RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 COL9A1P20849 921 aa7.17□□□□□ -1.26
RNU4-42P-201ENST00000364738 DDX12PQ92771 950 aa7.17□□□□□ -1.26
RNU4-42P-201ENST00000364738 EPAS1Q99814 870 aa7.17□□□□□ -1.26
RNU4-42P-201ENST00000364738 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
RNU4-42P-201ENST00000364738 BHMG1C9JSJ3 638 aaPredicted RBP7.16□□□□□ -1.26
RNU4-42P-201ENST00000364738 PDIA6Q15084 440 aa7.16□□□□□ -1.26
RNU4-42P-201ENST00000364738 PROX2Q3B8N5 592 aa7.16□□□□□ -1.26
RNU4-42P-201ENST00000364738 PTPN5P54829 565 aa7.15□□□□□ -1.26
RNU4-42P-201ENST00000364738 E2F4Q16254 413 aa7.15□□□□□ -1.26
RNU4-42P-201ENST00000364738 RBM33Q96EV2 1170 aaKnown RBP7.15□□□□□ -1.26
RNU4-42P-201ENST00000364738 WDR70Q9NW82 654 aa7.15□□□□□ -1.26
RNU4-42P-201ENST00000364738 NBR1Q14596 966 aa7.14□□□□□ -1.27
RNU4-42P-201ENST00000364738 C6orf132Q5T0Z8 1188 aa7.14□□□□□ -1.27
RNU4-42P-201ENST00000364738 WNT2BQ93097 391 aa7.14□□□□□ -1.27
RNU4-42P-201ENST00000364738 RABGEF1Q9UJ41 708 aa7.14□□□□□ -1.27
RNU4-42P-201ENST00000364738 SPDYE16A6NNV3 312 aaPredicted RBP7.13□□□□□ -1.27
RNU4-42P-201ENST00000364738 THSD4Q6ZMP0 1018 aa7.13□□□□□ -1.27
RNU4-42P-201ENST00000364738 MAP3K7O43318 606 aa7.11□□□□□ -1.27
RNU4-42P-201ENST00000364738 EN1Q05925 392 aaPredicted RBP7.11□□□□□ -1.27
RNU4-42P-201ENST00000364738 ANKK1Q8NFD2 765 aa7.1□□□□□ -1.27
RNU4-42P-201ENST00000364738 KIAA1468Q9P260 1216 aa7.1□□□□□ -1.27
RNU4-42P-201ENST00000364738 TSR1Q2NL82 804 aaKnown RBP7.09□□□□□ -1.27
RNU4-42P-201ENST00000364738 ARIH1Q9Y4X5 557 aaPredicted RBP7.09□□□□□ -1.27
RNU4-42P-201ENST00000364738 TRIM6-TRIM34B2RNG4 842 aa7.08□□□□□ -1.28
RNU4-42P-201ENST00000364738 LAPTM4BQ86VI4 370 aa7.08□□□□□ -1.28
RNU4-42P-201ENST00000364738 SEPT9Q9UHD8 586 aaPredicted RBP7.08□□□□□ -1.28
RNU4-42P-201ENST00000364738 GRXCR2A6NFK2 248 aa7.07□□□□□ -1.28
RNU4-42P-201ENST00000364738 ONECUT3O60422 494 aaPredicted RBP7.07□□□□□ -1.28
RNU4-42P-201ENST00000364738 BCAMP50895 628 aa7.06□□□□□ -1.28
RNU4-42P-201ENST00000364738 ZFRQ96KR1 1074 aaKnown RBP7.06□□□□□ -1.28
RNU4-42P-201ENST00000364738 TSHZ2Q9NRE2 1034 aa7.05□□□□□ -1.28
RNU4-42P-201ENST00000364738 PRIM1P49642 420 aaKnown RBP7.04□□□□□ -1.28
RNU4-42P-201ENST00000364738 FAM98CQ17RN3 349 aaKnown RBP7.04□□□□□ -1.28
RNU4-42P-201ENST00000364738 SOWAHBA6NEL2 793 aa7.03□□□□□ -1.28
RNU4-42P-201ENST00000364738 PACS2Q86VP3 889 aa7.03□□□□□ -1.28
RNU4-42P-201ENST00000364738 TSKSQ9UJT2 592 aa7.03□□□□□ -1.28
RNU4-42P-201ENST00000364738 CERKQ8TCT0 537 aa7.02□□□□□ -1.29
RNU4-42P-201ENST00000364738 CDCA7LQ96GN5 454 aa7.02□□□□□ -1.29
RNU4-42P-201ENST00000364738 OSBPP22059 807 aa7.01□□□□□ -1.29
RNU4-42P-201ENST00000364738 PRSS12P56730 875 aa7.01□□□□□ -1.29
RNU4-42P-201ENST00000364738 LRCH3Q96II8 777 aa7.01□□□□□ -1.29
RNU4-42P-201ENST00000364738 CDHR5Q9HBB8 845 aa7.01□□□□□ -1.29
RNU4-42P-201ENST00000364738 KCNV2Q8TDN2 545 aa7□□□□□ -1.29
RNU4-42P-201ENST00000364738 WBP1LQ9NX94 342 aa7□□□□□ -1.29
RNU4-42P-201ENST00000364738 CDKN2AIPQ9NXV6 580 aaPredicted RBP7□□□□□ -1.29
RNU4-42P-201ENST00000364738 SMAPO00193 183 aa6.99□□□□□ -1.29
RNU4-42P-201ENST00000364738 IFFO2Q5TF58 517 aa6.99□□□□□ -1.29
RNU4-42P-201ENST00000364738 NYAP1Q6ZVC0 841 aa6.99□□□□□ -1.29
RNU4-42P-201ENST00000364738 HPS5Q9UPZ3 1129 aa6.99□□□□□ -1.29
RNU4-42P-201ENST00000364738 NBPF26B4DH59 902 aa6.98□□□□□ -1.29
RNU4-42P-201ENST00000364738 ARHGEF1Q92888 912 aaKnown RBP6.98□□□□□ -1.29
RNU4-42P-201ENST00000364738 FAM198AQ9UFP1 575 aa6.98□□□□□ -1.29
RNU4-42P-201ENST00000364738 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
RNU4-42P-201ENST00000364738 A0A0G2JS52 829 aa6.96□□□□□ -1.3
RNU4-42P-201ENST00000364738 ITGBL1O95965 494 aaPredicted RBP6.96□□□□□ -1.3
RNU4-42P-201ENST00000364738 TATDN2Q93075 761 aa6.96□□□□□ -1.3
RNU4-42P-201ENST00000364738 RBM27Q9P2N5 1060 aaKnown RBP6.96□□□□□ -1.3
RNU4-42P-201ENST00000364738 PNMA3Q9UL41 463 aa6.96□□□□□ -1.3
RNU4-42P-201ENST00000364738 C3orf80F5H4A9 247 aa6.95□□□□□ -1.3
RNU4-42P-201ENST00000364738 MLLT3P42568 568 aaPredicted RBP6.95□□□□□ -1.3
RNU4-42P-201ENST00000364738 SAMD7Q7Z3H4 446 aa6.95□□□□□ -1.3
RNU4-42P-201ENST00000364738 P3H3Q8IVL6 736 aa6.94□□□□□ -1.3
RNU4-42P-201ENST00000364738 PPP4CP60510 307 aa6.93□□□□□ -1.3
RNU4-42P-201ENST00000364738 PADI6Q6TGC4 694 aa6.93□□□□□ -1.3
RNU4-42P-201ENST00000364738 NUDT18Q6ZVK8 323 aa6.93□□□□□ -1.3
RNU4-42P-201ENST00000364738 RNF40O75150 1001 aa6.92□□□□□ -1.3
RNU4-42P-201ENST00000364738 KCNC4Q03721 635 aa6.92□□□□□ -1.3
RNU4-42P-201ENST00000364738 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
RNU4-42P-201ENST00000364738 RGS20O76081 388 aa6.91□□□□□ -1.3
RNU4-42P-201ENST00000364738 PLCB2Q00722 1185 aa6.91□□□□□ -1.3
RNU4-42P-201ENST00000364738 TTC13Q8NBP0 860 aa6.91□□□□□ -1.3
RNU4-42P-201ENST00000364738 HDGFP51858 240 aaKnown RBP6.9□□□□□ -1.3
RNU4-42P-201ENST00000364738 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
RNU4-42P-201ENST00000364738 PTGDRQ13258 359 aa6.87□□□□□ -1.31
RNU4-42P-201ENST00000364738 SWT1Q5T5J6 900 aaKnown RBP6.87□□□□□ -1.31
RNU4-42P-201ENST00000364738 SEMA3EO15041 775 aa6.86□□□□□ -1.31
RNU4-42P-201ENST00000364738 SLF2Q8IX21 1173 aa6.86□□□□□ -1.31
RNU4-42P-201ENST00000364738 NECTIN2Q92692 538 aa6.86□□□□□ -1.31
RNU4-42P-201ENST00000364738 SLC4A3P48751 1232 aa6.85□□□□□ -1.31
RNU4-42P-201ENST00000364738 MTRQ99707 1265 aa6.85□□□□□ -1.31
RNU4-42P-201ENST00000364738 APLP1P51693 650 aa6.84□□□□□ -1.31
RNU4-42P-201ENST00000364738 TJAP1Q5JTD0 557 aa6.84□□□□□ -1.31
RNU4-42P-201ENST00000364738 EYA1Q99502 592 aa6.84□□□□□ -1.31
RNU4-42P-201ENST00000364738 IRX2Q9BZI1 471 aaPredicted RBP6.84□□□□□ -1.31
RNU4-42P-201ENST00000364738 RBM46Q8TBY0 533 aaKnown RBP6.83□□□□□ -1.32
RNU4-42P-201ENST00000364738 IL21Q9HBE4 155 aa6.83□□□□□ -1.32
RNU4-42P-201ENST00000364738 ADGRG1Q9Y653 693 aa6.83□□□□□ -1.32
RNU4-42P-201ENST00000364738 FCHSD2O94868 740 aa6.82□□□□□ -1.32
RNU4-42P-201ENST00000364738 DNAJB2P25686 324 aa6.82□□□□□ -1.32
RNU4-42P-201ENST00000364738 HAP1P54257 671 aaPredicted RBP6.82□□□□□ -1.32
RNU4-42P-201ENST00000364738 FAM161AQ3B820 660 aa6.8□□□□□ -1.32
RNU4-42P-201ENST00000364738 ZNF516Q92618 1163 aa6.8□□□□□ -1.32
RNU4-42P-201ENST00000364738 TESPA1A2RU30 521 aaPredicted RBP6.79□□□□□ -1.32
RNU4-42P-201ENST00000364738 RCCD1A6NED2 376 aa6.79□□□□□ -1.32
RNU4-42P-201ENST00000364738 COPS2P61201 443 aa6.79□□□□□ -1.32
RNU4-42P-201ENST00000364738 PRR14Q9BWN1 585 aa6.79□□□□□ -1.32
RNU4-42P-201ENST00000364738 TMEM134Q9H6X4 195 aa6.79□□□□□ -1.32
RNU4-42P-201ENST00000364738 RBM26Q5T8P6 1007 aaKnown RBP6.78□□□□□ -1.32
RNU4-42P-201ENST00000364738 SMYD5Q6GMV2 418 aa6.78□□□□□ -1.32
RNU4-42P-201ENST00000364738 HIC1Q14526 733 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms