RNA–Protein interactions for RNA: ENST00000364065.1

RNU6-1090P-201, Transcript of RNA, U6 small nuclear 1090, pseudogene, humanhuman

BASIC

Gene RNU6-1090P, Length 94 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1090P-201ENST00000364065 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
RNU6-1090P-201ENST00000364065 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
RNU6-1090P-201ENST00000364065 ZBED2Q9BTP6 218 aa9.32□□□□□ -0.92
RNU6-1090P-201ENST00000364065 GOLGA8CPA6NN73 597 aa9.31□□□□□ -0.92
RNU6-1090P-201ENST00000364065 DDX12PQ92771 950 aa9.3□□□□□ -0.92
RNU6-1090P-201ENST00000364065 NBR1Q14596 966 aa9.29□□□□□ -0.92
RNU6-1090P-201ENST00000364065 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
RNU6-1090P-201ENST00000364065 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
RNU6-1090P-201ENST00000364065 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
RNU6-1090P-201ENST00000364065 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
RNU6-1090P-201ENST00000364065 RABGEF1Q9UJ41 708 aa9.27□□□□□ -0.93
RNU6-1090P-201ENST00000364065 MAP3K7O43318 606 aa9.26□□□□□ -0.93
RNU6-1090P-201ENST00000364065 ONECUT3O60422 494 aaPredicted RBP9.26□□□□□ -0.93
RNU6-1090P-201ENST00000364065 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
RNU6-1090P-201ENST00000364065 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
RNU6-1090P-201ENST00000364065 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
RNU6-1090P-201ENST00000364065 P3H3Q8IVL6 736 aa9.25□□□□□ -0.93
RNU6-1090P-201ENST00000364065 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
RNU6-1090P-201ENST00000364065 COL9A1P20849 921 aa9.23□□□□□ -0.93
RNU6-1090P-201ENST00000364065 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
RNU6-1090P-201ENST00000364065 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
RNU6-1090P-201ENST00000364065 CERKQ8TCT0 537 aa9.23□□□□□ -0.93
RNU6-1090P-201ENST00000364065 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
RNU6-1090P-201ENST00000364065 WNT2BQ93097 391 aa9.22□□□□□ -0.93
RNU6-1090P-201ENST00000364065 PROX2Q3B8N5 592 aa9.21□□□□□ -0.94
RNU6-1090P-201ENST00000364065 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
RNU6-1090P-201ENST00000364065 ANKK1Q8NFD2 765 aa9.2□□□□□ -0.94
RNU6-1090P-201ENST00000364065 PACS2Q86VP3 889 aa9.19□□□□□ -0.94
RNU6-1090P-201ENST00000364065 KIAA1468Q9P260 1216 aa9.19□□□□□ -0.94
RNU6-1090P-201ENST00000364065 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
RNU6-1090P-201ENST00000364065 PTPN5P54829 565 aa9.16□□□□□ -0.94
RNU6-1090P-201ENST00000364065 TSR1Q2NL82 804 aaKnown RBP9.16□□□□□ -0.94
RNU6-1090P-201ENST00000364065 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
RNU6-1090P-201ENST00000364065 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
RNU6-1090P-201ENST00000364065 FAM98CQ17RN3 349 aaKnown RBP9.15□□□□□ -0.94
RNU6-1090P-201ENST00000364065 OSBPP22059 807 aa9.14□□□□□ -0.95
RNU6-1090P-201ENST00000364065 PRSS12P56730 875 aa9.13□□□□□ -0.95
RNU6-1090P-201ENST00000364065 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
RNU6-1090P-201ENST00000364065 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
RNU6-1090P-201ENST00000364065 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
RNU6-1090P-201ENST00000364065 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
RNU6-1090P-201ENST00000364065 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
RNU6-1090P-201ENST00000364065 SEPT9Q9UHD8 586 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1090P-201ENST00000364065 SOWAHBA6NEL2 793 aa9.1□□□□□ -0.95
RNU6-1090P-201ENST00000364065 HAP1P54257 671 aaPredicted RBP9.09□□□□□ -0.95
RNU6-1090P-201ENST00000364065 LRCH3Q96II8 777 aa9.09□□□□□ -0.95
RNU6-1090P-201ENST00000364065 TSKSQ9UJT2 592 aa9.09□□□□□ -0.95
RNU6-1090P-201ENST00000364065 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1090P-201ENST00000364065 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
RNU6-1090P-201ENST00000364065 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
RNU6-1090P-201ENST00000364065 BCAMP50895 628 aa9.06□□□□□ -0.96
RNU6-1090P-201ENST00000364065 CDHR5Q9HBB8 845 aa9.06□□□□□ -0.96
RNU6-1090P-201ENST00000364065 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
RNU6-1090P-201ENST00000364065 SMYD5Q6GMV2 418 aa9.05□□□□□ -0.96
RNU6-1090P-201ENST00000364065 TATDN2Q93075 761 aa9.05□□□□□ -0.96
RNU6-1090P-201ENST00000364065 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
RNU6-1090P-201ENST00000364065 MLLT3P42568 568 aaPredicted RBP9.04□□□□□ -0.96
RNU6-1090P-201ENST00000364065 SLC4A3P48751 1232 aa9.04□□□□□ -0.96
RNU6-1090P-201ENST00000364065 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
RNU6-1090P-201ENST00000364065 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
RNU6-1090P-201ENST00000364065 HPS5Q9UPZ3 1129 aa9.02□□□□□ -0.97
RNU6-1090P-201ENST00000364065 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
RNU6-1090P-201ENST00000364065 NUDT18Q6ZVK8 323 aa9.01□□□□□ -0.97
RNU6-1090P-201ENST00000364065 NUTM2FA1L443 756 aa9□□□□□ -0.97
RNU6-1090P-201ENST00000364065 PPP4CP60510 307 aa9□□□□□ -0.97
RNU6-1090P-201ENST00000364065 TTC13Q8NBP0 860 aa9□□□□□ -0.97
RNU6-1090P-201ENST00000364065 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
RNU6-1090P-201ENST00000364065 WBP1LQ9NX94 342 aa9□□□□□ -0.97
RNU6-1090P-201ENST00000364065 SMAPO00193 183 aa8.99□□□□□ -0.97
RNU6-1090P-201ENST00000364065 SEMA3EO15041 775 aa8.99□□□□□ -0.97
RNU6-1090P-201ENST00000364065 SAMD7Q7Z3H4 446 aa8.99□□□□□ -0.97
RNU6-1090P-201ENST00000364065 FAM198AQ9UFP1 575 aa8.99□□□□□ -0.97
RNU6-1090P-201ENST00000364065 FCHSD2O94868 740 aa8.98□□□□□ -0.97
RNU6-1090P-201ENST00000364065 PTGDRQ13258 359 aa8.98□□□□□ -0.97
RNU6-1090P-201ENST00000364065 RGS20O76081 388 aa8.97□□□□□ -0.97
RNU6-1090P-201ENST00000364065 ITGBL1O95965 494 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1090P-201ENST00000364065 VSIG10Q8N0Z9 540 aa8.97□□□□□ -0.97
RNU6-1090P-201ENST00000364065 SLF2Q8IX21 1173 aa8.96□□□□□ -0.98
RNU6-1090P-201ENST00000364065 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1090P-201ENST00000364065 RNF40O75150 1001 aa8.95□□□□□ -0.98
RNU6-1090P-201ENST00000364065 KCNC4Q03721 635 aa8.95□□□□□ -0.98
RNU6-1090P-201ENST00000364065 RBM46Q8TBY0 533 aaKnown RBP8.95□□□□□ -0.98
RNU6-1090P-201ENST00000364065 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
RNU6-1090P-201ENST00000364065 A0A0G2JS52 829 aa8.93□□□□□ -0.98
RNU6-1090P-201ENST00000364065 PRR14Q9BWN1 585 aa8.92□□□□□ -0.98
RNU6-1090P-201ENST00000364065 C3orf80F5H4A9 247 aa8.91□□□□□ -0.98
RNU6-1090P-201ENST00000364065 DNAJB2P25686 324 aa8.91□□□□□ -0.98
RNU6-1090P-201ENST00000364065 HIC1Q14526 733 aa8.91□□□□□ -0.98
RNU6-1090P-201ENST00000364065 EYA1Q99502 592 aa8.91□□□□□ -0.98
RNU6-1090P-201ENST00000364065 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.98
RNU6-1090P-201ENST00000364065 OATP04181 439 aa8.89□□□□□ -0.99
RNU6-1090P-201ENST00000364065 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
RNU6-1090P-201ENST00000364065 ADGRG1Q9Y653 693 aa8.89□□□□□ -0.99
RNU6-1090P-201ENST00000364065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
RNU6-1090P-201ENST00000364065 RBM26Q5T8P6 1007 aaKnown RBP8.86□□□□□ -0.99
RNU6-1090P-201ENST00000364065 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
RNU6-1090P-201ENST00000364065 GNPATO15228 680 aa8.85□□□□□ -0.99
RNU6-1090P-201ENST00000364065 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
RNU6-1090P-201ENST00000364065 TMEM134Q9H6X4 195 aa8.85□□□□□ -0.99
RNU6-1090P-201ENST00000364065 RCCD1A6NED2 376 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms