RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
NLRP3-204ENST00000366497 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
NLRP3-204ENST00000366497 FTSJ3Q8IY81 847 aaKnown RBP11.56□□□□□ -0.56
NLRP3-204ENST00000366497 NBPF1Q3BBV0 1214 aa11.56□□□□□ -0.56
NLRP3-204ENST00000366497 PTPRKQ15262 1439 aa11.56□□□□□ -0.56
NLRP3-204ENST00000366497 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
NLRP3-204ENST00000366497 U2AF1L5P0DN76 240 aaPredicted RBP11.56□□□□□ -0.56
NLRP3-204ENST00000366497 U2AF1Q01081 240 aaKnown RBP eCLIP11.56□□□□□ -0.56
NLRP3-204ENST00000366497 HDGFL2Q7Z4V5 671 aaPredicted RBP11.55□□□□□ -0.56
NLRP3-204ENST00000366497 RGS3P49796 1198 aa11.55□□□□□ -0.56
NLRP3-204ENST00000366497 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
NLRP3-204ENST00000366497 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
NLRP3-204ENST00000366497 VGFO15240 615 aaPredicted RBP11.54□□□□□ -0.56
NLRP3-204ENST00000366497 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
NLRP3-204ENST00000366497 SOX12O15370 315 aa11.54□□□□□ -0.56
NLRP3-204ENST00000366497 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
NLRP3-204ENST00000366497 TSHZ2Q9NRE2 1034 aa11.53□□□□□ -0.56
NLRP3-204ENST00000366497 THOC2Q8NI27 1593 aaKnown RBP11.53□□□□□ -0.56
NLRP3-204ENST00000366497 NCOA1Q15788 1441 aa11.53□□□□□ -0.56
NLRP3-204ENST00000366497 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
NLRP3-204ENST00000366497 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.57
NLRP3-204ENST00000366497 FAM69CQ0P6D2 419 aa11.52□□□□□ -0.57
NLRP3-204ENST00000366497 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
NLRP3-204ENST00000366497 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
NLRP3-204ENST00000366497 STAC3Q96MF2 364 aa11.52□□□□□ -0.57
NLRP3-204ENST00000366497 AKNAQ7Z591 1439 aa11.52□□□□□ -0.57
NLRP3-204ENST00000366497 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.57
NLRP3-204ENST00000366497 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
NLRP3-204ENST00000366497 PNNQ9H307 717 aaKnown RBP11.51□□□□□ -0.57
NLRP3-204ENST00000366497 TERF2IPQ9NYB0 399 aa11.51□□□□□ -0.57
NLRP3-204ENST00000366497 CFAP70Q5T0N1 1121 aa11.5□□□□□ -0.57
NLRP3-204ENST00000366497 C11orf95C9JLR9 678 aaPredicted RBP11.49□□□□□ -0.57
NLRP3-204ENST00000366497 LMOD2Q6P5Q4 547 aa11.49□□□□□ -0.57
NLRP3-204ENST00000366497 MAPKBP1O60336 1514 aa11.49□□□□□ -0.57
NLRP3-204ENST00000366497 NUP153P49790 1475 aaKnown RBP11.49□□□□□ -0.57
NLRP3-204ENST00000366497 CCDC141Q6ZP82 1450 aa11.48□□□□□ -0.57
NLRP3-204ENST00000366497 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
NLRP3-204ENST00000366497 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
NLRP3-204ENST00000366497 GPATCH8Q9UKJ3 1502 aaKnown RBP11.48□□□□□ -0.57
NLRP3-204ENST00000366497 CTTNBP2Q8WZ74 1663 aa11.48□□□□□ -0.57
NLRP3-204ENST00000366497 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
NLRP3-204ENST00000366497 CENPJQ9HC77 1338 aaPredicted RBP11.47□□□□□ -0.57
NLRP3-204ENST00000366497 ANP32EQ9BTT0 268 aa11.47□□□□□ -0.57
NLRP3-204ENST00000366497 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
NLRP3-204ENST00000366497 EVC2Q86UK5 1308 aa11.47□□□□□ -0.57
NLRP3-204ENST00000366497 MINK1Q8N4C8 1332 aaPredicted RBP11.46□□□□□ -0.57
NLRP3-204ENST00000366497 DDRGK1Q96HY6 314 aa11.46□□□□□ -0.58
NLRP3-204ENST00000366497 MS4A1P11836 297 aa11.46□□□□□ -0.58
NLRP3-204ENST00000366497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.58
NLRP3-204ENST00000366497 ADAMTS12P58397 1594 aa11.46□□□□□ -0.58
NLRP3-204ENST00000366497 RAPGEF3O95398 923 aa11.45□□□□□ -0.58
NLRP3-204ENST00000366497 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
NLRP3-204ENST00000366497 ATP10BO94823 1461 aa11.45□□□□□ -0.58
NLRP3-204ENST00000366497 KIF14Q15058 1648 aa11.45□□□□□ -0.58
NLRP3-204ENST00000366497 NUTM2FA1L443 756 aa11.45□□□□□ -0.58
NLRP3-204ENST00000366497 APAF1O14727 1248 aa11.44□□□□□ -0.58
NLRP3-204ENST00000366497 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
NLRP3-204ENST00000366497 PLIN1O60240 522 aa11.44□□□□□ -0.58
NLRP3-204ENST00000366497 HAP1P54257 671 aaPredicted RBP11.43□□□□□ -0.58
NLRP3-204ENST00000366497 RPRD2Q5VT52 1461 aaKnown RBP11.43□□□□□ -0.58
NLRP3-204ENST00000366497 RAPGEF6Q8TEU7 1601 aa11.43□□□□□ -0.58
NLRP3-204ENST00000366497 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
NLRP3-204ENST00000366497 BRD4O60885 1362 aaPredicted RBP11.42□□□□□ -0.58
NLRP3-204ENST00000366497 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
NLRP3-204ENST00000366497 NOP58Q9Y2X3 529 aaKnown RBP11.41□□□□□ -0.58
NLRP3-204ENST00000366497 BECN1Q14457 450 aa11.41□□□□□ -0.58
NLRP3-204ENST00000366497 CFAP43Q8NDM7 1665 aa11.41□□□□□ -0.58
NLRP3-204ENST00000366497 EXOC6Q8TAG9 804 aa11.41□□□□□ -0.58
NLRP3-204ENST00000366497 CLUAP1Q96AJ1 413 aa11.41□□□□□ -0.58
NLRP3-204ENST00000366497 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
NLRP3-204ENST00000366497 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
NLRP3-204ENST00000366497 KIAA0556O60303 1618 aa11.4□□□□□ -0.58
NLRP3-204ENST00000366497 ADAMTS8Q9UP79 889 aa11.4□□□□□ -0.58
NLRP3-204ENST00000366497 WDR62O43379 1518 aa11.4□□□□□ -0.59
NLRP3-204ENST00000366497 TCERG1O14776 1098 aaKnown RBP11.39□□□□□ -0.59
NLRP3-204ENST00000366497 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
NLRP3-204ENST00000366497 CHMP4BQ9H444 224 aaKnown RBP11.39□□□□□ -0.59
NLRP3-204ENST00000366497 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
NLRP3-204ENST00000366497 DISP1Q96F81 1524 aa11.38□□□□□ -0.59
NLRP3-204ENST00000366497 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
NLRP3-204ENST00000366497 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
NLRP3-204ENST00000366497 SMC4Q9NTJ3 1288 aa11.38□□□□□ -0.59
NLRP3-204ENST00000366497 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
NLRP3-204ENST00000366497 E9PSI1 815 aa11.37□□□□□ -0.59
NLRP3-204ENST00000366497 NGDNQ8NEJ9 315 aaKnown RBP11.37□□□□□ -0.59
NLRP3-204ENST00000366497 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
NLRP3-204ENST00000366497 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
NLRP3-204ENST00000366497 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
NLRP3-204ENST00000366497 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
NLRP3-204ENST00000366497 CALD1Q05682 793 aaKnown RBP11.36□□□□□ -0.59
NLRP3-204ENST00000366497 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
NLRP3-204ENST00000366497 SLC12A5Q9H2X9 1139 aa11.36□□□□□ -0.59
NLRP3-204ENST00000366497 CRBNQ96SW2 442 aa11.36□□□□□ -0.59
NLRP3-204ENST00000366497 ERBINQ96RT1 1412 aa11.36□□□□□ -0.59
NLRP3-204ENST00000366497 A0A0G2JS52 829 aa11.35□□□□□ -0.59
NLRP3-204ENST00000366497 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
NLRP3-204ENST00000366497 CD109Q6YHK3 1445 aa11.34□□□□□ -0.59
NLRP3-204ENST00000366497 ARXQ96QS3 562 aa11.34□□□□□ -0.59
NLRP3-204ENST00000366497 NUP160Q12769 1436 aa11.34□□□□□ -0.59
NLRP3-204ENST00000366497 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms