RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PREX2Q70Z35 1606 aa22.02■■□□□ 1.11
IFT140-201ENST00000361339 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
IFT140-201ENST00000361339 NBPF1Q3BBV0 1214 aa22■■□□□ 1.11
IFT140-201ENST00000361339 FAM135AQ9P2D6 1515 aa22■■□□□ 1.11
IFT140-201ENST00000361339 ARHGEF5Q12774 1597 aa22■■□□□ 1.11
IFT140-201ENST00000361339 RTN4Q9NQC3 1192 aaKnown RBP21.99■■□□□ 1.11
IFT140-201ENST00000361339 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
IFT140-201ENST00000361339 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
IFT140-201ENST00000361339 PLEKHH2Q8IVE3 1493 aa21.98■■□□□ 1.11
IFT140-201ENST00000361339 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
IFT140-201ENST00000361339 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
IFT140-201ENST00000361339 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
IFT140-201ENST00000361339 PLA2R1Q13018 1463 aa21.95■■□□□ 1.1
IFT140-201ENST00000361339 ROCK2O75116 1388 aaKnown RBP21.94■■□□□ 1.1
IFT140-201ENST00000361339 CCDC136Q96JN2 1154 aa21.94■■□□□ 1.1
IFT140-201ENST00000361339 PPP4R2Q9NY27 417 aa21.93■■□□□ 1.1
IFT140-201ENST00000361339 NOP58Q9Y2X3 529 aaKnown RBP21.93■■□□□ 1.1
IFT140-201ENST00000361339 SHROOM2Q13796 1616 aa21.93■■□□□ 1.1
IFT140-201ENST00000361339 ZBED9Q6R2W3 1325 aa21.92■■□□□ 1.1
IFT140-201ENST00000361339 ABCC2Q92887 1545 aa21.91■■□□□ 1.1
IFT140-201ENST00000361339 CCDC144AA2RUR9 1427 aa21.91■■□□□ 1.1
IFT140-201ENST00000361339 SALL2Q9Y467 1007 aaPredicted RBP21.9■■□□□ 1.1
IFT140-201ENST00000361339 AFAP1Q8N556 730 aa21.87■■□□□ 1.09
IFT140-201ENST00000361339 RSPH4AQ5TD94 716 aa21.87■■□□□ 1.09
IFT140-201ENST00000361339 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
IFT140-201ENST00000361339 PRAG1Q86YV5 1406 aa21.85■■□□□ 1.09
IFT140-201ENST00000361339 A2MP01023 1474 aa21.85■■□□□ 1.09
IFT140-201ENST00000361339 TMC1Q8TDI8 760 aa21.83■■□□□ 1.09
IFT140-201ENST00000361339 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
IFT140-201ENST00000361339 MYO5CQ9NQX4 1742 aa21.83■■□□□ 1.08
IFT140-201ENST00000361339 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.08
IFT140-201ENST00000361339 IL27Q8NEV9 243 aa21.82■■□□□ 1.08
IFT140-201ENST00000361339 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
IFT140-201ENST00000361339 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
IFT140-201ENST00000361339 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.8■■□□□ 1.08
IFT140-201ENST00000361339 PLCH2O75038 1416 aa21.8■■□□□ 1.08
IFT140-201ENST00000361339 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
IFT140-201ENST00000361339 UNC13BO14795 1591 aa21.79■■□□□ 1.08
IFT140-201ENST00000361339 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
IFT140-201ENST00000361339 DISP3Q9P2K9 1392 aa21.78■■□□□ 1.08
IFT140-201ENST00000361339 MAST1Q9Y2H9 1570 aa21.77■■□□□ 1.08
IFT140-201ENST00000361339 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
IFT140-201ENST00000361339 TRPM1Q7Z4N2 1603 aa21.77■■□□□ 1.08
IFT140-201ENST00000361339 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
IFT140-201ENST00000361339 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
IFT140-201ENST00000361339 TESK2Q96S53 571 aa21.75■■□□□ 1.07
IFT140-201ENST00000361339 PLXNC1O60486 1568 aa21.73■■□□□ 1.07
IFT140-201ENST00000361339 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
IFT140-201ENST00000361339 DUOX2Q9NRD8 1548 aa21.72■■□□□ 1.07
IFT140-201ENST00000361339 IQGAP3Q86VI3 1631 aa21.72■■□□□ 1.07
IFT140-201ENST00000361339 ZBTB47Q9UFB7 747 aaPredicted RBP21.72■■□□□ 1.07
IFT140-201ENST00000361339 ANP32AP39687 249 aaKnown RBP21.71■■□□□ 1.07
IFT140-201ENST00000361339 ABCC1P33527 1531 aa21.71■■□□□ 1.07
IFT140-201ENST00000361339 MYBBP1AQ9BQG0 1328 aaKnown RBP21.7■■□□□ 1.07
IFT140-201ENST00000361339 NUDCQ9Y266 331 aa21.7■■□□□ 1.06
IFT140-201ENST00000361339 PER1O15534 1290 aaPredicted RBP21.7■■□□□ 1.06
IFT140-201ENST00000361339 PANK3Q9H999 370 aa21.69■■□□□ 1.06
IFT140-201ENST00000361339 SMG6Q86US8 1419 aaKnown RBP21.68■■□□□ 1.06
IFT140-201ENST00000361339 LAS1LQ9Y4W2 734 aaKnown RBP21.68■■□□□ 1.06
IFT140-201ENST00000361339 ERBINQ96RT1 1412 aa21.67■■□□□ 1.06
IFT140-201ENST00000361339 E9PCH4 1651 aa21.66■■□□□ 1.06
IFT140-201ENST00000361339 GPRASP1Q5JY77 1395 aa21.66■■□□□ 1.06
IFT140-201ENST00000361339 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
IFT140-201ENST00000361339 LRPPRCP42704 1394 aaKnown RBP21.64■■□□□ 1.05
IFT140-201ENST00000361339 RALBP1Q15311 655 aa21.64■■□□□ 1.05
IFT140-201ENST00000361339 UHRF1BP1LA0JNW5 1464 aa21.63■■□□□ 1.05
IFT140-201ENST00000361339 KIF3BO15066 747 aa21.63■■□□□ 1.05
IFT140-201ENST00000361339 IPO9Q96P70 1041 aaKnown RBP21.63■■□□□ 1.05
IFT140-201ENST00000361339 COL17A1Q9UMD9 1497 aaPredicted RBP21.63■■□□□ 1.05
IFT140-201ENST00000361339 BRD4O60885 1362 aaPredicted RBP21.62■■□□□ 1.05
IFT140-201ENST00000361339 KTN1Q86UP2 1357 aaKnown RBP21.62■■□□□ 1.05
IFT140-201ENST00000361339 PRDM15P57071 1507 aaPredicted RBP21.62■■□□□ 1.05
IFT140-201ENST00000361339 ERICH6BQ5W0A0 696 aa21.61■■□□□ 1.05
IFT140-201ENST00000361339 PARD3Q8TEW0 1356 aa21.61■■□□□ 1.05
IFT140-201ENST00000361339 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
IFT140-201ENST00000361339 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
IFT140-201ENST00000361339 ATP10AO60312 1499 aa21.6■■□□□ 1.05
IFT140-201ENST00000361339 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
IFT140-201ENST00000361339 NLRP13Q86W25 1043 aa21.59■■□□□ 1.05
IFT140-201ENST00000361339 FANCAO15360 1455 aa21.58■■□□□ 1.04
IFT140-201ENST00000361339 TMF1P82094 1093 aa21.57■■□□□ 1.04
IFT140-201ENST00000361339 UGGT1Q9NYU2 1555 aa21.57■■□□□ 1.04
IFT140-201ENST00000361339 WDR7Q9Y4E6 1490 aa21.56■■□□□ 1.04
IFT140-201ENST00000361339 RNF123Q5XPI4 1314 aa21.54■■□□□ 1.04
IFT140-201ENST00000361339 NEFMP07197 916 aa21.53■■□□□ 1.04
IFT140-201ENST00000361339 CLTCL1P53675 1640 aa21.53■■□□□ 1.04
IFT140-201ENST00000361339 ADGRL1O94910 1474 aa21.51■■□□□ 1.03
IFT140-201ENST00000361339 CFAP70Q5T0N1 1121 aa21.5■■□□□ 1.03
IFT140-201ENST00000361339 MADDQ8WXG6 1647 aa21.5■■□□□ 1.03
IFT140-201ENST00000361339 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
IFT140-201ENST00000361339 ASXL2Q76L83 1435 aa21.49■■□□□ 1.03
IFT140-201ENST00000361339 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
IFT140-201ENST00000361339 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
IFT140-201ENST00000361339 RTEL1-TNFRSF6BF6WH68 1400 aa21.49■■□□□ 1.03
IFT140-201ENST00000361339 ADGRF5Q8IZF2 1346 aa21.48■■□□□ 1.03
IFT140-201ENST00000361339 TRPM2O94759 1503 aa21.47■■□□□ 1.03
IFT140-201ENST00000361339 RNF17Q9BXT8 1623 aaKnown RBP21.47■■□□□ 1.03
IFT140-201ENST00000361339 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
IFT140-201ENST00000361339 LAMC1P11047 1609 aa21.47■■□□□ 1.03
IFT140-201ENST00000361339 PLIN1O60240 522 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms