RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 CCAR2Q8N163 923 aaKnown RBP10.34□□□□□ -0.75
CTNND1-202ENST00000361332 CCDC97Q96F63 343 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-202ENST00000361332 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
CTNND1-202ENST00000361332 GSE1Q14687 1217 aa10.33□□□□□ -0.76
CTNND1-202ENST00000361332 CT47A1Q5JQC4 288 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-202ENST00000361332 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
CTNND1-202ENST00000361332 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
CTNND1-202ENST00000361332 NOL8Q76FK4 1167 aaKnown RBP10.33□□□□□ -0.76
CTNND1-202ENST00000361332 PKNOX2Q96KN3 472 aa10.32□□□□□ -0.76
CTNND1-202ENST00000361332 VPS8Q8N3P4 1428 aa10.32□□□□□ -0.76
CTNND1-202ENST00000361332 ZFYVE27Q5T4F4 411 aa10.32□□□□□ -0.76
CTNND1-202ENST00000361332 MORC1Q86VD1 984 aa10.31□□□□□ -0.76
CTNND1-202ENST00000361332 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
CTNND1-202ENST00000361332 FAM13BQ9NYF5 915 aa10.31□□□□□ -0.76
CTNND1-202ENST00000361332 HDGFL2Q7Z4V5 671 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-202ENST00000361332 LTV1Q96GA3 475 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-202ENST00000361332 CCDC70Q6NSX1 233 aa10.3□□□□□ -0.76
CTNND1-202ENST00000361332 APPP05067 770 aa10.29□□□□□ -0.76
CTNND1-202ENST00000361332 BAZ1AQ9NRL2 1556 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-202ENST00000361332 SYTL4Q96C24 671 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-202ENST00000361332 VPS37DQ86XT2 251 aa10.28□□□□□ -0.76
CTNND1-202ENST00000361332 PODXL2Q9NZ53 605 aa10.28□□□□□ -0.76
CTNND1-202ENST00000361332 SPAG9O60271 1321 aaKnown RBP10.28□□□□□ -0.76
CTNND1-202ENST00000361332 NACADO15069 1562 aa10.28□□□□□ -0.76
CTNND1-202ENST00000361332 TPM1P09493 284 aa10.28□□□□□ -0.76
CTNND1-202ENST00000361332 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-202ENST00000361332 SLC4A10Q6U841 1118 aa10.28□□□□□ -0.76
CTNND1-202ENST00000361332 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.76
CTNND1-202ENST00000361332 SYNE3Q6ZMZ3 975 aa10.27□□□□□ -0.76
CTNND1-202ENST00000361332 CCDC88BA6NC98 1476 aa10.27□□□□□ -0.77
CTNND1-202ENST00000361332 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
CTNND1-202ENST00000361332 CFDP1Q9UEE9 299 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-202ENST00000361332 ABCC8Q09428 1581 aa10.27□□□□□ -0.77
CTNND1-202ENST00000361332 SETD5Q9C0A6 1442 aa10.26□□□□□ -0.77
CTNND1-202ENST00000361332 SLC4A3P48751 1232 aa10.26□□□□□ -0.77
CTNND1-202ENST00000361332 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
CTNND1-202ENST00000361332 CCDC47Q96A33 483 aaKnown RBP10.26□□□□□ -0.77
CTNND1-202ENST00000361332 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
CTNND1-202ENST00000361332 HDAC5Q9UQL6 1122 aa10.26□□□□□ -0.77
CTNND1-202ENST00000361332 GGT6Q6P531 493 aa10.26□□□□□ -0.77
CTNND1-202ENST00000361332 IPO8O15397 1037 aaKnown RBP10.25□□□□□ -0.77
CTNND1-202ENST00000361332 PHF14O94880 888 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 IBSPP21815 317 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-202ENST00000361332 CHMP4AQ9BY43 222 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 DDX11L8A8MPP1 907 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 H3BQV1 296 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 GPS2Q13227 327 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 IFFO2Q5TF58 517 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 KANK1Q14678 1352 aa10.25□□□□□ -0.77
CTNND1-202ENST00000361332 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
CTNND1-202ENST00000361332 RWDD1Q9H446 243 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-202ENST00000361332 HSP90AB2PQ58FF8 381 aa10.24□□□□□ -0.77
CTNND1-202ENST00000361332 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
CTNND1-202ENST00000361332 MROH2BQ7Z745 1585 aa10.24□□□□□ -0.77
CTNND1-202ENST00000361332 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
CTNND1-202ENST00000361332 TEX35Q5T0J7 233 aa10.24□□□□□ -0.77
CTNND1-202ENST00000361332 NGEFQ8N5V2 710 aa10.24□□□□□ -0.77
CTNND1-202ENST00000361332 NAP1L1P55209 391 aaKnown RBP10.23□□□□□ -0.77
CTNND1-202ENST00000361332 KIF3AQ9Y496 699 aa10.23□□□□□ -0.77
CTNND1-202ENST00000361332 HSPA5P11021 654 aaKnown RBP10.23□□□□□ -0.77
CTNND1-202ENST00000361332 KIF16BQ96L93 1317 aa10.23□□□□□ -0.77
CTNND1-202ENST00000361332 IPO7O95373 1038 aaKnown RBP10.23□□□□□ -0.77
CTNND1-202ENST00000361332 IKQ13123 557 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-202ENST00000361332 EID1Q9Y6B2 187 aa10.22□□□□□ -0.77
CTNND1-202ENST00000361332 RAB3GAP2Q9H2M9 1393 aa10.22□□□□□ -0.77
CTNND1-202ENST00000361332 AMPHP49418 695 aa10.22□□□□□ -0.77
CTNND1-202ENST00000361332 FOXD1Q16676 465 aa10.22□□□□□ -0.77
CTNND1-202ENST00000361332 FOXD4L5Q5VV16 416 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-202ENST00000361332 FOXD4L4Q8WXT5 416 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-202ENST00000361332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-202ENST00000361332 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-202ENST00000361332 FAM184AQ8NB25 1140 aa10.22□□□□□ -0.77
CTNND1-202ENST00000361332 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
CTNND1-202ENST00000361332 TMF1P82094 1093 aa10.21□□□□□ -0.77
CTNND1-202ENST00000361332 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.77
CTNND1-202ENST00000361332 NUTM2FA1L443 756 aa10.21□□□□□ -0.77
CTNND1-202ENST00000361332 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.77
CTNND1-202ENST00000361332 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
CTNND1-202ENST00000361332 HMMRO75330 724 aa10.2□□□□□ -0.78
CTNND1-202ENST00000361332 TRIM29Q14134 588 aa10.2□□□□□ -0.78
CTNND1-202ENST00000361332 MCTP1Q6DN14 999 aa10.2□□□□□ -0.78
CTNND1-202ENST00000361332 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
CTNND1-202ENST00000361332 U2AF1L5P0DN76 240 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-202ENST00000361332 U2AF1Q01081 240 aaKnown RBP eCLIP10.2□□□□□ -0.782e-10■■□□□ 12.3
CTNND1-202ENST00000361332 SKOR2Q2VWA4 1001 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-202ENST00000361332 NOM1Q5C9Z4 860 aaKnown RBP10.2□□□□□ -0.78
CTNND1-202ENST00000361332 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-202ENST00000361332 PMFBP1Q8TBY8 1022 aa10.19□□□□□ -0.78
CTNND1-202ENST00000361332 ANKRD20A12PQ8NF67 263 aa10.19□□□□□ -0.78
CTNND1-202ENST00000361332 MTMR7Q9Y216 660 aa10.19□□□□□ -0.78
CTNND1-202ENST00000361332 FYB1O15117 783 aa10.19□□□□□ -0.78
CTNND1-202ENST00000361332 RDXP35241 583 aaKnown RBP10.18□□□□□ -0.78
CTNND1-202ENST00000361332 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-202ENST00000361332 EPS15P42566 896 aa10.18□□□□□ -0.78
CTNND1-202ENST00000361332 HOMER1Q86YM7 354 aa10.18□□□□□ -0.78
CTNND1-202ENST00000361332 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
CTNND1-202ENST00000361332 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
CTNND1-202ENST00000361332 CDR1P51861 262 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms