RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
RNU6-553P-201ENST00000364047 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
RNU6-553P-201ENST00000364047 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
RNU6-553P-201ENST00000364047 MAP3K7O43318 606 aa10.5□□□□□ -0.73
RNU6-553P-201ENST00000364047 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
RNU6-553P-201ENST00000364047 OSBPP22059 807 aa10.49□□□□□ -0.73
RNU6-553P-201ENST00000364047 C6orf132Q5T0Z8 1188 aa10.49□□□□□ -0.73
RNU6-553P-201ENST00000364047 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
RNU6-553P-201ENST00000364047 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
RNU6-553P-201ENST00000364047 PPP1R3GB7ZBB8 358 aa10.46□□□□□ -0.73
RNU6-553P-201ENST00000364047 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
RNU6-553P-201ENST00000364047 TESPA1A2RU30 521 aaPredicted RBP10.45□□□□□ -0.74
RNU6-553P-201ENST00000364047 COL9A1P20849 921 aa10.45□□□□□ -0.74
RNU6-553P-201ENST00000364047 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
RNU6-553P-201ENST00000364047 TK2O00142 265 aa10.44□□□□□ -0.74
RNU6-553P-201ENST00000364047 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
RNU6-553P-201ENST00000364047 ZBED2Q9BTP6 218 aa10.43□□□□□ -0.74
RNU6-553P-201ENST00000364047 VPS9D1Q9Y2B5 631 aa10.42□□□□□ -0.74
RNU6-553P-201ENST00000364047 SLC4A5Q9BY07 1137 aa10.41□□□□□ -0.74
RNU6-553P-201ENST00000364047 SMYD5Q6GMV2 418 aa10.4□□□□□ -0.74
RNU6-553P-201ENST00000364047 CDHR5Q9HBB8 845 aa10.4□□□□□ -0.74
RNU6-553P-201ENST00000364047 PROX2Q3B8N5 592 aa10.39□□□□□ -0.75
RNU6-553P-201ENST00000364047 MMRN1Q13201 1228 aa10.38□□□□□ -0.75
RNU6-553P-201ENST00000364047 HRO43593 1189 aa10.37□□□□□ -0.75
RNU6-553P-201ENST00000364047 CERKQ8TCT0 537 aa10.37□□□□□ -0.75
RNU6-553P-201ENST00000364047 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
RNU6-553P-201ENST00000364047 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
RNU6-553P-201ENST00000364047 MYT1LQ9UL68 1186 aa10.36□□□□□ -0.75
RNU6-553P-201ENST00000364047 RBM26Q5T8P6 1007 aaKnown RBP10.35□□□□□ -0.75
RNU6-553P-201ENST00000364047 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
RNU6-553P-201ENST00000364047 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
RNU6-553P-201ENST00000364047 PRSS12P56730 875 aa10.33□□□□□ -0.76
RNU6-553P-201ENST00000364047 CDCA7LQ96GN5 454 aa10.33□□□□□ -0.76
RNU6-553P-201ENST00000364047 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
RNU6-553P-201ENST00000364047 KIAA1468Q9P260 1216 aa10.33□□□□□ -0.76
RNU6-553P-201ENST00000364047 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
RNU6-553P-201ENST00000364047 NPDC1Q9NQX5 325 aaPredicted RBP10.32□□□□□ -0.76
RNU6-553P-201ENST00000364047 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
RNU6-553P-201ENST00000364047 ONECUT3O60422 494 aaPredicted RBP10.31□□□□□ -0.76
RNU6-553P-201ENST00000364047 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
RNU6-553P-201ENST00000364047 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
RNU6-553P-201ENST00000364047 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
RNU6-553P-201ENST00000364047 PTGDRQ13258 359 aa10.3□□□□□ -0.76
RNU6-553P-201ENST00000364047 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
RNU6-553P-201ENST00000364047 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
RNU6-553P-201ENST00000364047 FCHSD2O94868 740 aa10.28□□□□□ -0.76
RNU6-553P-201ENST00000364047 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
RNU6-553P-201ENST00000364047 PADI6Q6TGC4 694 aa10.27□□□□□ -0.77
RNU6-553P-201ENST00000364047 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
RNU6-553P-201ENST00000364047 GOLGA8CPA6NN73 597 aa10.26□□□□□ -0.77
RNU6-553P-201ENST00000364047 NBPF26B4DH59 902 aa10.25□□□□□ -0.77
RNU6-553P-201ENST00000364047 GPIHBP1Q8IV16 184 aa10.25□□□□□ -0.77
RNU6-553P-201ENST00000364047 LAPTM4BQ86VI4 370 aa10.24□□□□□ -0.77
RNU6-553P-201ENST00000364047 TTC13Q8NBP0 860 aa10.24□□□□□ -0.77
RNU6-553P-201ENST00000364047 KCTD12Q96CX2 325 aaKnown RBP10.24□□□□□ -0.77
RNU6-553P-201ENST00000364047 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
RNU6-553P-201ENST00000364047 C3orf80F5H4A9 247 aa10.22□□□□□ -0.77
RNU6-553P-201ENST00000364047 SMAPO00193 183 aa10.22□□□□□ -0.77
RNU6-553P-201ENST00000364047 GPR37O15354 613 aa10.22□□□□□ -0.77
RNU6-553P-201ENST00000364047 HIC1Q14526 733 aa10.22□□□□□ -0.77
RNU6-553P-201ENST00000364047 FAM98CQ17RN3 349 aaKnown RBP10.22□□□□□ -0.77
RNU6-553P-201ENST00000364047 TATDN2Q93075 761 aa10.22□□□□□ -0.77
RNU6-553P-201ENST00000364047 NUDT18Q6ZVK8 323 aa10.21□□□□□ -0.77
RNU6-553P-201ENST00000364047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNU6-553P-201ENST00000364047 WNT2BQ93097 391 aa10.21□□□□□ -0.77
RNU6-553P-201ENST00000364047 LMOD2Q6P5Q4 547 aa10.2□□□□□ -0.78
RNU6-553P-201ENST00000364047 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
RNU6-553P-201ENST00000364047 ZFRQ96KR1 1074 aaKnown RBP10.2□□□□□ -0.78
RNU6-553P-201ENST00000364047 GNPATO15228 680 aa10.19□□□□□ -0.78
RNU6-553P-201ENST00000364047 FECHP22830 423 aa10.16□□□□□ -0.78
RNU6-553P-201ENST00000364047 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
RNU6-553P-201ENST00000364047 THSD4Q6ZMP0 1018 aa10.16□□□□□ -0.78
RNU6-553P-201ENST00000364047 BCANQ96GW7 911 aa10.16□□□□□ -0.78
RNU6-553P-201ENST00000364047 ADGRG1Q9Y653 693 aa10.16□□□□□ -0.78
RNU6-553P-201ENST00000364047 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
RNU6-553P-201ENST00000364047 BCAMP50895 628 aa10.14□□□□□ -0.79
RNU6-553P-201ENST00000364047 PTPN5P54829 565 aa10.14□□□□□ -0.79
RNU6-553P-201ENST00000364047 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
RNU6-553P-201ENST00000364047 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
RNU6-553P-201ENST00000364047 LRCH3Q96II8 777 aa10.13□□□□□ -0.79
RNU6-553P-201ENST00000364047 EYA1Q99502 592 aa10.13□□□□□ -0.79
RNU6-553P-201ENST00000364047 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.13□□□□□ -0.79
RNU6-553P-201ENST00000364047 SAMD7Q7Z3H4 446 aa10.12□□□□□ -0.79
RNU6-553P-201ENST00000364047 OATP04181 439 aa10.1□□□□□ -0.79
RNU6-553P-201ENST00000364047 HDGFP51858 240 aaKnown RBP10.1□□□□□ -0.79
RNU6-553P-201ENST00000364047 DNAJB2P25686 324 aa10.09□□□□□ -0.79
RNU6-553P-201ENST00000364047 RNF40O75150 1001 aa10.08□□□□□ -0.8
RNU6-553P-201ENST00000364047 MAP2K5Q13163 448 aa10.08□□□□□ -0.8
RNU6-553P-201ENST00000364047 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
RNU6-553P-201ENST00000364047 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
RNU6-553P-201ENST00000364047 HPS5Q9UPZ3 1129 aa10.08□□□□□ -0.8
RNU6-553P-201ENST00000364047 RCCD1A6NED2 376 aa10.07□□□□□ -0.8
RNU6-553P-201ENST00000364047 METTL3Q86U44 580 aaKnown RBP10.07□□□□□ -0.8
RNU6-553P-201ENST00000364047 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
RNU6-553P-201ENST00000364047 WBP1LQ9NX94 342 aa10.06□□□□□ -0.8
RNU6-553P-201ENST00000364047 TSR3Q9UJK0 312 aaKnown RBP10.06□□□□□ -0.8
RNU6-553P-201ENST00000364047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
RNU6-553P-201ENST00000364047 TMEM134Q9H6X4 195 aa10.05□□□□□ -0.8
RNU6-553P-201ENST00000364047 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
RNU6-553P-201ENST00000364047 SLF2Q8IX21 1173 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms