RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 RSPH4AQ5TD94 716 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 C14orf37Q86TY3 774 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 DDX17Q92841 729 aaKnown RBP2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 TRIM52Q96A61 297 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 EID1Q9Y6B2 187 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 MIA2Q96PC5 1412 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 CNTLNQ9NXG0 1405 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 SAMD9LQ8IVG5 1584 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 CDC42BPBQ9Y5S2 1711 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 CCDC18Q5T9S5 1454 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 MBD5Q9P267 1494 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 ABCA6Q8N139 1617 aa2.39□□□□□ -2.03
RNU1-42P-201ENST00000364033 C3P01024 1663 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 SETD1BQ9UPS6 1966 aaKnown RBP2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 NPHP4O75161 1426 aaPredicted RBP2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 PPP1R15AO75807 674 aaPredicted RBP2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 CEP162Q5TB80 1403 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 MEX3CQ5U5Q3 659 aaKnown RBP2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 LRRIQ1Q96JM4 1722 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 CFAP74Q9C0B2 1584 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 MYO5CQ9NQX4 1742 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 SLAIN2Q9P270 581 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 KIAA1107Q9UPP5 1409 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 KIDINS220Q9ULH0 1771 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 PLEKHH2Q8IVE3 1493 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 SHANK2Q9UPX8 1470 aa2.38□□□□□ -2.03
RNU1-42P-201ENST00000364033 CLTCQ00610 1675 aaKnown RBP2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 ABCC1P33527 1531 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 AGLP35573 1532 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 KDM5CP41229 1560 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 CFAP65Q6ZU64 1925 aaKnown RBP2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 NPATQ14207 1427 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 KCNA6P17658 529 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 A2ML1A8K2U0 1454 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 NCOA2Q15596 1464 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 PREX1Q8TCU6 1659 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 ATP7AQ04656 1500 aa2.37□□□□□ -2.03
RNU1-42P-201ENST00000364033 TMEM94Q12767 1356 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 NUTM2FA1L443 756 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 ADAMTS2O95450 1211 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 FOXD1Q16676 465 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 ZNF326Q5BKZ1 582 aaKnown RBP2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 AMOTL2Q9Y2J4 779 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 CAMSAP2Q08AD1 1489 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 TCOF1Q13428 1488 aaKnown RBP2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 FYCO1Q9BQS8 1478 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 CDC42BPAQ5VT25 1732 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 FAM135AQ9P2D6 1515 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 KIF15Q9NS87 1388 aa2.36□□□□□ -2.03
RNU1-42P-201ENST00000364033 DNMT1P26358 1616 aaKnown RBP2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 PREX2Q70Z35 1606 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 RTEL1-TNFRSF6BF6WH68 1400 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 ABCC5O15440 1437 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 ITSN2Q9NZM3 1697 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 CCDC141Q6ZP82 1450 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 ATF3P18847 181 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 XPCQ01831 940 aaPredicted RBP2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 C8orf37Q96NL8 207 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 STK26Q9P289 416 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 LRRC7Q96NW7 1537 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 TIAM1Q13009 1591 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 UGGT1Q9NYU2 1555 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 CEP170BQ9Y4F5 1589 aaPredicted RBP2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 KANK1Q14678 1352 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 TMEM2Q9UHN6 1383 aa2.35□□□□□ -2.03
RNU1-42P-201ENST00000364033 PZPP20742 1482 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 PLA2R1Q13018 1463 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 LRRC9Q6ZRR7 1453 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 RXRBP28702 533 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 HDGFP51858 240 aaKnown RBP2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 RGL3Q3MIN7 710 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 UPF1Q92900 1129 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 NGLY1Q96IV0 654 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 ORAI2Q96SN7 254 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 C19orf44Q9H6X5 657 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 QTRT2Q9H974 415 aaKnown RBP2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 SLC52A1Q9NWF4 448 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 TBX22Q9Y458 520 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 MED1Q15648 1581 aaPredicted RBP2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 REREQ9P2R6 1566 aa2.34□□□□□ -2.03
RNU1-42P-201ENST00000364033 NUP155O75694 1391 aa2.34□□□□□ -2.04
RNU1-42P-201ENST00000364033 ANKRD30AQ9BXX3 1397 aa2.34□□□□□ -2.04
RNU1-42P-201ENST00000364033 MYOM3Q5VTT5 1437 aa2.34□□□□□ -2.04
RNU1-42P-201ENST00000364033 VPS8Q8N3P4 1428 aa2.34□□□□□ -2.04
RNU1-42P-201ENST00000364033 ERVK-7P63135 1459 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 SCAF11Q99590 1463 aaKnown RBP2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 NLRP1Q9C000 1473 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 KDM5DQ9BY66 1539 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 VWDEQ8N2E2 1590 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 NEURL4Q96JN8 1562 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 INO80Q9ULG1 1556 aaPredicted RBP2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 MYO3AQ8NEV4 1616 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 ALKQ9UM73 1620 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 SAFB2Q14151 953 aaKnown RBP eCLIP2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 TMEM132EQ6IEE7 984 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 LMOD2Q6P5Q4 547 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 BRINP3Q76B58 766 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 WAPLQ7Z5K2 1190 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 CADPS2Q86UW7 1296 aa2.33□□□□□ -2.04
RNU1-42P-201ENST00000364033 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms