RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 PCDHGA10Q9Y5H3 936 aa6.12□□□□□ -1.43
MIR539-201ENST00000365690 ZNF787Q6DD87 383 aa6.11□□□□□ -1.43
MIR539-201ENST00000365690 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
MIR539-201ENST00000365690 NCKAP5LQ9HCH0 1330 aa6.1□□□□□ -1.43
MIR539-201ENST00000365690 PRKD2Q9BZL6 878 aa6.1□□□□□ -1.43
MIR539-201ENST00000365690 SEPT9Q9UHD8 586 aaPredicted RBP6.09□□□□□ -1.43
MIR539-201ENST00000365690 TJAP1Q5JTD0 557 aa6.07□□□□□ -1.44
MIR539-201ENST00000365690 TSR3Q9UJK0 312 aaKnown RBP6.06□□□□□ -1.44
MIR539-201ENST00000365690 HPS5Q9UPZ3 1129 aa6.06□□□□□ -1.44
MIR539-201ENST00000365690 NKX1-1Q15270 411 aaPredicted RBP6.05□□□□□ -1.44
MIR539-201ENST00000365690 EMILIN3Q9NT22 766 aa6.05□□□□□ -1.44
MIR539-201ENST00000365690 ONECUT3O60422 494 aaPredicted RBP6.04□□□□□ -1.44
MIR539-201ENST00000365690 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
MIR539-201ENST00000365690 HS6ST3Q8IZP7 471 aa6.04□□□□□ -1.44
MIR539-201ENST00000365690 V9GY48 417 aaPredicted RBP6.04□□□□□ -1.44
MIR539-201ENST00000365690 POTECB2RU33 542 aa6.03□□□□□ -1.44
MIR539-201ENST00000365690 FAM98CQ17RN3 349 aaKnown RBP6.03□□□□□ -1.44
MIR539-201ENST00000365690 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
MIR539-201ENST00000365690 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.03□□□□□ -1.44
MIR539-201ENST00000365690 TRIM6-TRIM34B2RNG4 842 aa6.02□□□□□ -1.45
MIR539-201ENST00000365690 TYW1BQ6NUM6 668 aa6.02□□□□□ -1.45
MIR539-201ENST00000365690 LRCH3Q96II8 777 aa6.01□□□□□ -1.45
MIR539-201ENST00000365690 PDZRN3Q9UPQ7 1066 aa6.01□□□□□ -1.45
MIR539-201ENST00000365690 PHF14O94880 888 aa6□□□□□ -1.45
MIR539-201ENST00000365690 MAP3K9P80192 1104 aa6□□□□□ -1.45
MIR539-201ENST00000365690 C6orf132Q5T0Z8 1188 aa6□□□□□ -1.45
MIR539-201ENST00000365690 TRIM67Q6ZTA4 783 aa6□□□□□ -1.45
MIR539-201ENST00000365690 ZNF516Q92618 1163 aa6□□□□□ -1.45
MIR539-201ENST00000365690 PDE4AP27815 886 aa5.99□□□□□ -1.45
MIR539-201ENST00000365690 FBXW7Q969H0 707 aa5.99□□□□□ -1.45
MIR539-201ENST00000365690 MTRQ99707 1265 aa5.99□□□□□ -1.45
MIR539-201ENST00000365690 MFSD10Q14728 455 aa5.98□□□□□ -1.45
MIR539-201ENST00000365690 NKX2-3Q8TAU0 364 aa5.98□□□□□ -1.45
MIR539-201ENST00000365690 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.98□□□□□ -1.45
MIR539-201ENST00000365690 C3orf80F5H4A9 247 aa5.97□□□□□ -1.45
MIR539-201ENST00000365690 EMID1Q96A84 441 aaPredicted RBP5.97□□□□□ -1.45
MIR539-201ENST00000365690 LARP6Q9BRS8 491 aaKnown RBP5.97□□□□□ -1.45
MIR539-201ENST00000365690 DNAJC5Q9H3Z4 198 aa5.97□□□□□ -1.45
MIR539-201ENST00000365690 TSKSQ9UJT2 592 aa5.97□□□□□ -1.45
MIR539-201ENST00000365690 IL21Q9HBE4 155 aa5.96□□□□□ -1.46
MIR539-201ENST00000365690 PPP4CP60510 307 aa5.95□□□□□ -1.46
MIR539-201ENST00000365690 MYT1Q01538 1121 aa5.95□□□□□ -1.46
MIR539-201ENST00000365690 DDX27Q96GQ7 796 aaKnown RBP5.95□□□□□ -1.46
MIR539-201ENST00000365690 SAMD7Q7Z3H4 446 aa5.94□□□□□ -1.46
MIR539-201ENST00000365690 FAM198AQ9UFP1 575 aa5.94□□□□□ -1.46
MIR539-201ENST00000365690 SMAPO00193 183 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 CHGAP10645 457 aaKnown RBP5.92□□□□□ -1.46
MIR539-201ENST00000365690 APLP1P51693 650 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 TREML4Q6UXN2 200 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 RBM33Q96EV2 1170 aaKnown RBP5.92□□□□□ -1.46
MIR539-201ENST00000365690 EPAS1Q99814 870 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 TSR1Q2NL82 804 aaKnown RBP5.9□□□□□ -1.46
MIR539-201ENST00000365690 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
MIR539-201ENST00000365690 GTPBP6O43824 516 aaPredicted RBP5.88□□□□□ -1.47
MIR539-201ENST00000365690 PACS2Q86VP3 889 aa5.88□□□□□ -1.47
MIR539-201ENST00000365690 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
MIR539-201ENST00000365690 DGAT1O75907 488 aa5.87□□□□□ -1.47
MIR539-201ENST00000365690 CADPS2Q86UW7 1296 aa5.87□□□□□ -1.47
MIR539-201ENST00000365690 DDX12PQ92771 950 aa5.87□□□□□ -1.47
MIR539-201ENST00000365690 DPYSL4O14531 572 aa5.86□□□□□ -1.47
MIR539-201ENST00000365690 PRIM1P49642 420 aaKnown RBP5.86□□□□□ -1.47
MIR539-201ENST00000365690 CAMK2BQ13554 666 aa5.86□□□□□ -1.47
MIR539-201ENST00000365690 ST8SIA5O15466 376 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 EN1Q05925 392 aaPredicted RBP5.85□□□□□ -1.47
MIR539-201ENST00000365690 PKDCCQ504Y2 493 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 CDCA7LQ96GN5 454 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 TMUB1Q9BVT8 246 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 RNF223E7ERA6 249 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 SLC19A1P41440 591 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 COPS2P61201 443 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20EP86478 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20CP86479 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20DP86480 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20BP86481 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20AP86496 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 SPRYD7Q5W111 196 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 TATDN2Q93075 761 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 RYDENQ9NUL5 291 aaKnown RBP5.84□□□□□ -1.47
MIR539-201ENST00000365690 GDF9O60383 454 aa5.83□□□□□ -1.48
MIR539-201ENST00000365690 PRSS12P56730 875 aa5.83□□□□□ -1.48
MIR539-201ENST00000365690 AAASQ9NRG9 546 aa5.83□□□□□ -1.48
MIR539-201ENST00000365690 ZPR1O75312 459 aa5.82□□□□□ -1.48
MIR539-201ENST00000365690 LIAT1Q6ZQX7 453 aa5.82□□□□□ -1.48
MIR539-201ENST00000365690 ZNF598Q86UK7 904 aaKnown RBP5.82□□□□□ -1.48
MIR539-201ENST00000365690 DACH1Q9UI36 760 aa5.82□□□□□ -1.48
MIR539-201ENST00000365690 PNMA3Q9UL41 463 aa5.81□□□□□ -1.48
MIR539-201ENST00000365690 FAM187AA6NFU0 413 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 MAP3K7O43318 606 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 GGCXP38435 758 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 NFX1Q12986 1120 aaKnown RBP5.8□□□□□ -1.48
MIR539-201ENST00000365690 NBR1Q14596 966 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 TNFRSF10AO00220 468 aa5.79□□□□□ -1.48
MIR539-201ENST00000365690 PPEF1O14829 653 aaPredicted RBP5.79□□□□□ -1.48
MIR539-201ENST00000365690 STK17AQ9UEE5 414 aa5.79□□□□□ -1.48
MIR539-201ENST00000365690 WIPF1O43516 503 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 RNF40O75150 1001 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 WFS1O76024 890 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 NUDT18Q6ZVK8 323 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 NBPF26B4DH59 902 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms