RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 NBPF3Q9H094 633 aa6.54□□□□□ -1.36
RNU4-90P-201ENST00000362773 SPRYD3Q8NCJ5 442 aa6.53□□□□□ -1.36
RNU4-90P-201ENST00000362773 WNT2BQ93097 391 aa6.53□□□□□ -1.36
RNU4-90P-201ENST00000362773 RABGEF1Q9UJ41 708 aa6.53□□□□□ -1.36
RNU4-90P-201ENST00000362773 C6orf132Q5T0Z8 1188 aa6.52□□□□□ -1.37
RNU4-90P-201ENST00000362773 DDX12PQ92771 950 aa6.52□□□□□ -1.37
RNU4-90P-201ENST00000362773 EPAS1Q99814 870 aa6.52□□□□□ -1.37
RNU4-90P-201ENST00000362773 GOLGA8CPA6NN73 597 aa6.51□□□□□ -1.37
RNU4-90P-201ENST00000362773 PDIA6Q15084 440 aa6.51□□□□□ -1.37
RNU4-90P-201ENST00000362773 RBM33Q96EV2 1170 aaKnown RBP6.49□□□□□ -1.37
RNU4-90P-201ENST00000362773 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.49□□□□□ -1.37
RNU4-90P-201ENST00000362773 KIAA1468Q9P260 1216 aa6.49□□□□□ -1.37
RNU4-90P-201ENST00000362773 ONECUT3O60422 494 aaPredicted RBP6.48□□□□□ -1.37
RNU4-90P-201ENST00000362773 EN1Q05925 392 aaPredicted RBP6.48□□□□□ -1.37
RNU4-90P-201ENST00000362773 IFFO2Q5TF58 517 aa6.48□□□□□ -1.37
RNU4-90P-201ENST00000362773 PAXIP1Q6ZW49 1069 aaPredicted RBP6.48□□□□□ -1.37
RNU4-90P-201ENST00000362773 TRIM6-TRIM34B2RNG4 842 aa6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 PRIM1P49642 420 aaKnown RBP6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 BCAMP50895 628 aa6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 NBR1Q14596 966 aa6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 TSR1Q2NL82 804 aaKnown RBP6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 LAPTM4BQ86VI4 370 aa6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 SEPT9Q9UHD8 586 aaPredicted RBP6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 ARIH1Q9Y4X5 557 aaPredicted RBP6.47□□□□□ -1.37
RNU4-90P-201ENST00000362773 SPDYE16A6NNV3 312 aaPredicted RBP6.46□□□□□ -1.38
RNU4-90P-201ENST00000362773 E2F4Q16254 413 aa6.46□□□□□ -1.38
RNU4-90P-201ENST00000362773 ANKK1Q8NFD2 765 aa6.46□□□□□ -1.38
RNU4-90P-201ENST00000362773 ZFRQ96KR1 1074 aaKnown RBP6.46□□□□□ -1.38
RNU4-90P-201ENST00000362773 SOWAHBA6NEL2 793 aa6.45□□□□□ -1.38
RNU4-90P-201ENST00000362773 TSKSQ9UJT2 592 aa6.45□□□□□ -1.38
RNU4-90P-201ENST00000362773 MAP3K7O43318 606 aa6.44□□□□□ -1.38
RNU4-90P-201ENST00000362773 A0A0G2JS52 829 aa6.43□□□□□ -1.38
RNU4-90P-201ENST00000362773 FAM98CQ17RN3 349 aaKnown RBP6.43□□□□□ -1.38
RNU4-90P-201ENST00000362773 FAM198AQ9UFP1 575 aa6.43□□□□□ -1.38
RNU4-90P-201ENST00000362773 ITGBL1O95965 494 aaPredicted RBP6.42□□□□□ -1.38
RNU4-90P-201ENST00000362773 WBP1LQ9NX94 342 aa6.42□□□□□ -1.38
RNU4-90P-201ENST00000362773 C3orf80F5H4A9 247 aa6.41□□□□□ -1.38
RNU4-90P-201ENST00000362773 WDR70Q9NW82 654 aa6.41□□□□□ -1.38
RNU4-90P-201ENST00000362773 GRXCR2A6NFK2 248 aa6.4□□□□□ -1.38
RNU4-90P-201ENST00000362773 OSBPP22059 807 aa6.4□□□□□ -1.38
RNU4-90P-201ENST00000362773 CDHR5Q9HBB8 845 aa6.4□□□□□ -1.38
RNU4-90P-201ENST00000362773 PRSS12P56730 875 aa6.39□□□□□ -1.39
RNU4-90P-201ENST00000362773 CDCA7LQ96GN5 454 aa6.39□□□□□ -1.39
RNU4-90P-201ENST00000362773 SMAPO00193 183 aa6.38□□□□□ -1.39
RNU4-90P-201ENST00000362773 RGS20O76081 388 aa6.38□□□□□ -1.39
RNU4-90P-201ENST00000362773 NYAP1Q6ZVC0 841 aa6.38□□□□□ -1.39
RNU4-90P-201ENST00000362773 PACS2Q86VP3 889 aa6.38□□□□□ -1.39
RNU4-90P-201ENST00000362773 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.38□□□□□ -1.39
RNU4-90P-201ENST00000362773 LRCH3Q96II8 777 aa6.37□□□□□ -1.39
RNU4-90P-201ENST00000362773 TSR3Q9UJK0 312 aaKnown RBP6.37□□□□□ -1.39
RNU4-90P-201ENST00000362773 HPS5Q9UPZ3 1129 aa6.37□□□□□ -1.39
RNU4-90P-201ENST00000362773 CERKQ8TCT0 537 aa6.36□□□□□ -1.39
RNU4-90P-201ENST00000362773 TSHZ2Q9NRE2 1034 aa6.36□□□□□ -1.39
RNU4-90P-201ENST00000362773 SAMD7Q7Z3H4 446 aa6.35□□□□□ -1.39
RNU4-90P-201ENST00000362773 TATDN2Q93075 761 aa6.35□□□□□ -1.39
RNU4-90P-201ENST00000362773 NPDC1Q9NQX5 325 aaPredicted RBP6.35□□□□□ -1.39
RNU4-90P-201ENST00000362773 TTC13Q8NBP0 860 aa6.34□□□□□ -1.39
RNU4-90P-201ENST00000362773 PNMA3Q9UL41 463 aa6.34□□□□□ -1.39
RNU4-90P-201ENST00000362773 NBPF26B4DH59 902 aa6.33□□□□□ -1.4
RNU4-90P-201ENST00000362773 KCNC4Q03721 635 aa6.33□□□□□ -1.4
RNU4-90P-201ENST00000362773 RBM27Q9P2N5 1060 aaKnown RBP6.33□□□□□ -1.4
RNU4-90P-201ENST00000362773 MLLT3P42568 568 aaPredicted RBP6.32□□□□□ -1.4
RNU4-90P-201ENST00000362773 NUDT18Q6ZVK8 323 aa6.32□□□□□ -1.4
RNU4-90P-201ENST00000362773 KCNV2Q8TDN2 545 aa6.32□□□□□ -1.4
RNU4-90P-201ENST00000362773 PPP4CP60510 307 aa6.31□□□□□ -1.4
RNU4-90P-201ENST00000362773 PADI6Q6TGC4 694 aa6.31□□□□□ -1.4
RNU4-90P-201ENST00000362773 ARHGEF1Q92888 912 aaKnown RBP6.31□□□□□ -1.4
RNU4-90P-201ENST00000362773 TJAP1Q5JTD0 557 aa6.3□□□□□ -1.4
RNU4-90P-201ENST00000362773 IRX2Q9BZI1 471 aaPredicted RBP6.29□□□□□ -1.4
RNU4-90P-201ENST00000362773 APLP1P51693 650 aa6.28□□□□□ -1.4
RNU4-90P-201ENST00000362773 SWT1Q5T5J6 900 aaKnown RBP6.27□□□□□ -1.41
RNU4-90P-201ENST00000362773 EYA1Q99502 592 aa6.27□□□□□ -1.41
RNU4-90P-201ENST00000362773 MTRQ99707 1265 aa6.27□□□□□ -1.41
RNU4-90P-201ENST00000362773 RNF40O75150 1001 aa6.25□□□□□ -1.41
RNU4-90P-201ENST00000362773 PTGDRQ13258 359 aa6.25□□□□□ -1.41
RNU4-90P-201ENST00000362773 ZNF516Q92618 1163 aa6.25□□□□□ -1.41
RNU4-90P-201ENST00000362773 IL21Q9HBE4 155 aa6.24□□□□□ -1.41
RNU4-90P-201ENST00000362773 HDGFP51858 240 aaKnown RBP6.22□□□□□ -1.41
RNU4-90P-201ENST00000362773 PPP1R18Q6NYC8 613 aa6.22□□□□□ -1.41
RNU4-90P-201ENST00000362773 SLF2Q8IX21 1173 aa6.22□□□□□ -1.41
RNU4-90P-201ENST00000362773 NKX2-3Q8TAU0 364 aa6.22□□□□□ -1.41
RNU4-90P-201ENST00000362773 SEMA3EO15041 775 aa6.21□□□□□ -1.42
RNU4-90P-201ENST00000362773 ADGRG1Q9Y653 693 aa6.21□□□□□ -1.42
RNU4-90P-201ENST00000362773 FAM161AQ3B820 660 aa6.2□□□□□ -1.42
RNU4-90P-201ENST00000362773 DNAJB2P25686 324 aa6.19□□□□□ -1.42
RNU4-90P-201ENST00000362773 COPS2P61201 443 aa6.19□□□□□ -1.42
RNU4-90P-201ENST00000362773 P3H3Q8IVL6 736 aa6.19□□□□□ -1.42
RNU4-90P-201ENST00000362773 NECTIN2Q92692 538 aa6.19□□□□□ -1.42
RNU4-90P-201ENST00000362773 TMEM134Q9H6X4 195 aa6.19□□□□□ -1.42
RNU4-90P-201ENST00000362773 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.19□□□□□ -1.42
RNU4-90P-201ENST00000362773 NUTM2FA1L443 756 aa6.18□□□□□ -1.42
RNU4-90P-201ENST00000362773 LCE2BO14633 110 aa6.18□□□□□ -1.42
RNU4-90P-201ENST00000362773 PRKD2Q9BZL6 878 aa6.18□□□□□ -1.42
RNU4-90P-201ENST00000362773 RCCD1A6NED2 376 aa6.17□□□□□ -1.42
RNU4-90P-201ENST00000362773 ZPR1O75312 459 aa6.17□□□□□ -1.42
RNU4-90P-201ENST00000362773 Q6ZNB5 142 aa6.17□□□□□ -1.42
RNU4-90P-201ENST00000362773 RBM46Q8TBY0 533 aaKnown RBP6.17□□□□□ -1.42
RNU4-90P-201ENST00000362773 PLCB2Q00722 1185 aa6.16□□□□□ -1.42
RNU4-90P-201ENST00000362773 BLOC1S3Q6QNY0 202 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms