RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 GFRA3O60609 400 aa6□□□□□ -1.45
RNU4-11P-201ENST00000365287 PDE4AP27815 886 aa6□□□□□ -1.45
RNU4-11P-201ENST00000365287 DNAJC5Q9H3Z4 198 aa6□□□□□ -1.45
RNU4-11P-201ENST00000365287 COL9A1P20849 921 aa5.99□□□□□ -1.45
RNU4-11P-201ENST00000365287 TYW1BQ6NUM6 668 aa5.99□□□□□ -1.45
RNU4-11P-201ENST00000365287 PCDHGA10Q9Y5H3 936 aa5.99□□□□□ -1.45
RNU4-11P-201ENST00000365287 NCKAP5LQ9HCH0 1330 aa5.99□□□□□ -1.45
RNU4-11P-201ENST00000365287 NRG2O14511 850 aaPredicted RBP5.98□□□□□ -1.45
RNU4-11P-201ENST00000365287 MAP3K9P80192 1104 aa5.98□□□□□ -1.45
RNU4-11P-201ENST00000365287 FAM98CQ17RN3 349 aaKnown RBP5.97□□□□□ -1.45
RNU4-11P-201ENST00000365287 KIAA1468Q9P260 1216 aa5.97□□□□□ -1.45
RNU4-11P-201ENST00000365287 TSR3Q9UJK0 312 aaKnown RBP5.97□□□□□ -1.45
RNU4-11P-201ENST00000365287 PHF14O94880 888 aa5.96□□□□□ -1.46
RNU4-11P-201ENST00000365287 DDX27Q96GQ7 796 aaKnown RBP5.96□□□□□ -1.46
RNU4-11P-201ENST00000365287 LRCH3Q96II8 777 aa5.96□□□□□ -1.46
RNU4-11P-201ENST00000365287 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.96□□□□□ -1.46
RNU4-11P-201ENST00000365287 CHGAP10645 457 aaKnown RBP5.95□□□□□ -1.46
RNU4-11P-201ENST00000365287 HPS5Q9UPZ3 1129 aa5.95□□□□□ -1.46
RNU4-11P-201ENST00000365287 MFSD10Q14728 455 aa5.94□□□□□ -1.46
RNU4-11P-201ENST00000365287 NKX1-1Q15270 411 aaPredicted RBP5.94□□□□□ -1.46
RNU4-11P-201ENST00000365287 SEPT9Q9UHD8 586 aaPredicted RBP5.94□□□□□ -1.46
RNU4-11P-201ENST00000365287 V9GY48 417 aaPredicted RBP5.94□□□□□ -1.46
RNU4-11P-201ENST00000365287 TRIM6-TRIM34B2RNG4 842 aa5.93□□□□□ -1.46
RNU4-11P-201ENST00000365287 EPAS1Q99814 870 aa5.93□□□□□ -1.46
RNU4-11P-201ENST00000365287 LARP6Q9BRS8 491 aaKnown RBP5.93□□□□□ -1.46
RNU4-11P-201ENST00000365287 PRKD2Q9BZL6 878 aa5.93□□□□□ -1.46
RNU4-11P-201ENST00000365287 TJAP1Q5JTD0 557 aa5.91□□□□□ -1.46
RNU4-11P-201ENST00000365287 C6orf132Q5T0Z8 1188 aa5.91□□□□□ -1.46
RNU4-11P-201ENST00000365287 EMILIN3Q9NT22 766 aa5.91□□□□□ -1.46
RNU4-11P-201ENST00000365287 ZNF787Q6DD87 383 aa5.9□□□□□ -1.46
RNU4-11P-201ENST00000365287 IL21Q9HBE4 155 aa5.89□□□□□ -1.47
RNU4-11P-201ENST00000365287 PPP4CP60510 307 aa5.88□□□□□ -1.47
RNU4-11P-201ENST00000365287 PPP1R18Q6NYC8 613 aa5.87□□□□□ -1.47
RNU4-11P-201ENST00000365287 PACS2Q86VP3 889 aa5.87□□□□□ -1.47
RNU4-11P-201ENST00000365287 PDZRN3Q9UPQ7 1066 aa5.87□□□□□ -1.47
RNU4-11P-201ENST00000365287 ZNF775Q96BV0 537 aaPredicted RBP5.86□□□□□ -1.47
RNU4-11P-201ENST00000365287 MTRQ99707 1265 aa5.86□□□□□ -1.47
RNU4-11P-201ENST00000365287 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.85□□□□□ -1.47
RNU4-11P-201ENST00000365287 TSKSQ9UJT2 592 aa5.84□□□□□ -1.47
RNU4-11P-201ENST00000365287 GGCXP38435 758 aa5.83□□□□□ -1.48
RNU4-11P-201ENST00000365287 GTPBP6O43824 516 aaPredicted RBP5.82□□□□□ -1.48
RNU4-11P-201ENST00000365287 CAMK2BQ13554 666 aa5.82□□□□□ -1.48
RNU4-11P-201ENST00000365287 SAMD7Q7Z3H4 446 aa5.82□□□□□ -1.48
RNU4-11P-201ENST00000365287 RBM33Q96EV2 1170 aaKnown RBP5.82□□□□□ -1.48
RNU4-11P-201ENST00000365287 EN1Q05925 392 aaPredicted RBP5.81□□□□□ -1.48
RNU4-11P-201ENST00000365287 DPYSL4O14531 572 aa5.8□□□□□ -1.48
RNU4-11P-201ENST00000365287 ZNF516Q92618 1163 aa5.8□□□□□ -1.48
RNU4-11P-201ENST00000365287 NECTIN2Q92692 538 aa5.8□□□□□ -1.48
RNU4-11P-201ENST00000365287 TMUB1Q9BVT8 246 aa5.8□□□□□ -1.48
RNU4-11P-201ENST00000365287 NBPF26B4DH59 902 aa5.79□□□□□ -1.48
RNU4-11P-201ENST00000365287 MAP3K7O43318 606 aa5.79□□□□□ -1.48
RNU4-11P-201ENST00000365287 CERKQ8TCT0 537 aa5.78□□□□□ -1.48
RNU4-11P-201ENST00000365287 DDX12PQ92771 950 aa5.78□□□□□ -1.48
RNU4-11P-201ENST00000365287 CDCA7LQ96GN5 454 aa5.78□□□□□ -1.48
RNU4-11P-201ENST00000365287 SMAPO00193 183 aa5.77□□□□□ -1.49
RNU4-11P-201ENST00000365287 APLP1P51693 650 aa5.77□□□□□ -1.49
RNU4-11P-201ENST00000365287 PRSS12P56730 875 aa5.77□□□□□ -1.49
RNU4-11P-201ENST00000365287 NBR1Q14596 966 aa5.77□□□□□ -1.49
RNU4-11P-201ENST00000365287 TSR1Q2NL82 804 aaKnown RBP5.77□□□□□ -1.49
RNU4-11P-201ENST00000365287 DGAT1O75907 488 aa5.76□□□□□ -1.49
RNU4-11P-201ENST00000365287 HDGFP51858 240 aaKnown RBP5.76□□□□□ -1.49
RNU4-11P-201ENST00000365287 PKDCCQ504Y2 493 aa5.76□□□□□ -1.49
RNU4-11P-201ENST00000365287 RNF40O75150 1001 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 PRR20EP86478 221 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 PRR20CP86479 221 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 PRR20DP86480 221 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 PRR20BP86481 221 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 PRR20AP86496 221 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 MYT1Q01538 1121 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 PDIA6Q15084 440 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 TRIM67Q6ZTA4 783 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 NKX2-3Q8TAU0 364 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 TATDN2Q93075 761 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 FAM198AQ9UFP1 575 aa5.75□□□□□ -1.49
RNU4-11P-201ENST00000365287 CADPS2Q86UW7 1296 aa5.74□□□□□ -1.49
RNU4-11P-201ENST00000365287 RBM27Q9P2N5 1060 aaKnown RBP5.74□□□□□ -1.49
RNU4-11P-201ENST00000365287 PNMA3Q9UL41 463 aa5.74□□□□□ -1.49
RNU4-11P-201ENST00000365287 SPDYE16A6NNV3 312 aaPredicted RBP5.73□□□□□ -1.49
RNU4-11P-201ENST00000365287 ZPR1O75312 459 aa5.72□□□□□ -1.49
RNU4-11P-201ENST00000365287 SLC19A1P41440 591 aa5.72□□□□□ -1.49
RNU4-11P-201ENST00000365287 COPS2P61201 443 aa5.72□□□□□ -1.49
RNU4-11P-201ENST00000365287 TREML4Q6UXN2 200 aa5.72□□□□□ -1.49
RNU4-11P-201ENST00000365287 SLF2Q8IX21 1173 aa5.72□□□□□ -1.49
RNU4-11P-201ENST00000365287 C3orf80F5H4A9 247 aa5.71□□□□□ -1.5
RNU4-11P-201ENST00000365287 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
RNU4-11P-201ENST00000365287 ZNF598Q86UK7 904 aaKnown RBP5.71□□□□□ -1.5
RNU4-11P-201ENST00000365287 PRR14Q9BWN1 585 aa5.71□□□□□ -1.5
RNU4-11P-201ENST00000365287 POTECB2RU33 542 aa5.7□□□□□ -1.5
RNU4-11P-201ENST00000365287 RNF223E7ERA6 249 aa5.7□□□□□ -1.5
RNU4-11P-201ENST00000365287 SLC4A3P48751 1232 aa5.7□□□□□ -1.5
RNU4-11P-201ENST00000365287 SPRYD7Q5W111 196 aa5.7□□□□□ -1.5
RNU4-11P-201ENST00000365287 NUDT18Q6ZVK8 323 aa5.69□□□□□ -1.5
RNU4-11P-201ENST00000365287 ANKLE1Q8NAG6 615 aa5.69□□□□□ -1.5
RNU4-11P-201ENST00000365287 EMID1Q96A84 441 aaPredicted RBP5.69□□□□□ -1.5
RNU4-11P-201ENST00000365287 FAM187AA6NFU0 413 aa5.68□□□□□ -1.5
RNU4-11P-201ENST00000365287 SWT1Q5T5J6 900 aaKnown RBP5.68□□□□□ -1.5
RNU4-11P-201ENST00000365287 ZNF697Q5TEC3 545 aa5.67□□□□□ -1.5
RNU4-11P-201ENST00000365287 STK17AQ9UEE5 414 aa5.67□□□□□ -1.5
RNU4-11P-201ENST00000365287 PCDHB3Q9Y5E6 796 aa5.67□□□□□ -1.5
RNU4-11P-201ENST00000365287 TTC13Q8NBP0 860 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms