■□□□ 1.09
CD55-204ENST00000367064 TMF1P82094 1093 aa21.88■■□□□ 1.09
CD55-204ENST00000367064 CC2D1BQ5T0F9 858 aaKnown RBP21.88■■□□□ 1.09
CD55-204ENST00000367064 COL17A1Q9UMD9 1497 aaPredicted RBP21.87■■□□□ 1.09
CD55-204ENST00000367064 PANK3Q9H999 370 aa21.87■■□□□ 1.09
CD55-204ENST00000367064 EFCAB6Q5THR3 1501 aa21.87■■□□□ 1.09
CD55-204ENST00000367064 LAMC1P11047 1609 aa21.87■■□□□ 1.09
CD55-204ENST00000367064 NEURL4Q96JN8 1562 aa21.86■■□□□ 1.09
CD55-204ENST00000367064 PPRC1Q5VV67 1664 aaKnown RBP21.86■■□□□ 1.09
CD55-204ENST00000367064 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
CD55-204ENST00000367064 PER1O15534 1290 aaPredicted RBP21.86■■□□□ 1.09
CD55-204ENST00000367064 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms