RNA–Protein interactions for RNA: ENST00000365668.1

RNU4-2-201, Transcript of RNA, U4 small nuclear 2, humanhuman

BASIC

Gene RNU4-2, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-2-201ENST00000365668 HAP1P54257 671 aaPredicted RBP8.88□□□□□ -0.99
RNU4-2-201ENST00000365668 ABCC2Q92887 1545 aa8.87□□□□□ -0.99
RNU4-2-201ENST00000365668 DPY19L2Q6NUT2 758 aa8.87□□□□□ -0.99
RNU4-2-201ENST00000365668 KLHL34Q8N239 644 aa8.87□□□□□ -0.99
RNU4-2-201ENST00000365668 PLB1Q6P1J6 1458 aa8.87□□□□□ -0.99
RNU4-2-201ENST00000365668 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
RNU4-2-201ENST00000365668 FMN1Q68DA7 1419 aa8.84□□□□□ -0.99
RNU4-2-201ENST00000365668 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
RNU4-2-201ENST00000365668 ABCC10Q5T3U5 1492 aa8.83□□□□□ -1
RNU4-2-201ENST00000365668 FHOD3Q2V2M9 1422 aa8.83□□□□□ -1
RNU4-2-201ENST00000365668 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
RNU4-2-201ENST00000365668 BOLA1Q9Y3E2 137 aa8.83□□□□□ -1
RNU4-2-201ENST00000365668 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
RNU4-2-201ENST00000365668 PDAP1Q13442 181 aaKnown RBP8.82□□□□□ -1
RNU4-2-201ENST00000365668 KIF21BO75037 1637 aa8.82□□□□□ -1
RNU4-2-201ENST00000365668 KDM5BQ9UGL1 1544 aa8.81□□□□□ -1
RNU4-2-201ENST00000365668 KIAA0556O60303 1618 aa8.81□□□□□ -1
RNU4-2-201ENST00000365668 G3V3G9 751 aa8.81□□□□□ -1
RNU4-2-201ENST00000365668 ZNF710Q8N1W2 664 aa8.81□□□□□ -1
RNU4-2-201ENST00000365668 CLIP1P30622 1438 aa8.8□□□□□ -1
RNU4-2-201ENST00000365668 MAPKBP1O60336 1514 aa8.8□□□□□ -1
RNU4-2-201ENST00000365668 ERBB3P21860 1342 aa8.8□□□□□ -1
RNU4-2-201ENST00000365668 ATP10BO94823 1461 aa8.79□□□□□ -1
RNU4-2-201ENST00000365668 CABP2Q9NPB3 220 aa8.79□□□□□ -1
RNU4-2-201ENST00000365668 EFCAB5A4FU69 1503 aa8.79□□□□□ -1
RNU4-2-201ENST00000365668 VASPP50552 380 aaPredicted RBP8.78□□□□□ -1
RNU4-2-201ENST00000365668 DOK7Q18PE1 504 aa8.78□□□□□ -1
RNU4-2-201ENST00000365668 CD109Q6YHK3 1445 aa8.78□□□□□ -1
RNU4-2-201ENST00000365668 WDR7Q9Y4E6 1490 aa8.77□□□□□ -1
RNU4-2-201ENST00000365668 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
RNU4-2-201ENST00000365668 TPRNQ4KMQ1 711 aa8.76□□□□□ -1.01
RNU4-2-201ENST00000365668 RNF166Q96A37 237 aaPredicted RBP8.76□□□□□ -1.01
RNU4-2-201ENST00000365668 ARHGAP35Q9NRY4 1499 aa8.76□□□□□ -1.01
RNU4-2-201ENST00000365668 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
RNU4-2-201ENST00000365668 EPRSP07814 1512 aaKnown RBP8.75□□□□□ -1.01
RNU4-2-201ENST00000365668 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
RNU4-2-201ENST00000365668 TEX14Q8IWB6 1497 aa8.74□□□□□ -1.01
RNU4-2-201ENST00000365668 ABCA8O94911 1581 aa8.73□□□□□ -1.01
RNU4-2-201ENST00000365668 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
RNU4-2-201ENST00000365668 NUP153P49790 1475 aaKnown RBP8.72□□□□□ -1.01
RNU4-2-201ENST00000365668 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
RNU4-2-201ENST00000365668 VARS2Q5ST30 1063 aaKnown RBP8.72□□□□□ -1.01
RNU4-2-201ENST00000365668 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
RNU4-2-201ENST00000365668 CEP162Q5TB80 1403 aa8.71□□□□□ -1.01
RNU4-2-201ENST00000365668 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.01
RNU4-2-201ENST00000365668 SAMD9Q5K651 1589 aa8.71□□□□□ -1.02
RNU4-2-201ENST00000365668 MYT1LQ9UL68 1186 aa8.71□□□□□ -1.02
RNU4-2-201ENST00000365668 MTUS2Q5JR59 1369 aa8.69□□□□□ -1.02
RNU4-2-201ENST00000365668 GLI2P10070 1586 aa8.69□□□□□ -1.02
RNU4-2-201ENST00000365668 CTTNBP2Q8WZ74 1663 aa8.69□□□□□ -1.02
RNU4-2-201ENST00000365668 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
RNU4-2-201ENST00000365668 CFDP1Q9UEE9 299 aaPredicted RBP8.68□□□□□ -1.02
RNU4-2-201ENST00000365668 CIZ1Q9ULV3 898 aaPredicted RBP8.68□□□□□ -1.02
RNU4-2-201ENST00000365668 MAGI3Q5TCQ9 1506 aa8.68□□□□□ -1.02
RNU4-2-201ENST00000365668 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
RNU4-2-201ENST00000365668 TROQ12816 1431 aaPredicted RBP8.67□□□□□ -1.02
RNU4-2-201ENST00000365668 CCDC18Q5T9S5 1454 aa8.67□□□□□ -1.02
RNU4-2-201ENST00000365668 ZSWIM6Q9HCJ5 1215 aa8.67□□□□□ -1.02
RNU4-2-201ENST00000365668 ZNF777Q9ULD5 760 aaPredicted RBP8.67□□□□□ -1.02
RNU4-2-201ENST00000365668 RAPGEF6Q8TEU7 1601 aa8.66□□□□□ -1.02
RNU4-2-201ENST00000365668 DIP2BQ9P265 1576 aa8.66□□□□□ -1.02
RNU4-2-201ENST00000365668 SPOCK2Q92563 424 aa8.66□□□□□ -1.02
RNU4-2-201ENST00000365668 PLCH2O75038 1416 aa8.65□□□□□ -1.02
RNU4-2-201ENST00000365668 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
RNU4-2-201ENST00000365668 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 ARID4BQ4LE39 1312 aaPredicted RBP8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 RSPH4AQ5TD94 716 aa8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 TMEM92Q6UXU6 159 aa8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 ZCCHC11Q5TAX3 1644 aaKnown RBP8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 NEO1Q92859 1461 aa8.64□□□□□ -1.03
RNU4-2-201ENST00000365668 GPR153Q6NV75 609 aa8.63□□□□□ -1.03
RNU4-2-201ENST00000365668 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
RNU4-2-201ENST00000365668 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
RNU4-2-201ENST00000365668 PTGER2P43116 358 aa8.62□□□□□ -1.03
RNU4-2-201ENST00000365668 MICALL2Q8IY33 904 aa8.62□□□□□ -1.03
RNU4-2-201ENST00000365668 CDK13Q14004 1512 aaKnown RBP8.62□□□□□ -1.03
RNU4-2-201ENST00000365668 HECW1Q76N89 1606 aa8.62□□□□□ -1.03
RNU4-2-201ENST00000365668 IFNLR1Q8IU57 520 aaPredicted RBP8.61□□□□□ -1.03
RNU4-2-201ENST00000365668 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
RNU4-2-201ENST00000365668 FANCAO15360 1455 aa8.61□□□□□ -1.03
RNU4-2-201ENST00000365668 DENND4BO75064 1496 aaPredicted RBP8.61□□□□□ -1.03
RNU4-2-201ENST00000365668 SCAPERQ9BY12 1400 aa8.61□□□□□ -1.03
RNU4-2-201ENST00000365668 TSPY4P0CV99 314 aa8.6□□□□□ -1.03
RNU4-2-201ENST00000365668 TSPY10P0CW01 314 aa8.6□□□□□ -1.03
RNU4-2-201ENST00000365668 ARAP3Q8WWN8 1544 aa8.59□□□□□ -1.03
RNU4-2-201ENST00000365668 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
RNU4-2-201ENST00000365668 ARXQ96QS3 562 aa8.59□□□□□ -1.03
RNU4-2-201ENST00000365668 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
RNU4-2-201ENST00000365668 HNRNPMP52272 730 aaKnown RBP eCLIP8.58□□□□□ -1.04
RNU4-2-201ENST00000365668 KANK4Q5T7N3 995 aaPredicted RBP8.58□□□□□ -1.04
RNU4-2-201ENST00000365668 ANKRD13DQ6ZTN6 518 aa8.58□□□□□ -1.04
RNU4-2-201ENST00000365668 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
RNU4-2-201ENST00000365668 KDM6BO15054 1643 aa8.57□□□□□ -1.04
RNU4-2-201ENST00000365668 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
RNU4-2-201ENST00000365668 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
RNU4-2-201ENST00000365668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.56□□□□□ -1.04not detected■■■■■ 65.5
RNU4-2-201ENST00000365668 SOX12O15370 315 aa8.56□□□□□ -1.04
RNU4-2-201ENST00000365668 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
RNU4-2-201ENST00000365668 KDM4FA0A1W2PPD8 638 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms